RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 GDF5OSQ5U4N7 250 aa10.03□□□□□ -0.8
VRK3-205ENST00000593919 TMEM75Q8N9X5 138 aa10.03□□□□□ -0.8
VRK3-205ENST00000593919 SMPXQ9UHP9 88 aa10.03□□□□□ -0.8
VRK3-205ENST00000593919 A8MWL6 223 aa10.02□□□□□ -0.81
VRK3-205ENST00000593919 CAMPP49913 170 aa10.02□□□□□ -0.81
VRK3-205ENST00000593919 PRR31Q5SQ13 230 aa10.02□□□□□ -0.81
VRK3-205ENST00000593919 RASL11AQ6T310 242 aa10.02□□□□□ -0.81
VRK3-205ENST00000593919 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.02□□□□□ -0.81
VRK3-205ENST00000593919 RAX2Q96IS3 184 aa10.02□□□□□ -0.81
VRK3-205ENST00000593919 AAMDCQ9H7C9 122 aa10.02□□□□□ -0.81
VRK3-205ENST00000593919 TRBV6-1A0A0K0K1D8 114 aa10.01□□□□□ -0.81
VRK3-205ENST00000593919 DIRC3C9JPN6 131 aa10.01□□□□□ -0.81
VRK3-205ENST00000593919 ZNF253O75346 499 aa10.01□□□□□ -0.81
VRK3-205ENST00000593919 PSG3Q16557 428 aa10.01□□□□□ -0.81
VRK3-205ENST00000593919 GTSF1Q8WW33 167 aa10.01□□□□□ -0.81
VRK3-205ENST00000593919 ZC2HC1AQ96GY0 325 aa10.01□□□□□ -0.81
VRK3-205ENST00000593919 PGLYRP4Q96LB8 373 aa10.01□□□□□ -0.81
VRK3-205ENST00000593919 SSBP4Q9BWG4 385 aaPredicted RBP10.01□□□□□ -0.81
VRK3-205ENST00000593919 PSG8Q9UQ74 426 aa10.01□□□□□ -0.81
VRK3-205ENST00000593919 SELENOKQ9Y6D0 94 aa10.01□□□□□ -0.81
VRK3-205ENST00000593919 SORL1Q92673 2214 aa10.01□□□□□ -0.81
VRK3-205ENST00000593919 ESDP10768 282 aa10.01□□□□□ -0.81
VRK3-205ENST00000593919 DDTP30046 118 aa10.01□□□□□ -0.81
VRK3-205ENST00000593919 KRTAP10-3P60369 221 aa10.01□□□□□ -0.81
VRK3-205ENST00000593919 PSG9Q00887 426 aa10.01□□□□□ -0.81
VRK3-205ENST00000593919 FHL3Q13643 280 aa10.01□□□□□ -0.81
VRK3-205ENST00000593919 CT83Q5H943 113 aa10.01□□□□□ -0.81
VRK3-205ENST00000593919 OR10J3Q5JRS4 329 aa10.01□□□□□ -0.81
VRK3-205ENST00000593919 IGFL4Q6B9Z1 124 aa10.01□□□□□ -0.81
VRK3-205ENST00000593919 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.01□□□□□ -0.81
VRK3-205ENST00000593919 SAMD10Q9BYL1 202 aa10.01□□□□□ -0.81
VRK3-205ENST00000593919 C2orf70A6NJV1 201 aa10□□□□□ -0.81
VRK3-205ENST00000593919 PKIAP61925 76 aa10□□□□□ -0.81
VRK3-205ENST00000593919 PAFAH1B2P68402 229 aa10□□□□□ -0.81
VRK3-205ENST00000593919 ATP5L2Q7Z4Y8 100 aa10□□□□□ -0.81
VRK3-205ENST00000593919 OR2D3Q8NGH3 330 aa10□□□□□ -0.81
VRK3-205ENST00000593919 DLX4Q92988 240 aaPredicted RBP10□□□□□ -0.81
VRK3-205ENST00000593919 RCHY1Q96PM5 261 aa10□□□□□ -0.81
VRK3-205ENST00000593919 A0A1B0GXF2 115 aa9.99□□□□□ -0.81
VRK3-205ENST00000593919 ADARB2-AS1A8MUL3 147 aa9.99□□□□□ -0.81
VRK3-205ENST00000593919 NPIPB6E9PJ23 425 aa9.99□□□□□ -0.81
VRK3-205ENST00000593919 CCL24O00175 119 aa9.99□□□□□ -0.81
VRK3-205ENST00000593919 HLA-DMBP28068 263 aa9.99□□□□□ -0.81
VRK3-205ENST00000593919 CSN1S1P47710 185 aa9.99□□□□□ -0.81
VRK3-205ENST00000593919 RPL11P62913 178 aaKnown RBP9.99□□□□□ -0.81
VRK3-205ENST00000593919 HBBP68871 147 aa9.99□□□□□ -0.81
VRK3-205ENST00000593919 IQCJQ1A5X6 159 aa9.99□□□□□ -0.81
VRK3-205ENST00000593919 SLC50A1Q9BRV3 221 aa9.99□□□□□ -0.81
VRK3-205ENST00000593919 ZFP30Q9Y2G7 519 aa9.99□□□□□ -0.81
VRK3-205ENST00000593919 VWFP04275 2813 aa9.99□□□□□ -0.81
VRK3-205ENST00000593919 TSTD3H0UI37 97 aa9.99□□□□□ -0.81
VRK3-205ENST00000593919 CD33P20138 364 aa9.99□□□□□ -0.81
VRK3-205ENST00000593919 BMI1P35226 326 aa9.99□□□□□ -0.81
VRK3-205ENST00000593919 Q6ZWC4 215 aa9.99□□□□□ -0.81
VRK3-205ENST00000593919 OR4B1Q8NGF8 309 aa9.99□□□□□ -0.81
VRK3-205ENST00000593919 OR9G4Q8NGQ1 327 aa9.99□□□□□ -0.81
VRK3-205ENST00000593919 C8orf49Q96NF6 230 aa9.99□□□□□ -0.81
VRK3-205ENST00000593919 C2orf88Q9BSF0 95 aa9.99□□□□□ -0.81
VRK3-205ENST00000593919 IGKV3-7A0A075B6H7 116 aa9.98□□□□□ -0.81
VRK3-205ENST00000593919 IGKV2-40A0A087WW87 121 aaPredicted RBP9.98□□□□□ -0.81
VRK3-205ENST00000593919 IGKV2D-40P01614 121 aaPredicted RBP9.98□□□□□ -0.81
VRK3-205ENST00000593919 NSUN5P1Q3KNT7 163 aa9.98□□□□□ -0.81
VRK3-205ENST00000593919 ADAMTSL5Q6ZMM2 481 aa9.98□□□□□ -0.81
VRK3-205ENST00000593919 RBPMS2Q6ZRY4 209 aaKnown RBP9.98□□□□□ -0.81
VRK3-205ENST00000593919 RNF182Q8N6D2 247 aa9.98□□□□□ -0.81
VRK3-205ENST00000593919 KCNS1Q96KK3 526 aa9.98□□□□□ -0.81
VRK3-205ENST00000593919 SPXQ9BT56 116 aa9.98□□□□□ -0.81
VRK3-205ENST00000593919 GFRA4Q9GZZ7 299 aa9.98□□□□□ -0.81
VRK3-205ENST00000593919 NRN1Q9NPD7 142 aa9.98□□□□□ -0.81
VRK3-205ENST00000593919 NAGKQ9UJ70 344 aa9.98□□□□□ -0.81
VRK3-205ENST00000593919 TRAV8-2A0A0B4J237 113 aa9.97□□□□□ -0.81
VRK3-205ENST00000593919 PMCHP20382 165 aa9.97□□□□□ -0.81
VRK3-205ENST00000593919 ZNF664Q8N3J9 261 aa9.97□□□□□ -0.81
VRK3-205ENST00000593919 PEMTQ9UBM1 199 aa9.97□□□□□ -0.81
VRK3-205ENST00000593919 ZNF705FA8MVS1 300 aaPredicted RBP9.97□□□□□ -0.81
VRK3-205ENST00000593919 SOCS3O14543 225 aa9.97□□□□□ -0.81
VRK3-205ENST00000593919 ZNF705DP0CH99 300 aaPredicted RBP9.97□□□□□ -0.81
VRK3-205ENST00000593919 ZNF705BP0CI00 300 aaPredicted RBP9.97□□□□□ -0.81
VRK3-205ENST00000593919 C18orf32Q8TCD1 76 aa9.97□□□□□ -0.81
VRK3-205ENST00000593919 C16orf92Q96LL3 132 aa9.97□□□□□ -0.81
VRK3-205ENST00000593919 FBN1P35555 2871 aaKnown RBP9.97□□□□□ -0.81
VRK3-205ENST00000593919 AMTP48728 403 aa9.96□□□□□ -0.81
VRK3-205ENST00000593919 M0QZ24 198 aa9.95□□□□□ -0.82
VRK3-205ENST00000593919 GPX1P07203 203 aa9.95□□□□□ -0.82
VRK3-205ENST00000593919 CT45A10P0DMU9 189 aa9.95□□□□□ -0.82
VRK3-205ENST00000593919 CRIP1P50238 77 aa9.95□□□□□ -0.82
VRK3-205ENST00000593919 LCN12Q6JVE5 192 aa9.95□□□□□ -0.82
VRK3-205ENST00000593919 NDUFA11Q86Y39 141 aa9.95□□□□□ -0.82
VRK3-205ENST00000593919 ALKBH7Q9BT30 221 aaPredicted RBP9.95□□□□□ -0.82
VRK3-205ENST00000593919 TRRAPQ9Y4A5 3859 aa9.95□□□□□ -0.82
VRK3-205ENST00000593919 SERTM2A0A1B0GWG4 89 aa9.95□□□□□ -0.82
VRK3-205ENST00000593919 FAM231BA6NCW3 169 aa9.95□□□□□ -0.82
VRK3-205ENST00000593919 CSN3P07498 182 aa9.95□□□□□ -0.82
VRK3-205ENST00000593919 LBHQ53QV2 105 aaPredicted RBP9.95□□□□□ -0.82
VRK3-205ENST00000593919 ZNF324O75467 553 aaPredicted RBP9.94□□□□□ -0.82
VRK3-205ENST00000593919 NTF3P20783 257 aa9.94□□□□□ -0.82
VRK3-205ENST00000593919 PET117Q6UWS5 81 aa9.94□□□□□ -0.82
VRK3-205ENST00000593919 FAM19A2Q8N3H0 131 aa9.94□□□□□ -0.82
VRK3-205ENST00000593919 Q8TAT8 98 aa9.94□□□□□ -0.82
VRK3-205ENST00000593919 DCANP1Q8TF63 244 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms