RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 HLA-DRB4P13762 266 aa12.94□□□□□ -0.34
CXXC1-212ENST00000589940 CMC4P56277 68 aaPredicted RBP12.94□□□□□ -0.34
CXXC1-212ENST00000589940 ACTL10Q5JWF8 245 aa12.94□□□□□ -0.34
CXXC1-212ENST00000589940 ODF3Q96PU9 254 aa12.94□□□□□ -0.34
CXXC1-212ENST00000589940 HLA-DRB4X5D2U9 266 aa12.94□□□□□ -0.34
CXXC1-212ENST00000589940 KNCNA6PVL3 124 aa12.94□□□□□ -0.34
CXXC1-212ENST00000589940 OR11H12B2RN74 326 aa12.94□□□□□ -0.34
CXXC1-212ENST00000589940 CRISP2P16562 243 aa12.94□□□□□ -0.34
CXXC1-212ENST00000589940 ZFAND2AQ8N6M9 145 aa12.94□□□□□ -0.34
CXXC1-212ENST00000589940 OR4B1Q8NGF8 309 aa12.94□□□□□ -0.34
CXXC1-212ENST00000589940 URGCP-MRPS24S4R325 110 aa12.94□□□□□ -0.34
CXXC1-212ENST00000589940 SH2D1AO60880 128 aa12.93□□□□□ -0.34
CXXC1-212ENST00000589940 ZNF124Q15973 351 aa12.93□□□□□ -0.34
CXXC1-212ENST00000589940 APRG1Q8IVJ8 170 aa12.93□□□□□ -0.34
CXXC1-212ENST00000589940 IMMP2LQ96T52 175 aa12.93□□□□□ -0.34
CXXC1-212ENST00000589940 FAM110AQ9BQ89 295 aa12.93□□□□□ -0.34
CXXC1-212ENST00000589940 RPP21Q9H633 154 aaKnown RBP12.93□□□□□ -0.34
CXXC1-212ENST00000589940 H3BMM0 161 aa12.93□□□□□ -0.34
CXXC1-212ENST00000589940 FABP5P3A8MUU1 101 aa12.92□□□□□ -0.34
CXXC1-212ENST00000589940 IGKV3-20P01619 116 aa12.92□□□□□ -0.34
CXXC1-212ENST00000589940 PFN1P07737 140 aaKnown RBP12.92□□□□□ -0.34
CXXC1-212ENST00000589940 CT83Q5H943 113 aa12.92□□□□□ -0.34
CXXC1-212ENST00000589940 PRR9Q5T870 116 aa12.92□□□□□ -0.34
CXXC1-212ENST00000589940 YPEL4Q96NS1 127 aa12.92□□□□□ -0.34
CXXC1-212ENST00000589940 IL36BQ9NZH7 164 aa12.92□□□□□ -0.34
CXXC1-212ENST00000589940 A8MTW9 85 aa12.92□□□□□ -0.34
CXXC1-212ENST00000589940 CA1P00915 261 aaPredicted RBP12.92□□□□□ -0.34
CXXC1-212ENST00000589940 S100PP25815 95 aa12.92□□□□□ -0.34
CXXC1-212ENST00000589940 ELOBQ15370 118 aa12.92□□□□□ -0.34
CXXC1-212ENST00000589940 CMYA5Q8N3K9 4069 aa12.91□□□□□ -0.34
CXXC1-212ENST00000589940 GPX1P07203 203 aa12.91□□□□□ -0.34
CXXC1-212ENST00000589940 CD7P09564 240 aa12.91□□□□□ -0.34
CXXC1-212ENST00000589940 IGLL1P15814 213 aa12.91□□□□□ -0.34
CXXC1-212ENST00000589940 LEPP41159 167 aa12.91□□□□□ -0.34
CXXC1-212ENST00000589940 KCNIP4Q6PIL6 250 aa12.91□□□□□ -0.34
CXXC1-212ENST00000589940 KLLNB2CW77 178 aa12.9□□□□□ -0.34
CXXC1-212ENST00000589940 J3KRW8 73 aa12.9□□□□□ -0.34
CXXC1-212ENST00000589940 AMTNQ6UX39 209 aa12.9□□□□□ -0.34
CXXC1-212ENST00000589940 OR2D3Q8NGH3 330 aa12.9□□□□□ -0.34
CXXC1-212ENST00000589940 AGRNO00468 2067 aa12.9□□□□□ -0.34
CXXC1-212ENST00000589940 WIPF1O43516 503 aa12.9□□□□□ -0.34
CXXC1-212ENST00000589940 TSKUQ8WUA8 353 aa12.9□□□□□ -0.34
CXXC1-212ENST00000589940 SMIM27A0A1W2PRY6 76 aa12.89□□□□□ -0.35
CXXC1-212ENST00000589940 COLCA2A8K830 154 aa12.89□□□□□ -0.35
CXXC1-212ENST00000589940 TSPOP30536 169 aa12.89□□□□□ -0.35
CXXC1-212ENST00000589940 FAM3BP58499 235 aaPredicted RBP12.89□□□□□ -0.35
CXXC1-212ENST00000589940 C19orf73Q9NVV2 129 aa12.89□□□□□ -0.35
CXXC1-212ENST00000589940 A8MWL6 223 aa12.89□□□□□ -0.35
CXXC1-212ENST00000589940 RNASE4P34096 147 aaKnown RBP12.89□□□□□ -0.35
CXXC1-212ENST00000589940 KIR3DS1Q14943 382 aa12.89□□□□□ -0.35
CXXC1-212ENST00000589940 CDKN1BP46527 198 aa12.88□□□□□ -0.35
CXXC1-212ENST00000589940 RPL19P84098 196 aaKnown RBP12.88□□□□□ -0.35
CXXC1-212ENST00000589940 Q6AWC8 147 aa12.88□□□□□ -0.35
CXXC1-212ENST00000589940 CLUHP3Q96NS8 147 aa12.88□□□□□ -0.35
CXXC1-212ENST00000589940 TRAV21A0A0B4J279 112 aa12.88□□□□□ -0.35
CXXC1-212ENST00000589940 A0A1W2PPQ1 181 aa12.88□□□□□ -0.35
CXXC1-212ENST00000589940 TMEM189A5PLL7 270 aa12.88□□□□□ -0.35
CXXC1-212ENST00000589940 M0R2Z0 102 aa12.88□□□□□ -0.35
CXXC1-212ENST00000589940 STHQ8IWL8 128 aa12.88□□□□□ -0.35
CXXC1-212ENST00000589940 PKD1L1Q8TDX9 2849 aa12.87□□□□□ -0.35
CXXC1-212ENST00000589940 TRBV24-1A0A075B6N3 115 aa12.87□□□□□ -0.35
CXXC1-212ENST00000589940 TGIF2-C20orf24A0A0A6YYL0 155 aa12.87□□□□□ -0.35
CXXC1-212ENST00000589940 RBMY1BA6NDE4 496 aaKnown RBP12.87□□□□□ -0.35
CXXC1-212ENST00000589940 RBMY1EA6NEQ0 496 aaKnown RBP12.87□□□□□ -0.35
CXXC1-212ENST00000589940 ORM1P02763 201 aa12.87□□□□□ -0.35
CXXC1-212ENST00000589940 RBMY1DP0C7P1 496 aaKnown RBP12.87□□□□□ -0.35
CXXC1-212ENST00000589940 TCL1AP56279 114 aa12.87□□□□□ -0.35
CXXC1-212ENST00000589940 SPINK13Q1W4C9 94 aa12.87□□□□□ -0.35
CXXC1-212ENST00000589940 LINC01559Q495D7 138 aa12.87□□□□□ -0.35
CXXC1-212ENST00000589940 NEU1Q99519 415 aa12.87□□□□□ -0.35
CXXC1-212ENST00000589940 GFRA4Q9GZZ7 299 aa12.87□□□□□ -0.35
CXXC1-212ENST00000589940 Q6ZQT7 251 aa12.86□□□□□ -0.35
CXXC1-212ENST00000589940 GTSCR1Q86UQ5 136 aa12.86□□□□□ -0.35
CXXC1-212ENST00000589940 LURAP1LQ8IV03 231 aa12.86□□□□□ -0.35
CXXC1-212ENST00000589940 C11orf21Q9P2W6 132 aa12.86□□□□□ -0.35
CXXC1-212ENST00000589940 XKRY2A2RUG3 117 aa12.86□□□□□ -0.35
CXXC1-212ENST00000589940 FAM231BA6NCW3 169 aa12.86□□□□□ -0.35
CXXC1-212ENST00000589940 CXCL1P09341 107 aa12.86□□□□□ -0.35
CXXC1-212ENST00000589940 GFI1BQ5VTD9 330 aa12.86□□□□□ -0.35
CXXC1-212ENST00000589940 MDFIQ99750 246 aa12.86□□□□□ -0.35
CXXC1-212ENST00000589940 PYGO2Q9BRQ0 406 aa12.86□□□□□ -0.35
CXXC1-212ENST00000589940 WFDC10AQ9H1F0 79 aa12.86□□□□□ -0.35
CXXC1-212ENST00000589940 TRAV9-1A0A075B6T8 112 aa12.85□□□□□ -0.35
CXXC1-212ENST00000589940 C7orf71A4D174 169 aa12.85□□□□□ -0.35
CXXC1-212ENST00000589940 GZMBP10144 247 aa12.85□□□□□ -0.35
CXXC1-212ENST00000589940 RPS20P60866 119 aaKnown RBP12.85□□□□□ -0.35
CXXC1-212ENST00000589940 PRR31Q5SQ13 230 aa12.85□□□□□ -0.35
CXXC1-212ENST00000589940 TRPT1Q86TN4 253 aaKnown RBP12.85□□□□□ -0.35
CXXC1-212ENST00000589940 GTSF1Q8WW33 167 aa12.85□□□□□ -0.35
CXXC1-212ENST00000589940 NAT8BQ9UHF3 227 aa12.85□□□□□ -0.35
CXXC1-212ENST00000589940 TRAV12-2A0A075B6T6 113 aa12.85□□□□□ -0.35
CXXC1-212ENST00000589940 TMSB15BA0A087X1C1 80 aa12.85□□□□□ -0.35
CXXC1-212ENST00000589940 HIGD1CA8MV81 97 aa12.85□□□□□ -0.35
CXXC1-212ENST00000589940 IGKV3D-20A0A0C4DH25 116 aa12.84□□□□□ -0.35
CXXC1-212ENST00000589940 BTF3L4Q96K17 158 aa12.84□□□□□ -0.35
CXXC1-212ENST00000589940 FAM210BQ96KR6 192 aa12.84□□□□□ -0.35
CXXC1-212ENST00000589940 TRAV12-3A0A0B4J271 114 aa12.84□□□□□ -0.35
CXXC1-212ENST00000589940 PCP4L1A6NKN8 68 aa12.84□□□□□ -0.35
CXXC1-212ENST00000589940 NUP35Q8NFH5 326 aa12.84□□□□□ -0.35
CXXC1-212ENST00000589940 ZNF324O75467 553 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms