RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 DAZ1Q9NQZ3 744 aaKnown RBP11.6□□□□□ -0.55
SMARCA4-214ENST00000589677 TRGV1A0A0A0MS02 117 aa11.6□□□□□ -0.55
SMARCA4-214ENST00000589677 C2orf70A6NJV1 201 aa11.59□□□□□ -0.55
SMARCA4-214ENST00000589677 ATOX1O00244 68 aa11.59□□□□□ -0.55
SMARCA4-214ENST00000589677 EGR2P11161 476 aaPredicted RBP11.59□□□□□ -0.55
SMARCA4-214ENST00000589677 DKK1O94907 266 aa11.59□□□□□ -0.55
SMARCA4-214ENST00000589677 COX6B1P14854 86 aa11.59□□□□□ -0.55
SMARCA4-214ENST00000589677 C3orf36Q3SXR2 165 aa11.59□□□□□ -0.55
SMARCA4-214ENST00000589677 SPATA12Q7Z6I5 190 aa11.59□□□□□ -0.55
SMARCA4-214ENST00000589677 PROK2Q9HC23 129 aa11.58□□□□□ -0.55
SMARCA4-214ENST00000589677 APC2O95996 2303 aa11.58□□□□□ -0.56
SMARCA4-214ENST00000589677 INSP01308 110 aa11.58□□□□□ -0.56
SMARCA4-214ENST00000589677 CR1LQ2VPA4 569 aa11.58□□□□□ -0.56
SMARCA4-214ENST00000589677 RBAKDNA6NC62 111 aa11.58□□□□□ -0.56
SMARCA4-214ENST00000589677 PF4P02776 101 aa11.58□□□□□ -0.56
SMARCA4-214ENST00000589677 RHOHQ15669 191 aa11.58□□□□□ -0.56
SMARCA4-214ENST00000589677 ZNF491Q8N8L2 437 aa11.58□□□□□ -0.56
SMARCA4-214ENST00000589677 MED12Q93074 2177 aa11.58□□□□□ -0.56
SMARCA4-214ENST00000589677 TRAV12-1A0A0B4J245 112 aa11.57□□□□□ -0.56
SMARCA4-214ENST00000589677 RPL32P62910 135 aaKnown RBP11.57□□□□□ -0.56
SMARCA4-214ENST00000589677 LINC01620Q4KN68 170 aa11.57□□□□□ -0.56
SMARCA4-214ENST00000589677 PRSS47A8MTI9 375 aa11.57□□□□□ -0.56
SMARCA4-214ENST00000589677 BAALC-AS2P0C853 105 aa11.57□□□□□ -0.56
SMARCA4-214ENST00000589677 SS18Q15532 418 aa11.57□□□□□ -0.56
SMARCA4-214ENST00000589677 MRAPQ8TCY5 172 aa11.57□□□□□ -0.56
SMARCA4-214ENST00000589677 TEX36Q5VZQ5 186 aa11.56□□□□□ -0.56
SMARCA4-214ENST00000589677 HEATR5AQ86XA9 2040 aa11.56□□□□□ -0.56
SMARCA4-214ENST00000589677 A0A0B4J2C4 111 aa11.56□□□□□ -0.56
SMARCA4-214ENST00000589677 ZNF503-AS2A6NEH8 195 aa11.56□□□□□ -0.56
SMARCA4-214ENST00000589677 GTSF1Q8WW33 167 aa11.56□□□□□ -0.56
SMARCA4-214ENST00000589677 GP9P14770 177 aa11.56□□□□□ -0.56
SMARCA4-214ENST00000589677 HAMPP81172 84 aa11.56□□□□□ -0.56
SMARCA4-214ENST00000589677 TMEM219Q86XT9 240 aa11.56□□□□□ -0.56
SMARCA4-214ENST00000589677 PLXNA2O75051 1894 aa11.56□□□□□ -0.56
SMARCA4-214ENST00000589677 IGHV1OR15-1A0A075B7D0 117 aa11.55□□□□□ -0.56
SMARCA4-214ENST00000589677 CD59P13987 128 aa11.55□□□□□ -0.56
SMARCA4-214ENST00000589677 HERVK_113P63121 156 aa11.55□□□□□ -0.56
SMARCA4-214ENST00000589677 MRPL53Q96EL3 112 aaKnown RBP11.55□□□□□ -0.56
SMARCA4-214ENST00000589677 TPSG1Q9NRR2 321 aa11.55□□□□□ -0.56
SMARCA4-214ENST00000589677 FAM236AA0A1B0GUQ0 79 aa11.55□□□□□ -0.56
SMARCA4-214ENST00000589677 FAM236BA0A1B0GV22 79 aa11.55□□□□□ -0.56
SMARCA4-214ENST00000589677 KRTAP27-1Q3LI81 207 aa11.55□□□□□ -0.56
SMARCA4-214ENST00000589677 C8orf31Q8N9H6 132 aa11.55□□□□□ -0.56
SMARCA4-214ENST00000589677 LENEPQ9Y5L5 61 aa11.55□□□□□ -0.56
SMARCA4-214ENST00000589677 CACNA1EQ15878 2313 aa11.55□□□□□ -0.56
SMARCA4-214ENST00000589677 RBM3P98179 157 aaKnown RBP11.55□□□□□ -0.56
SMARCA4-214ENST00000589677 C17orf77Q96MU5 243 aa11.54□□□□□ -0.56
SMARCA4-214ENST00000589677 DOCK9Q9BZ29 2069 aa11.54□□□□□ -0.56
SMARCA4-214ENST00000589677 FRMD6-AS1P0C7T7 363 aa11.54□□□□□ -0.56
SMARCA4-214ENST00000589677 FAM167A-AS1Q96KT0 104 aa11.54□□□□□ -0.56
SMARCA4-214ENST00000589677 CHD3Q12873 2000 aaKnown RBP11.54□□□□□ -0.56
SMARCA4-214ENST00000589677 CTRLP40313 264 aa11.54□□□□□ -0.56
SMARCA4-214ENST00000589677 A4D1N5 150 aa11.53□□□□□ -0.56
SMARCA4-214ENST00000589677 DPH3Q96FX2 82 aa11.53□□□□□ -0.56
SMARCA4-214ENST00000589677 INS-IGF2F8WCM5 200 aa11.53□□□□□ -0.56
SMARCA4-214ENST00000589677 OVOL3O00110 214 aa11.53□□□□□ -0.56
SMARCA4-214ENST00000589677 DUX4L9Q6RFH8 374 aaPredicted RBP11.53□□□□□ -0.56
SMARCA4-214ENST00000589677 CFHR4Q92496 578 aa11.53□□□□□ -0.56
SMARCA4-214ENST00000589677 RNF183Q96D59 192 aa11.53□□□□□ -0.56
SMARCA4-214ENST00000589677 ICOSQ9Y6W8 199 aa11.53□□□□□ -0.56
SMARCA4-214ENST00000589677 TRBV10-2A0A0K0K1G8 114 aa11.52□□□□□ -0.56
SMARCA4-214ENST00000589677 ATP6V0E1O15342 81 aa11.52□□□□□ -0.56
SMARCA4-214ENST00000589677 CITED2Q99967 270 aaPredicted RBP11.52□□□□□ -0.56
SMARCA4-214ENST00000589677 C1orf43Q9BWL3 253 aa11.52□□□□□ -0.56
SMARCA4-214ENST00000589677 GATA1P15976 413 aaPredicted RBP11.52□□□□□ -0.57
SMARCA4-214ENST00000589677 PATE2Q6UY27 113 aa11.52□□□□□ -0.57
SMARCA4-214ENST00000589677 Q6ZUT4 128 aa11.52□□□□□ -0.57
SMARCA4-214ENST00000589677 E9PLD3 99 aa11.52□□□□□ -0.57
SMARCA4-214ENST00000589677 IGHV3-53P01767 116 aa11.52□□□□□ -0.57
SMARCA4-214ENST00000589677 LOXP28300 417 aaPredicted RBP11.52□□□□□ -0.57
SMARCA4-214ENST00000589677 PIFOQ8TCI5 191 aa11.52□□□□□ -0.57
SMARCA4-214ENST00000589677 H3BT86 120 aa11.52□□□□□ -0.57
SMARCA4-214ENST00000589677 ATP5G1P05496 136 aa11.52□□□□□ -0.57
SMARCA4-214ENST00000589677 DYNAPQ8N1N2 210 aa11.52□□□□□ -0.57
SMARCA4-214ENST00000589677 TRBV6-1A0A0K0K1D8 114 aa11.51□□□□□ -0.57
SMARCA4-214ENST00000589677 HTN3P15516 51 aa11.51□□□□□ -0.57
SMARCA4-214ENST00000589677 MUSTN1Q8IVN3 82 aa11.51□□□□□ -0.57
SMARCA4-214ENST00000589677 NDUFA4O00483 81 aa11.51□□□□□ -0.57
SMARCA4-214ENST00000589677 DSCR8Q96T75 97 aa11.51□□□□□ -0.57
SMARCA4-214ENST00000589677 NLRC5Q86WI3 1866 aa11.51□□□□□ -0.57
SMARCA4-214ENST00000589677 NDUFC2O95298 119 aa11.51□□□□□ -0.57
SMARCA4-214ENST00000589677 COL8A2P25067 703 aa11.51□□□□□ -0.57
SMARCA4-214ENST00000589677 ODF1Q14990 250 aa11.51□□□□□ -0.57
SMARCA4-214ENST00000589677 TTTY13Q9BZ97 58 aa11.51□□□□□ -0.57
SMARCA4-214ENST00000589677 CRLF1O75462 422 aa11.5□□□□□ -0.57
SMARCA4-214ENST00000589677 FGF23Q9GZV9 251 aaPredicted RBP11.5□□□□□ -0.57
SMARCA4-214ENST00000589677 AGPAT4-IT1Q9H0P7 198 aa11.5□□□□□ -0.57
SMARCA4-214ENST00000589677 IGLV1-44P01699 117 aa11.5□□□□□ -0.57
SMARCA4-214ENST00000589677 MSRB2Q9Y3D2 182 aa11.5□□□□□ -0.57
SMARCA4-214ENST00000589677 TINCRA0A1B0GVN0 87 aa11.5□□□□□ -0.57
SMARCA4-214ENST00000589677 A0A1B0GXF2 115 aa11.5□□□□□ -0.57
SMARCA4-214ENST00000589677 F8WEM9 126 aa11.5□□□□□ -0.57
SMARCA4-214ENST00000589677 PFN2P35080 140 aa11.5□□□□□ -0.57
SMARCA4-214ENST00000589677 A0A1B0GX51 115 aa11.49□□□□□ -0.57
SMARCA4-214ENST00000589677 TMEM243Q9BU79 118 aa11.49□□□□□ -0.57
SMARCA4-214ENST00000589677 TCF20Q9UGU0 1960 aaKnown RBP11.49□□□□□ -0.57
SMARCA4-214ENST00000589677 EP300Q09472 2414 aaPredicted RBP11.49□□□□□ -0.57
SMARCA4-214ENST00000589677 KNCNA6PVL3 124 aa11.49□□□□□ -0.57
SMARCA4-214ENST00000589677 H3BUX3 64 aa11.49□□□□□ -0.57
SMARCA4-214ENST00000589677 Q71RC1 249 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms