RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	ATP6V0B	Q99437	205 aa		11.91	□□□□□ -0.5
DDX39A-209	ENST00000589318	PAXX	Q9BUH6	204 aa		11.91	□□□□□ -0.5
DDX39A-209	ENST00000589318	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	11.91	□□□□□ -0.5
DDX39A-209	ENST00000589318	VPREB3	Q9UKI3	123 aa		11.91	□□□□□ -0.5
DDX39A-209	ENST00000589318	BRI3	O95415	125 aa		11.9	□□□□□ -0.5
DDX39A-209	ENST00000589318	IL4	P05112	153 aa		11.9	□□□□□ -0.5
DDX39A-209	ENST00000589318	GP9	P14770	177 aa		11.9	□□□□□ -0.5
DDX39A-209	ENST00000589318	IL17REL	Q6ZVW7	336 aa		11.9	□□□□□ -0.5
DDX39A-209	ENST00000589318	ACAN	P16112	2415 aa		11.9	□□□□□ -0.51
DDX39A-209	ENST00000589318		A8MWL6	223 aa		11.9	□□□□□ -0.51
DDX39A-209	ENST00000589318	CFHR3	Q02985	330 aa		11.9	□□□□□ -0.51
DDX39A-209	ENST00000589318	ZNF580	Q9UK33	172 aa		11.9	□□□□□ -0.51
DDX39A-209	ENST00000589318	ANK3	Q12955	4377 aa	Known RBP	11.89	□□□□□ -0.51
DDX39A-209	ENST00000589318	SON	P18583	2426 aa	Known RBP	11.89	□□□□□ -0.51
DDX39A-209	ENST00000589318		A0A1W2PPM0	123 aa		11.89	□□□□□ -0.51
DDX39A-209	ENST00000589318		H3BRN7	92 aa		11.89	□□□□□ -0.51
DDX39A-209	ENST00000589318	HOXA3	O43365	443 aa	Predicted RBP	11.89	□□□□□ -0.51
DDX39A-209	ENST00000589318	CA1	P00915	261 aa	Predicted RBP	11.89	□□□□□ -0.51
DDX39A-209	ENST00000589318	FABP2	P12104	132 aa		11.89	□□□□□ -0.51
DDX39A-209	ENST00000589318	SCGB2A2	Q13296	93 aa		11.89	□□□□□ -0.51
DDX39A-209	ENST00000589318	FAM223B	A6NKX1	122 aa		11.88	□□□□□ -0.51
DDX39A-209	ENST00000589318		H3BUT2	72 aa		11.88	□□□□□ -0.51
DDX39A-209	ENST00000589318	CLEC3B	P05452	202 aa		11.88	□□□□□ -0.51
DDX39A-209	ENST00000589318	CAMP	P49913	170 aa		11.88	□□□□□ -0.51
DDX39A-209	ENST00000589318	TMEM95	Q3KNT9	176 aa		11.88	□□□□□ -0.51
DDX39A-209	ENST00000589318	FAM223A	Q8IWN6	122 aa		11.88	□□□□□ -0.51
DDX39A-209	ENST00000589318	STXBP6	Q8NFX7	210 aa		11.88	□□□□□ -0.51
DDX39A-209	ENST00000589318	EEF1AKMT3	Q96AZ1	226 aa		11.88	□□□□□ -0.51
DDX39A-209	ENST00000589318	SHANK2-AS3	Q9BTD1	123 aa		11.88	□□□□□ -0.51
DDX39A-209	ENST00000589318	SPCS1	Q9Y6A9	102 aa		11.88	□□□□□ -0.51
DDX39A-209	ENST00000589318	MYO9A	B2RTY4	2548 aa		11.88	□□□□□ -0.51
DDX39A-209	ENST00000589318	TRBV7-1	A0A0A6YYK4	115 aa		11.88	□□□□□ -0.51
DDX39A-209	ENST00000589318		H3BUA1	57 aa		11.88	□□□□□ -0.51
DDX39A-209	ENST00000589318	PEX7	O00628	323 aa		11.88	□□□□□ -0.51
DDX39A-209	ENST00000589318	IGLV1-40	P01703	118 aa		11.88	□□□□□ -0.51
DDX39A-209	ENST00000589318	TRGV3	P03979	118 aa		11.88	□□□□□ -0.51
DDX39A-209	ENST00000589318	CLEC19A	Q6UXS0	136 aa		11.88	□□□□□ -0.51
DDX39A-209	ENST00000589318	ZNF492	Q9P255	531 aa		11.88	□□□□□ -0.51
DDX39A-209	ENST00000589318	AZU1	P20160	251 aa		11.87	□□□□□ -0.51
DDX39A-209	ENST00000589318	CSN1S1	P47710	185 aa		11.87	□□□□□ -0.51
DDX39A-209	ENST00000589318	ATP5G2	Q06055	141 aa		11.87	□□□□□ -0.51
DDX39A-209	ENST00000589318	KIR3DS1	Q14943	382 aa		11.87	□□□□□ -0.51
DDX39A-209	ENST00000589318	CD300E	Q496F6	205 aa	Predicted RBP	11.87	□□□□□ -0.51
DDX39A-209	ENST00000589318	C16orf54	Q6UWD8	224 aa		11.87	□□□□□ -0.51
DDX39A-209	ENST00000589318	BOD1L2	Q8IYS8	172 aa		11.87	□□□□□ -0.51
DDX39A-209	ENST00000589318	KLK15	Q9H2R5	256 aa		11.87	□□□□□ -0.51
DDX39A-209	ENST00000589318	MYCNOS	P40205	109 aa		11.86	□□□□□ -0.51
DDX39A-209	ENST00000589318	TCTEX1D4	Q5JR98	221 aa		11.86	□□□□□ -0.51
DDX39A-209	ENST00000589318	JMJD8	Q96S16	334 aa		11.86	□□□□□ -0.51
DDX39A-209	ENST00000589318	RPP21	Q9H633	154 aa	Known RBP	11.86	□□□□□ -0.51
DDX39A-209	ENST00000589318	ZFAND3	Q9H8U3	227 aa		11.86	□□□□□ -0.51
DDX39A-209	ENST00000589318	TMEM14C	Q9P0S9	112 aa		11.86	□□□□□ -0.51
DDX39A-209	ENST00000589318	IGHV3-35	A0A0C4DH35	117 aa		11.86	□□□□□ -0.51
DDX39A-209	ENST00000589318	MRPS12	O15235	138 aa	Known RBP	11.86	□□□□□ -0.51
DDX39A-209	ENST00000589318	SCGB2A1	O75556	95 aa		11.86	□□□□□ -0.51
DDX39A-209	ENST00000589318	FGF6	P10767	208 aa		11.86	□□□□□ -0.51
DDX39A-209	ENST00000589318	TMEM190	Q8WZ59	177 aa		11.86	□□□□□ -0.51
DDX39A-209	ENST00000589318	TP73-AS1	Q9UF72	201 aa		11.86	□□□□□ -0.51
DDX39A-209	ENST00000589318	RBPMS2	Q6ZRY4	209 aa	Known RBP	11.85	□□□□□ -0.51
DDX39A-209	ENST00000589318	LINC00173	Q6ZV60	143 aa		11.85	□□□□□ -0.51
DDX39A-209	ENST00000589318	TEX29	Q8N6K0	151 aa		11.85	□□□□□ -0.51
DDX39A-209	ENST00000589318	ZNF702P	Q9H963	129 aa		11.85	□□□□□ -0.51
DDX39A-209	ENST00000589318	SIGLEC8	Q9NYZ4	499 aa		11.85	□□□□□ -0.51
DDX39A-209	ENST00000589318	FOXI2	Q6ZQN5	318 aa		11.84	□□□□□ -0.51
DDX39A-209	ENST00000589318	ZNF329	Q86UD4	541 aa		11.84	□□□□□ -0.51
DDX39A-209	ENST00000589318	PRSS22	Q9GZN4	317 aa		11.84	□□□□□ -0.51
DDX39A-209	ENST00000589318	RABAC1	Q9UI14	185 aa		11.84	□□□□□ -0.51
DDX39A-209	ENST00000589318	CHEK1	O14757	476 aa		11.84	□□□□□ -0.51
DDX39A-209	ENST00000589318	LCNL1	Q6ZST4	164 aa		11.84	□□□□□ -0.51
DDX39A-209	ENST00000589318	BLNK	Q8WV28	456 aa		11.84	□□□□□ -0.51
DDX39A-209	ENST00000589318	USMG5	Q96IX5	58 aa		11.84	□□□□□ -0.51
DDX39A-209	ENST00000589318	CLUHP3	Q96NS8	147 aa		11.84	□□□□□ -0.51
DDX39A-209	ENST00000589318	SPATA25	Q9BR10	227 aa		11.84	□□□□□ -0.51
DDX39A-209	ENST00000589318	ZNF747	Q9BV97	191 aa		11.84	□□□□□ -0.51
DDX39A-209	ENST00000589318	KLF12	Q9Y4X4	402 aa		11.84	□□□□□ -0.51
DDX39A-209	ENST00000589318	IGHV3OR16-8	A0A075B7F1	116 aa		11.83	□□□□□ -0.52
DDX39A-209	ENST00000589318	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	11.83	□□□□□ -0.52
DDX39A-209	ENST00000589318	IGHG4	P01861	327 aa		11.83	□□□□□ -0.52
DDX39A-209	ENST00000589318	PF4V1	P10720	104 aa		11.83	□□□□□ -0.52
DDX39A-209	ENST00000589318	LGALS9B	Q3B8N2	356 aa		11.83	□□□□□ -0.52
DDX39A-209	ENST00000589318	LGALS9C	Q6DKI2	356 aa		11.83	□□□□□ -0.52
DDX39A-209	ENST00000589318	GPR82	Q96P67	336 aa		11.83	□□□□□ -0.52
DDX39A-209	ENST00000589318	DUX5	Q96PT3	197 aa		11.83	□□□□□ -0.52
DDX39A-209	ENST00000589318	OTOG	Q6ZRI0	2925 aa		11.83	□□□□□ -0.52
DDX39A-209	ENST00000589318		A0A1B0GW15	77 aa		11.82	□□□□□ -0.52
DDX39A-209	ENST00000589318	CLPSL1	A2RUU4	121 aa		11.82	□□□□□ -0.52
DDX39A-209	ENST00000589318		H3BTX0	84 aa		11.82	□□□□□ -0.52
DDX39A-209	ENST00000589318	HAX1	O00165	279 aa		11.82	□□□□□ -0.52
DDX39A-209	ENST00000589318	ZNF207	O43670	478 aa	Known RBP	11.82	□□□□□ -0.52
DDX39A-209	ENST00000589318	TRBV12-3	P01733	135 aa		11.82	□□□□□ -0.52
DDX39A-209	ENST00000589318	PSMB8	P28062	276 aa		11.82	□□□□□ -0.52
DDX39A-209	ENST00000589318	RAB9A	P51151	201 aa		11.82	□□□□□ -0.52
DDX39A-209	ENST00000589318	C10orf99	Q6UWK7	81 aa		11.82	□□□□□ -0.52
DDX39A-209	ENST00000589318	AP5S1	Q9NUS5	200 aa		11.82	□□□□□ -0.52
DDX39A-209	ENST00000589318	CUBN	O60494	3623 aa		11.82	□□□□□ -0.52
DDX39A-209	ENST00000589318	GAGE12H	A6NDE8	117 aa		11.82	□□□□□ -0.52
DDX39A-209	ENST00000589318		F8W1H4	67 aa		11.82	□□□□□ -0.52
DDX39A-209	ENST00000589318	SMIM13	P0DJ93	91 aa		11.82	□□□□□ -0.52
DDX39A-209	ENST00000589318	CT45A10	P0DMU9	189 aa		11.82	□□□□□ -0.52
DDX39A-209	ENST00000589318	GATD1	Q8NB37	220 aa		11.82	□□□□□ -0.52

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