RNA–Protein interactions for RNA: ENST00000588875.2

SEC11C-205, Transcript of SEC11 homolog C, signal peptidase complex subunit, humanhuman

TSL 2 BASIC

Gene SEC11C, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11C-205ENST00000588875 ZNF266Q14584 549 aa11.38□□□□□ -0.59
SEC11C-205ENST00000588875 KHDC3LQ587J8 217 aa11.38□□□□□ -0.59
SEC11C-205ENST00000588875 PHYHIPLQ96FC7 376 aa11.38□□□□□ -0.59
SEC11C-205ENST00000588875 A0A096LPF7 62 aa11.37□□□□□ -0.59
SEC11C-205ENST00000588875 UBE2L3P68036 154 aaKnown RBP11.37□□□□□ -0.59
SEC11C-205ENST00000588875 ERCC8Q13216 396 aa11.37□□□□□ -0.59
SEC11C-205ENST00000588875 ACOT6Q3I5F7 207 aaPredicted RBP11.37□□□□□ -0.59
SEC11C-205ENST00000588875 Q5BKY6 102 aa11.37□□□□□ -0.59
SEC11C-205ENST00000588875 CDPF1Q6NVV7 123 aa11.37□□□□□ -0.59
SEC11C-205ENST00000588875 FAM122CQ6P4D5 195 aa11.37□□□□□ -0.59
SEC11C-205ENST00000588875 C9orf47Q6ZRZ4 202 aa11.37□□□□□ -0.59
SEC11C-205ENST00000588875 VSIG2Q96IQ7 327 aa11.37□□□□□ -0.59
SEC11C-205ENST00000588875 AGPAT4-IT1Q9H0P7 198 aa11.37□□□□□ -0.59
SEC11C-205ENST00000588875 SLC25A5P05141 298 aaKnown RBP11.36□□□□□ -0.59
SEC11C-205ENST00000588875 FAM19A4Q96LR4 140 aa11.36□□□□□ -0.59
SEC11C-205ENST00000588875 IGKV2-40A0A087WW87 121 aaPredicted RBP11.35□□□□□ -0.59
SEC11C-205ENST00000588875 TRAV12-3A0A0B4J271 114 aa11.35□□□□□ -0.59
SEC11C-205ENST00000588875 KLLNB2CW77 178 aa11.35□□□□□ -0.59
SEC11C-205ENST00000588875 J3KRW8 73 aa11.35□□□□□ -0.59
SEC11C-205ENST00000588875 EREGO14944 169 aa11.35□□□□□ -0.59
SEC11C-205ENST00000588875 SIVA1O15304 175 aa11.35□□□□□ -0.59
SEC11C-205ENST00000588875 IGKV2D-40P01614 121 aaPredicted RBP11.35□□□□□ -0.59
SEC11C-205ENST00000588875 DNAH10OSP0CZ25 163 aa11.35□□□□□ -0.59
SEC11C-205ENST00000588875 ERVFC1-1P60608 527 aa11.35□□□□□ -0.59
SEC11C-205ENST00000588875 RANP62826 216 aaKnown RBP11.35□□□□□ -0.59
SEC11C-205ENST00000588875 TMEM78Q5T7P6 136 aa11.35□□□□□ -0.59
SEC11C-205ENST00000588875 C18orf15Q96N68 181 aa11.35□□□□□ -0.59
SEC11C-205ENST00000588875 TMPRSS5Q9H3S3 457 aa11.35□□□□□ -0.59
SEC11C-205ENST00000588875 A0A1W2PPV4 95 aa11.34□□□□□ -0.59
SEC11C-205ENST00000588875 C7orf71A4D174 169 aa11.34□□□□□ -0.59
SEC11C-205ENST00000588875 NMBP08949 121 aa11.34□□□□□ -0.59
SEC11C-205ENST00000588875 CRISP2P16562 243 aa11.34□□□□□ -0.59
SEC11C-205ENST00000588875 CSN1S1P47710 185 aa11.34□□□□□ -0.59
SEC11C-205ENST00000588875 RAB2AP61019 212 aa11.34□□□□□ -0.59
SEC11C-205ENST00000588875 PQLC2Q6ZP29 291 aa11.34□□□□□ -0.59
SEC11C-205ENST00000588875 CCDC28AQ8IWP9 274 aa11.34□□□□□ -0.59
SEC11C-205ENST00000588875 HSD17B11Q8NBQ5 300 aa11.34□□□□□ -0.59
SEC11C-205ENST00000588875 INO80EQ8NBZ0 244 aaPredicted RBP11.34□□□□□ -0.59
SEC11C-205ENST00000588875 OR2G3Q8NGZ4 309 aa11.34□□□□□ -0.59
SEC11C-205ENST00000588875 VGLL1Q99990 258 aa11.34□□□□□ -0.59
SEC11C-205ENST00000588875 PYGO2Q9BRQ0 406 aa11.34□□□□□ -0.59
SEC11C-205ENST00000588875 PSMG3Q9BT73 122 aaPredicted RBP11.34□□□□□ -0.59
SEC11C-205ENST00000588875 A0A087WTM6 91 aa11.33□□□□□ -0.6
SEC11C-205ENST00000588875 RBAKDNA6NC62 111 aa11.33□□□□□ -0.6
SEC11C-205ENST00000588875 Q6ZTI0 123 aa11.33□□□□□ -0.6
SEC11C-205ENST00000588875 OR10G4Q8NGN3 311 aa11.33□□□□□ -0.6
SEC11C-205ENST00000588875 OR10G9Q8NGN4 311 aa11.33□□□□□ -0.6
SEC11C-205ENST00000588875 OR10G7Q8NGN6 311 aa11.33□□□□□ -0.6
SEC11C-205ENST00000588875 OR2T35Q8NGX2 323 aa11.33□□□□□ -0.6
SEC11C-205ENST00000588875 ZNF492Q9P255 531 aa11.33□□□□□ -0.6
SEC11C-205ENST00000588875 TNFSF18Q9UNG2 199 aa11.33□□□□□ -0.6
SEC11C-205ENST00000588875 FXYD6-FXYD2A0A087WZ82 144 aa11.32□□□□□ -0.6
SEC11C-205ENST00000588875 TRBV7-9A0A0J9YWB2 115 aa11.32□□□□□ -0.6
SEC11C-205ENST00000588875 RNF222A6NCQ9 220 aa11.32□□□□□ -0.6
SEC11C-205ENST00000588875 SNURFLB1AK76 121 aa11.32□□□□□ -0.6
SEC11C-205ENST00000588875 ZNF324O75467 553 aaPredicted RBP11.32□□□□□ -0.6
SEC11C-205ENST00000588875 EIF3GO75821 320 aaKnown RBP eCLIP11.32□□□□□ -0.6
SEC11C-205ENST00000588875 ATP6V0CP27449 155 aa11.32□□□□□ -0.6
SEC11C-205ENST00000588875 ZNF138P52744 262 aa11.32□□□□□ -0.6
SEC11C-205ENST00000588875 SERF2P84101 59 aa11.32□□□□□ -0.6
SEC11C-205ENST00000588875 CD300CQ08708 224 aa11.32□□□□□ -0.6
SEC11C-205ENST00000588875 ZFAND2AQ8N6M9 145 aa11.32□□□□□ -0.6
SEC11C-205ENST00000588875 NXPH4O95158 308 aa11.31□□□□□ -0.6
SEC11C-205ENST00000588875 GPX1P07203 203 aa11.31□□□□□ -0.6
SEC11C-205ENST00000588875 HAMPP81172 84 aa11.31□□□□□ -0.6
SEC11C-205ENST00000588875 DAZ2Q13117 558 aaKnown RBP11.31□□□□□ -0.6
SEC11C-205ENST00000588875 BTN1A1Q13410 526 aa11.31□□□□□ -0.6
SEC11C-205ENST00000588875 LINC00467Q9BRT7 94 aa11.31□□□□□ -0.6
SEC11C-205ENST00000588875 OTORQ9NRC9 128 aa11.31□□□□□ -0.6
SEC11C-205ENST00000588875 DIRC3C9JPN6 131 aa11.3□□□□□ -0.6
SEC11C-205ENST00000588875 G3V3Q6 166 aa11.3□□□□□ -0.6
SEC11C-205ENST00000588875 MBP02144 154 aa11.3□□□□□ -0.6
SEC11C-205ENST00000588875 RNASE4P34096 147 aaKnown RBP11.3□□□□□ -0.6
SEC11C-205ENST00000588875 CDC34P49427 236 aaPredicted RBP11.3□□□□□ -0.6
SEC11C-205ENST00000588875 UBR4Q5T4S7 5183 aa11.3□□□□□ -0.6
SEC11C-205ENST00000588875 BORCS7-ASMTA0A0B4J1R7 106 aa11.29□□□□□ -0.6
SEC11C-205ENST00000588875 FAM229AH3BQW9 127 aa11.29□□□□□ -0.6
SEC11C-205ENST00000588875 HMGB3O15347 200 aaKnown RBP11.29□□□□□ -0.6
SEC11C-205ENST00000588875 STAG3L2P0CL84 134 aa11.29□□□□□ -0.6
SEC11C-205ENST00000588875 STAG3L3P0CL85 134 aa11.29□□□□□ -0.6
SEC11C-205ENST00000588875 FAM74A1Q5RGS3 127 aa11.29□□□□□ -0.6
SEC11C-205ENST00000588875 PRR9Q5T870 116 aa11.29□□□□□ -0.6
SEC11C-205ENST00000588875 RPL7L1Q6DKI1 246 aaKnown RBP11.29□□□□□ -0.6
SEC11C-205ENST00000588875 ARL6IP6Q8N6S5 226 aa11.29□□□□□ -0.6
SEC11C-205ENST00000588875 ZNF680Q8NEM1 530 aa11.29□□□□□ -0.6
SEC11C-205ENST00000588875 Q8TAT8 98 aa11.29□□□□□ -0.6
SEC11C-205ENST00000588875 SH3BGRL3Q9H299 93 aa11.29□□□□□ -0.6
SEC11C-205ENST00000588875 LENEPQ9Y5L5 61 aa11.29□□□□□ -0.6
SEC11C-205ENST00000588875 PGPA6NDG6 321 aa11.28□□□□□ -0.6
SEC11C-205ENST00000588875 J3QL48 77 aa11.28□□□□□ -0.6
SEC11C-205ENST00000588875 ARL14EPLP0DKL9 152 aa11.28□□□□□ -0.6
SEC11C-205ENST00000588875 GCSHP23434 173 aa11.28□□□□□ -0.6
SEC11C-205ENST00000588875 ANXA2RQ3ZCQ2 193 aa11.28□□□□□ -0.6
SEC11C-205ENST00000588875 NFE4Q86UQ8 179 aa11.28□□□□□ -0.6
SEC11C-205ENST00000588875 EIF4E3Q8N5X7 224 aaKnown RBP11.28□□□□□ -0.6
SEC11C-205ENST00000588875 CMTM2Q8TAZ6 248 aa11.28□□□□□ -0.6
SEC11C-205ENST00000588875 RAB24Q969Q5 203 aa11.28□□□□□ -0.6
SEC11C-205ENST00000588875 HYLS1Q96M11 299 aa11.28□□□□□ -0.6
SEC11C-205ENST00000588875 DNAH8Q96JB1 4490 aa11.28□□□□□ -0.6
SEC11C-205ENST00000588875 TRGV2A0A075B6R0 118 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms