RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 TGIF2-C20orf24A0A0A6YYL0 155 aa19.33■□□□□ 0.68
SCAMP4-210ENST00000588555 S100PP25815 95 aa19.33■□□□□ 0.68
SCAMP4-210ENST00000588555 CT83Q5H943 113 aa19.33■□□□□ 0.68
SCAMP4-210ENST00000588555 OR4B1Q8NGF8 309 aa19.33■□□□□ 0.68
SCAMP4-210ENST00000588555 TMEM158Q8WZ71 300 aa19.33■□□□□ 0.68
SCAMP4-210ENST00000588555 CRISP2P16562 243 aa19.32■□□□□ 0.68
SCAMP4-210ENST00000588555 KCNIP4Q6PIL6 250 aa19.32■□□□□ 0.68
SCAMP4-210ENST00000588555 APRG1Q8IVJ8 170 aa19.32■□□□□ 0.68
SCAMP4-210ENST00000588555 PYGO2Q9BRQ0 406 aa19.32■□□□□ 0.68
SCAMP4-210ENST00000588555 AGRNO00468 2067 aa19.32■□□□□ 0.68
SCAMP4-210ENST00000588555 TRBV24-1A0A075B6N3 115 aa19.32■□□□□ 0.68
SCAMP4-210ENST00000588555 SMIM27A0A1W2PRY6 76 aa19.32■□□□□ 0.68
SCAMP4-210ENST00000588555 C3orf56Q8N813 242 aa19.32■□□□□ 0.68
SCAMP4-210ENST00000588555 ZNF124Q15973 351 aa19.31■□□□□ 0.68
SCAMP4-210ENST00000588555 ODF3Q96PU9 254 aa19.31■□□□□ 0.68
SCAMP4-210ENST00000588555 A0A1W2PPQ1 181 aa19.3■□□□□ 0.68
SCAMP4-210ENST00000588555 KNCNA6PVL3 124 aa19.3■□□□□ 0.68
SCAMP4-210ENST00000588555 DUSP14O95147 198 aaKnown RBP19.3■□□□□ 0.68
SCAMP4-210ENST00000588555 TSKUQ8WUA8 353 aa19.3■□□□□ 0.68
SCAMP4-210ENST00000588555 A8MTW9 85 aa19.29■□□□□ 0.68
SCAMP4-210ENST00000588555 FABP5P3A8MUU1 101 aa19.29■□□□□ 0.68
SCAMP4-210ENST00000588555 HLA-DRB4P13762 266 aa19.29■□□□□ 0.68
SCAMP4-210ENST00000588555 INSL3P51460 131 aa19.29■□□□□ 0.68
SCAMP4-210ENST00000588555 RPL19P84098 196 aaKnown RBP19.29■□□□□ 0.68
SCAMP4-210ENST00000588555 BEAN1Q3B7T3 259 aa19.29■□□□□ 0.68
SCAMP4-210ENST00000588555 SHISA2Q6UWI4 295 aa19.29■□□□□ 0.68
SCAMP4-210ENST00000588555 C12orf54Q6X4T0 127 aa19.29■□□□□ 0.68
SCAMP4-210ENST00000588555 WFDC9Q8NEX5 89 aa19.29■□□□□ 0.68
SCAMP4-210ENST00000588555 OR2D3Q8NGH3 330 aa19.29■□□□□ 0.68
SCAMP4-210ENST00000588555 HLA-DRB4X5D2U9 266 aa19.29■□□□□ 0.68
SCAMP4-210ENST00000588555 NOTCH3Q9UM47 2321 aa19.28■□□□□ 0.68
SCAMP4-210ENST00000588555 KLLNB2CW77 178 aa19.28■□□□□ 0.68
SCAMP4-210ENST00000588555 H3BMM0 161 aa19.28■□□□□ 0.68
SCAMP4-210ENST00000588555 TCL1AP56279 114 aa19.28■□□□□ 0.68
SCAMP4-210ENST00000588555 KIR3DS1Q14943 382 aa19.28■□□□□ 0.68
SCAMP4-210ENST00000588555 ACTL10Q5JWF8 245 aa19.28■□□□□ 0.68
SCAMP4-210ENST00000588555 C9orf66Q5T8R8 295 aa19.28■□□□□ 0.68
SCAMP4-210ENST00000588555 AMTNQ6UX39 209 aa19.28■□□□□ 0.68
SCAMP4-210ENST00000588555 A8MWL6 223 aa19.27■□□□□ 0.68
SCAMP4-210ENST00000588555 Q6ZQT7 251 aa19.27■□□□□ 0.68
SCAMP4-210ENST00000588555 NEU1Q99519 415 aa19.27■□□□□ 0.68
SCAMP4-210ENST00000588555 IGKV3-20P01619 116 aa19.27■□□□□ 0.67
SCAMP4-210ENST00000588555 RAB5AP20339 215 aa19.27■□□□□ 0.67
SCAMP4-210ENST00000588555 ZNF575Q86XF7 245 aa19.27■□□□□ 0.67
SCAMP4-210ENST00000588555 FAM210BQ96KR6 192 aa19.27■□□□□ 0.67
SCAMP4-210ENST00000588555 TRAV9-1A0A075B6T8 112 aa19.26■□□□□ 0.67
SCAMP4-210ENST00000588555 J3KRW8 73 aa19.26■□□□□ 0.67
SCAMP4-210ENST00000588555 GPX1P07203 203 aa19.26■□□□□ 0.67
SCAMP4-210ENST00000588555 GTSF1Q8WW33 167 aa19.26■□□□□ 0.67
SCAMP4-210ENST00000588555 C11orf21Q9P2W6 132 aa19.26■□□□□ 0.67
SCAMP4-210ENST00000588555 OR11H12B2RN74 326 aa19.25■□□□□ 0.67
SCAMP4-210ENST00000588555 FAM110AQ9BQ89 295 aa19.25■□□□□ 0.67
SCAMP4-210ENST00000588555 GFRA4Q9GZZ7 299 aa19.25■□□□□ 0.67
SCAMP4-210ENST00000588555 GZMBP10144 247 aa19.24■□□□□ 0.67
SCAMP4-210ENST00000588555 LINC01559Q495D7 138 aa19.24■□□□□ 0.67
SCAMP4-210ENST00000588555 TMEM189A5PLL7 270 aa19.24■□□□□ 0.67
SCAMP4-210ENST00000588555 FAM231BA6NCW3 169 aa19.24■□□□□ 0.67
SCAMP4-210ENST00000588555 CD7P09564 240 aa19.24■□□□□ 0.67
SCAMP4-210ENST00000588555 LEPP41159 167 aa19.24■□□□□ 0.67
SCAMP4-210ENST00000588555 Q6AWC8 147 aa19.24■□□□□ 0.67
SCAMP4-210ENST00000588555 C19orf73Q9NVV2 129 aa19.24■□□□□ 0.67
SCAMP4-210ENST00000588555 NAT8BQ9UHF3 227 aa19.24■□□□□ 0.67
SCAMP4-210ENST00000588555 RBMY1BA6NDE4 496 aaKnown RBP19.23■□□□□ 0.67
SCAMP4-210ENST00000588555 RBMY1EA6NEQ0 496 aaKnown RBP19.23■□□□□ 0.67
SCAMP4-210ENST00000588555 HIGD1CA8MV81 97 aa19.23■□□□□ 0.67
SCAMP4-210ENST00000588555 RBMY1DP0C7P1 496 aaKnown RBP19.23■□□□□ 0.67
SCAMP4-210ENST00000588555 NUP35Q8NFH5 326 aa19.23■□□□□ 0.67
SCAMP4-210ENST00000588555 MCRIP2Q9BUT9 160 aaKnown RBP19.23■□□□□ 0.67
SCAMP4-210ENST00000588555 TYMSP04818 313 aa19.22■□□□□ 0.67
SCAMP4-210ENST00000588555 RNASE4P34096 147 aaKnown RBP19.22■□□□□ 0.67
SCAMP4-210ENST00000588555 CMC4P56277 68 aaPredicted RBP19.22■□□□□ 0.67
SCAMP4-210ENST00000588555 BTF3L4Q96K17 158 aa19.22■□□□□ 0.67
SCAMP4-210ENST00000588555 TMSB15BA0A087X1C1 80 aa19.21■□□□□ 0.67
SCAMP4-210ENST00000588555 TRAV21A0A0B4J279 112 aa19.21■□□□□ 0.67
SCAMP4-210ENST00000588555 IGKV3D-20A0A0C4DH25 116 aa19.21■□□□□ 0.67
SCAMP4-210ENST00000588555 M0R2Z0 102 aa19.21■□□□□ 0.67
SCAMP4-210ENST00000588555 ORM1P02763 201 aa19.21■□□□□ 0.67
SCAMP4-210ENST00000588555 FOXA3P55318 350 aaPredicted RBP19.21■□□□□ 0.67
SCAMP4-210ENST00000588555 CDKN1BP46527 198 aa19.21■□□□□ 0.67
SCAMP4-210ENST00000588555 SPINK13Q1W4C9 94 aa19.2■□□□□ 0.66
SCAMP4-210ENST00000588555 CLUHP3Q96NS8 147 aa19.2■□□□□ 0.66
SCAMP4-210ENST00000588555 ANK2Q01484 3957 aa19.19■□□□□ 0.66
SCAMP4-210ENST00000588555 TSPOP30536 169 aa19.19■□□□□ 0.66
SCAMP4-210ENST00000588555 GFI1BQ5VTD9 330 aa19.19■□□□□ 0.66
SCAMP4-210ENST00000588555 PKD1L1Q8TDX9 2849 aa19.19■□□□□ 0.66
SCAMP4-210ENST00000588555 WIPF1O43516 503 aa19.19■□□□□ 0.66
SCAMP4-210ENST00000588555 RPS20P60866 119 aaKnown RBP19.19■□□□□ 0.66
SCAMP4-210ENST00000588555 XKRY2A2RUG3 117 aa19.18■□□□□ 0.66
SCAMP4-210ENST00000588555 C7orf71A4D174 169 aa19.18■□□□□ 0.66
SCAMP4-210ENST00000588555 FRMD6-AS1P0C7T7 363 aa19.18■□□□□ 0.66
SCAMP4-210ENST00000588555 IGLL1P15814 213 aa19.18■□□□□ 0.66
SCAMP4-210ENST00000588555 RPS10P46783 165 aaKnown RBP19.18■□□□□ 0.66
SCAMP4-210ENST00000588555 TRAV12-2A0A075B6T6 113 aa19.17■□□□□ 0.66
SCAMP4-210ENST00000588555 SPINK4O60575 86 aa19.17■□□□□ 0.66
SCAMP4-210ENST00000588555 ZNF324O75467 553 aaPredicted RBP19.17■□□□□ 0.66
SCAMP4-210ENST00000588555 WFDC10AQ9H1F0 79 aa19.17■□□□□ 0.66
SCAMP4-210ENST00000588555 SRD5A3Q9H8P0 318 aa19.17■□□□□ 0.66
SCAMP4-210ENST00000588555 TRPT1Q86TN4 253 aaKnown RBP19.16■□□□□ 0.66
SCAMP4-210ENST00000588555 PGLYRP4Q96LB8 373 aa19.16■□□□□ 0.66
SCAMP4-210ENST00000588555 TRAV12-3A0A0B4J271 114 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms