RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 TMEM183BQ1AE95 376 aa7.74□□□□□ -1.17
SMARCA4-213ENST00000587988 Q86TA4 180 aa7.74□□□□□ -1.17
SMARCA4-213ENST00000587988 FMC1Q96HJ9 113 aa7.74□□□□□ -1.17
SMARCA4-213ENST00000587988 LINC01587Q99440 93 aa7.74□□□□□ -1.17
SMARCA4-213ENST00000587988 EIF5A2Q9GZV4 153 aaKnown RBP7.74□□□□□ -1.17
SMARCA4-213ENST00000587988 GOLT1BQ9Y3E0 138 aa7.74□□□□□ -1.17
SMARCA4-213ENST00000587988 U3KQK5 164 aa7.74□□□□□ -1.17
SMARCA4-213ENST00000587988 TRBV6-1A0A0K0K1D8 114 aa7.73□□□□□ -1.17
SMARCA4-213ENST00000587988 FBLL1A6NHQ2 334 aaKnown RBP7.73□□□□□ -1.17
SMARCA4-213ENST00000587988 ZNF705GA8MUZ8 300 aaPredicted RBP7.73□□□□□ -1.17
SMARCA4-213ENST00000587988 DEFB4AO15263 64 aa7.73□□□□□ -1.17
SMARCA4-213ENST00000587988 PDE6DO43924 150 aa7.73□□□□□ -1.17
SMARCA4-213ENST00000587988 LTAP01374 205 aa7.73□□□□□ -1.17
SMARCA4-213ENST00000587988 RPL35P42766 123 aaKnown RBP7.73□□□□□ -1.17
SMARCA4-213ENST00000587988 ZNF80P51504 273 aaPredicted RBP7.73□□□□□ -1.17
SMARCA4-213ENST00000587988 RAB14P61106 215 aa7.73□□□□□ -1.17
SMARCA4-213ENST00000587988 SRSF3P84103 164 aaKnown RBP7.73□□□□□ -1.17
SMARCA4-213ENST00000587988 CLLU1Q5K131 121 aa7.73□□□□□ -1.17
SMARCA4-213ENST00000587988 C20orf144Q9BQM9 153 aa7.73□□□□□ -1.17
SMARCA4-213ENST00000587988 NDFIP1Q9BT67 221 aa7.73□□□□□ -1.17
SMARCA4-213ENST00000587988 TMEM208Q9BTX3 173 aa7.73□□□□□ -1.17
SMARCA4-213ENST00000587988 MED9Q9NWA0 146 aa7.73□□□□□ -1.17
SMARCA4-213ENST00000587988 RAB19A4D1S5 217 aa7.72□□□□□ -1.17
SMARCA4-213ENST00000587988 HTN1P15515 57 aa7.72□□□□□ -1.17
SMARCA4-213ENST00000587988 AZU1P20160 251 aa7.72□□□□□ -1.17
SMARCA4-213ENST00000587988 SAPCD1Q5SSQ6 148 aa7.72□□□□□ -1.17
SMARCA4-213ENST00000587988 Q6AWC8 147 aa7.72□□□□□ -1.17
SMARCA4-213ENST00000587988 Q8NAQ8 132 aa7.72□□□□□ -1.17
SMARCA4-213ENST00000587988 NHLRC2Q8NBF2 726 aa7.72□□□□□ -1.17
SMARCA4-213ENST00000587988 NEU1Q99519 415 aa7.72□□□□□ -1.17
SMARCA4-213ENST00000587988 NIPSNAP3BQ9BS92 247 aa7.72□□□□□ -1.17
SMARCA4-213ENST00000587988 NBEAL2Q6ZNJ1 2754 aa7.72□□□□□ -1.17
SMARCA4-213ENST00000587988 TENM3Q9P273 2699 aa7.71□□□□□ -1.17
SMARCA4-213ENST00000587988 IGHV4-28A0A0C4DH34 117 aa7.71□□□□□ -1.18
SMARCA4-213ENST00000587988 A0A0J9YWU9 116 aa7.71□□□□□ -1.18
SMARCA4-213ENST00000587988 C9JQL5 133 aa7.71□□□□□ -1.18
SMARCA4-213ENST00000587988 H7BYZ3 331 aa7.71□□□□□ -1.18
SMARCA4-213ENST00000587988 GCGP01275 180 aa7.71□□□□□ -1.18
SMARCA4-213ENST00000587988 S100A9P06702 114 aaKnown RBP7.71□□□□□ -1.18
SMARCA4-213ENST00000587988 SRP19P09132 144 aaKnown RBP7.71□□□□□ -1.18
SMARCA4-213ENST00000587988 MIFP14174 115 aa7.71□□□□□ -1.18
SMARCA4-213ENST00000587988 CRIP1P50238 77 aa7.71□□□□□ -1.18
SMARCA4-213ENST00000587988 TAS2R60P59551 318 aa7.71□□□□□ -1.18
SMARCA4-213ENST00000587988 SMUG1Q53HV7 270 aa7.71□□□□□ -1.18
SMARCA4-213ENST00000587988 BAGE2Q86Y30 109 aa7.71□□□□□ -1.18
SMARCA4-213ENST00000587988 TMEM256Q8N2U0 113 aa7.71□□□□□ -1.18
SMARCA4-213ENST00000587988 ZC2HC1AQ96GY0 325 aa7.71□□□□□ -1.18
SMARCA4-213ENST00000587988 ZFP30Q9Y2G7 519 aa7.71□□□□□ -1.18
SMARCA4-213ENST00000587988 SMIM9A6NGZ8 99 aa7.7□□□□□ -1.18
SMARCA4-213ENST00000587988 RGS13O14921 159 aa7.7□□□□□ -1.18
SMARCA4-213ENST00000587988 IGLV2-8P01709 118 aa7.7□□□□□ -1.18
SMARCA4-213ENST00000587988 RRN3P1Q2M238 152 aa7.7□□□□□ -1.18
SMARCA4-213ENST00000587988 CENPWQ5EE01 88 aa7.7□□□□□ -1.18
SMARCA4-213ENST00000587988 MUC21Q5SSG8 566 aa7.7□□□□□ -1.18
SMARCA4-213ENST00000587988 COX8CQ7Z4L0 72 aa7.7□□□□□ -1.18
SMARCA4-213ENST00000587988 TMEM183AQ8IXX5 376 aa7.7□□□□□ -1.18
SMARCA4-213ENST00000587988 MLST8Q9BVC4 326 aa7.7□□□□□ -1.18
SMARCA4-213ENST00000587988 C11orf21Q9P2W6 132 aa7.7□□□□□ -1.18
SMARCA4-213ENST00000587988 TP53TG3Q9ULZ0 132 aa7.7□□□□□ -1.18
SMARCA4-213ENST00000587988 COL7A1Q02388 2944 aa7.7□□□□□ -1.18
SMARCA4-213ENST00000587988 TRBV20OR9-2A0A075B6H5 130 aa7.69□□□□□ -1.18
SMARCA4-213ENST00000587988 IGHV1OR15-1A0A075B7D0 117 aa7.69□□□□□ -1.18
SMARCA4-213ENST00000587988 TRAV21A0A0B4J279 112 aa7.69□□□□□ -1.18
SMARCA4-213ENST00000587988 PLAC8L1A1L4L8 177 aa7.69□□□□□ -1.18
SMARCA4-213ENST00000587988 PGPEP1LA6NFU8 196 aa7.69□□□□□ -1.18
SMARCA4-213ENST00000587988 TMEM250H0YL14 139 aa7.69□□□□□ -1.18
SMARCA4-213ENST00000587988 NDUFS6O75380 124 aaKnown RBP7.69□□□□□ -1.18
SMARCA4-213ENST00000587988 PFN1P07737 140 aaKnown RBP7.69□□□□□ -1.18
SMARCA4-213ENST00000587988 CEBPGP53567 150 aa7.69□□□□□ -1.18
SMARCA4-213ENST00000587988 ZNF674Q2M3X9 581 aa7.69□□□□□ -1.18
SMARCA4-213ENST00000587988 PYGO2Q9BRQ0 406 aa7.69□□□□□ -1.18
SMARCA4-213ENST00000587988 LINC00467Q9BRT7 94 aa7.69□□□□□ -1.18
SMARCA4-213ENST00000587988 PARLQ9H300 379 aa7.69□□□□□ -1.18
SMARCA4-213ENST00000587988 EDA2RQ9HAV5 297 aa7.69□□□□□ -1.18
SMARCA4-213ENST00000587988 FABP5P3A8MUU1 101 aa7.68□□□□□ -1.18
SMARCA4-213ENST00000587988 SH2D1AO60880 128 aa7.68□□□□□ -1.18
SMARCA4-213ENST00000587988 EMP1P54849 157 aa7.68□□□□□ -1.18
SMARCA4-213ENST00000587988 PEA15Q15121 130 aa7.68□□□□□ -1.18
SMARCA4-213ENST00000587988 ANXA2RQ3ZCQ2 193 aa7.68□□□□□ -1.18
SMARCA4-213ENST00000587988 EIF4E3Q8N5X7 224 aaKnown RBP7.68□□□□□ -1.18
SMARCA4-213ENST00000587988 RNASE8Q8TDE3 154 aaKnown RBP7.68□□□□□ -1.18
SMARCA4-213ENST00000587988 C11orf68Q9H3H3 251 aaKnown RBP7.68□□□□□ -1.18
SMARCA4-213ENST00000587988 NAGKQ9UJ70 344 aa7.68□□□□□ -1.18
SMARCA4-213ENST00000587988 CBY3A6NI87 242 aa7.67□□□□□ -1.18
SMARCA4-213ENST00000587988 GNRH2O43555 120 aa7.67□□□□□ -1.18
SMARCA4-213ENST00000587988 GNG4P50150 75 aa7.67□□□□□ -1.18
SMARCA4-213ENST00000587988 FAM162BQ5T6X4 162 aa7.67□□□□□ -1.18
SMARCA4-213ENST00000587988 FAM159AQ6UWV7 190 aa7.67□□□□□ -1.18
SMARCA4-213ENST00000587988 C11orf72Q8NBR9 251 aa7.67□□□□□ -1.18
SMARCA4-213ENST00000587988 OCC1Q8TAD7 63 aa7.67□□□□□ -1.18
SMARCA4-213ENST00000587988 TMEM263Q8WUH6 116 aaKnown RBP7.67□□□□□ -1.18
SMARCA4-213ENST00000587988 CELA1Q9UNI1 258 aa7.67□□□□□ -1.18
SMARCA4-213ENST00000587988 IGKV3D-20A0A0C4DH25 116 aa7.66□□□□□ -1.18
SMARCA4-213ENST00000587988 C9JCJ5 164 aa7.66□□□□□ -1.18
SMARCA4-213ENST00000587988 TYMSP04818 313 aa7.66□□□□□ -1.18
SMARCA4-213ENST00000587988 MGST1P10620 155 aaKnown RBP7.66□□□□□ -1.18
SMARCA4-213ENST00000587988 OR5I1Q13606 314 aa7.66□□□□□ -1.18
SMARCA4-213ENST00000587988 TDRG1Q3Y452 100 aa7.66□□□□□ -1.18
SMARCA4-213ENST00000587988 PRR27Q6MZM9 219 aa7.66□□□□□ -1.18
SMARCA4-213ENST00000587988 ZNF575Q86XF7 245 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms