RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 Q8N6K4 173 aa7.57□□□□□ -1.2
LINC01539-201ENST00000587904 OR1L4Q8NGR5 311 aa7.57□□□□□ -1.2
LINC01539-201ENST00000587904 ZNF747Q9BV97 191 aa7.57□□□□□ -1.2
LINC01539-201ENST00000587904 IGLV2-8P01709 118 aa7.56□□□□□ -1.2
LINC01539-201ENST00000587904 DEFA4P12838 97 aa7.56□□□□□ -1.2
LINC01539-201ENST00000587904 GCSHP23434 173 aa7.56□□□□□ -1.2
LINC01539-201ENST00000587904 FXYD2P54710 66 aa7.56□□□□□ -1.2
LINC01539-201ENST00000587904 HES1Q14469 280 aa7.56□□□□□ -1.2
LINC01539-201ENST00000587904 TAL2Q16559 108 aa7.56□□□□□ -1.2
LINC01539-201ENST00000587904 PRR31Q5SQ13 230 aa7.56□□□□□ -1.2
LINC01539-201ENST00000587904 LRRC75A-AS1Q8N1F1 130 aa7.56□□□□□ -1.2
LINC01539-201ENST00000587904 TMEM116Q8NCL8 245 aa7.56□□□□□ -1.2
LINC01539-201ENST00000587904 NUP35Q8NFH5 326 aa7.56□□□□□ -1.2
LINC01539-201ENST00000587904 TRGV9Q99603 122 aa7.56□□□□□ -1.2
LINC01539-201ENST00000587904 TMEM167BQ9NRX6 74 aa7.56□□□□□ -1.2
LINC01539-201ENST00000587904 SPANXCQ9NY87 97 aa7.56□□□□□ -1.2
LINC01539-201ENST00000587904 TRAV5A0A0B4J249 113 aa7.56□□□□□ -1.2
LINC01539-201ENST00000587904 CFAP126Q5VTH2 177 aa7.56□□□□□ -1.2
LINC01539-201ENST00000587904 NPIPB3Q92617 1050 aa7.56□□□□□ -1.2
LINC01539-201ENST00000587904 MDFICQ9P1T7 246 aa7.56□□□□□ -1.2
LINC01539-201ENST00000587904 NAV3Q8IVL0 2385 aa7.56□□□□□ -1.2
LINC01539-201ENST00000587904 ZNF688P0C7X2 276 aa7.55□□□□□ -1.2
LINC01539-201ENST00000587904 FAM106CPP0CH98 169 aa7.55□□□□□ -1.2
LINC01539-201ENST00000587904 COX6B1P14854 86 aa7.55□□□□□ -1.2
LINC01539-201ENST00000587904 ASIPP42127 132 aa7.55□□□□□ -1.2
LINC01539-201ENST00000587904 CSN1S1P47710 185 aa7.55□□□□□ -1.2
LINC01539-201ENST00000587904 MFAP4P55083 255 aa7.55□□□□□ -1.2
LINC01539-201ENST00000587904 MEIG1Q5JSS6 88 aa7.55□□□□□ -1.2
LINC01539-201ENST00000587904 IGF2BP2-AS1Q96M15 143 aa7.55□□□□□ -1.2
LINC01539-201ENST00000587904 IGKV1D-37A0A075B6S9 117 aa7.55□□□□□ -1.2
LINC01539-201ENST00000587904 A8MWL6 223 aa7.55□□□□□ -1.2
LINC01539-201ENST00000587904 F8WDY8 70 aa7.55□□□□□ -1.2
LINC01539-201ENST00000587904 COX7A2P2O60397 106 aa7.55□□□□□ -1.2
LINC01539-201ENST00000587904 HBBP68871 147 aa7.55□□□□□ -1.2
LINC01539-201ENST00000587904 PAX8Q06710 450 aa7.55□□□□□ -1.2
LINC01539-201ENST00000587904 MLANAQ16655 118 aa7.55□□□□□ -1.2
LINC01539-201ENST00000587904 RRN3P1Q2M238 152 aa7.55□□□□□ -1.2
LINC01539-201ENST00000587904 CEND1Q8N111 149 aa7.55□□□□□ -1.2
LINC01539-201ENST00000587904 TACC2O95359 2948 aa7.55□□□□□ -1.2
LINC01539-201ENST00000587904 IGHV4-61A0A0C4DH41 118 aa7.54□□□□□ -1.2
LINC01539-201ENST00000587904 NPFFO15130 113 aa7.54□□□□□ -1.2
LINC01539-201ENST00000587904 C8orf88P0DMB2 117 aa7.54□□□□□ -1.2
LINC01539-201ENST00000587904 HLA-DRB4P13762 266 aa7.54□□□□□ -1.2
LINC01539-201ENST00000587904 SAA4P35542 130 aa7.54□□□□□ -1.2
LINC01539-201ENST00000587904 FAM159AQ6UWV7 190 aa7.54□□□□□ -1.2
LINC01539-201ENST00000587904 MIR17HGQ75NE6 70 aa7.54□□□□□ -1.2
LINC01539-201ENST00000587904 NFE4Q86UQ8 179 aa7.54□□□□□ -1.2
LINC01539-201ENST00000587904 DYNAPQ8N1N2 210 aa7.54□□□□□ -1.2
LINC01539-201ENST00000587904 HLA-DRB4X5D2U9 266 aa7.54□□□□□ -1.2
LINC01539-201ENST00000587904 J3QKU1 62 aa7.53□□□□□ -1.2
LINC01539-201ENST00000587904 TEN1Q86WV5 123 aa7.53□□□□□ -1.2
LINC01539-201ENST00000587904 OR13C6PQ8NH95 151 aa7.53□□□□□ -1.2
LINC01539-201ENST00000587904 MCRIP2Q9BUT9 160 aaKnown RBP7.53□□□□□ -1.2
LINC01539-201ENST00000587904 NHP2Q9NX24 153 aaKnown RBP7.53□□□□□ -1.2
LINC01539-201ENST00000587904 ARHGAP32A7KAX9 2087 aa7.53□□□□□ -1.2
LINC01539-201ENST00000587904 A0A1B0GX51 115 aa7.53□□□□□ -1.2
LINC01539-201ENST00000587904 I3L2K1 104 aa7.53□□□□□ -1.2
LINC01539-201ENST00000587904 K7ERJ3 54 aa7.53□□□□□ -1.2
LINC01539-201ENST00000587904 SNCGO76070 127 aa7.53□□□□□ -1.2
LINC01539-201ENST00000587904 SLC25A16P16260 332 aa7.53□□□□□ -1.2
LINC01539-201ENST00000587904 C10orf113Q5VZT2 155 aa7.53□□□□□ -1.2
LINC01539-201ENST00000587904 MRAPQ8TCY5 172 aa7.53□□□□□ -1.2
LINC01539-201ENST00000587904 AJUBAQ96IF1 538 aa7.53□□□□□ -1.2
LINC01539-201ENST00000587904 LINC00479Q96M42 142 aa7.53□□□□□ -1.2
LINC01539-201ENST00000587904 CHAC1Q9BUX1 264 aa7.53□□□□□ -1.2
LINC01539-201ENST00000587904 COL12A1Q99715 3063 aa7.52□□□□□ -1.21
LINC01539-201ENST00000587904 NCBP2LA6PVI3 153 aaKnown RBP7.52□□□□□ -1.21
LINC01539-201ENST00000587904 PPIFP30405 207 aaKnown RBP7.52□□□□□ -1.21
LINC01539-201ENST00000587904 FAM106AQ4KMX7 169 aa7.52□□□□□ -1.21
LINC01539-201ENST00000587904 OR10J6PQ8NGY7 276 aa7.52□□□□□ -1.21
LINC01539-201ENST00000587904 CARD19Q96LW7 228 aa7.52□□□□□ -1.21
LINC01539-201ENST00000587904 MRPL36Q9P0J6 103 aaKnown RBP7.52□□□□□ -1.21
LINC01539-201ENST00000587904 SPTAN1Q13813 2472 aaKnown RBP7.52□□□□□ -1.21
LINC01539-201ENST00000587904 IGHV4-30-2A0A087WSY4 118 aa7.51□□□□□ -1.21
LINC01539-201ENST00000587904 NPIPB6E9PJ23 425 aa7.51□□□□□ -1.21
LINC01539-201ENST00000587904 J3KT08 172 aa7.51□□□□□ -1.21
LINC01539-201ENST00000587904 NCR2O95944 276 aa7.51□□□□□ -1.21
LINC01539-201ENST00000587904 CSN3P07498 182 aa7.51□□□□□ -1.21
LINC01539-201ENST00000587904 CD24P25063 80 aa7.51□□□□□ -1.21
LINC01539-201ENST00000587904 SMCPP49901 116 aaPredicted RBP7.51□□□□□ -1.21
LINC01539-201ENST00000587904 C12orf74Q32Q52 190 aa7.51□□□□□ -1.21
LINC01539-201ENST00000587904 RASL10AQ92737 203 aa7.51□□□□□ -1.21
LINC01539-201ENST00000587904 DLX4Q92988 240 aaPredicted RBP7.51□□□□□ -1.21
LINC01539-201ENST00000587904 DUX5Q96PT3 197 aa7.51□□□□□ -1.21
LINC01539-201ENST00000587904 MAST4O15021 2626 aa7.51□□□□□ -1.21
LINC01539-201ENST00000587904 IGHV1-69DA0A0B4J2H0 117 aa7.51□□□□□ -1.21
LINC01539-201ENST00000587904 IGHV1-69P01742 117 aa7.51□□□□□ -1.21
LINC01539-201ENST00000587904 MSMBP08118 114 aa7.51□□□□□ -1.21
LINC01539-201ENST00000587904 APELAP0DMC3 54 aa7.51□□□□□ -1.21
LINC01539-201ENST00000587904 CAMPP49913 170 aa7.51□□□□□ -1.21
LINC01539-201ENST00000587904 ANXA2RQ3ZCQ2 193 aa7.51□□□□□ -1.21
LINC01539-201ENST00000587904 AMTNQ6UX39 209 aa7.51□□□□□ -1.21
LINC01539-201ENST00000587904 Q8N9W7 124 aa7.51□□□□□ -1.21
LINC01539-201ENST00000587904 TMEM190Q8WZ59 177 aa7.51□□□□□ -1.21
LINC01539-201ENST00000587904 ZNF503Q96F45 646 aa7.51□□□□□ -1.21
LINC01539-201ENST00000587904 FAM167A-AS1Q96KT0 104 aa7.51□□□□□ -1.21
LINC01539-201ENST00000587904 LINC01587Q99440 93 aa7.51□□□□□ -1.21
LINC01539-201ENST00000587904 SLC25A2Q9BXI2 301 aa7.51□□□□□ -1.21
LINC01539-201ENST00000587904 TRBV20-1A0A075B6N2 111 aa7.5□□□□□ -1.21
LINC01539-201ENST00000587904 B4DSR2 109 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms