RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 VPS25Q9BRG1 176 aa14.34□□□□□ -0.11
DDX39A-206ENST00000587730 ABCA1O95477 2261 aa14.34□□□□□ -0.11
DDX39A-206ENST00000587730 PRSS1P07477 247 aa14.34□□□□□ -0.11
DDX39A-206ENST00000587730 HLA-DMBP28068 263 aa14.34□□□□□ -0.11
DDX39A-206ENST00000587730 KLRB1Q12918 225 aa14.34□□□□□ -0.11
DDX39A-206ENST00000587730 C9orf47Q6ZRZ4 202 aa14.34□□□□□ -0.11
DDX39A-206ENST00000587730 OR2K2Q8NGT1 345 aa14.34□□□□□ -0.11
DDX39A-206ENST00000587730 UQCRFS1P47985 274 aa14.33□□□□□ -0.12
DDX39A-206ENST00000587730 SRSF1Q07955 248 aaKnown RBP eCLIP14.33□□□□□ -0.122e-6■■□□□ 13.9
DDX39A-206ENST00000587730 MSRB1Q9NZV6 116 aa14.33□□□□□ -0.12
DDX39A-206ENST00000587730 DKK2Q9UBU2 259 aa14.33□□□□□ -0.12
DDX39A-206ENST00000587730 ERCC8Q13216 396 aa14.32□□□□□ -0.12
DDX39A-206ENST00000587730 ECSCRQ19T08 205 aa14.32□□□□□ -0.12
DDX39A-206ENST00000587730 MRAP2Q96G30 205 aa14.32□□□□□ -0.12
DDX39A-206ENST00000587730 KALRNO60229 2985 aa14.32□□□□□ -0.12
DDX39A-206ENST00000587730 SPTA1P02549 2419 aa14.32□□□□□ -0.12
DDX39A-206ENST00000587730 SMIM13P0DJ93 91 aa14.31□□□□□ -0.12
DDX39A-206ENST00000587730 PRB4P10163 310 aaPredicted RBP14.31□□□□□ -0.12
DDX39A-206ENST00000587730 ADORA2A-AS1P86434 159 aa14.31□□□□□ -0.12
DDX39A-206ENST00000587730 IGFL4Q6B9Z1 124 aa14.31□□□□□ -0.12
DDX39A-206ENST00000587730 MYOZ3Q8TDC0 251 aa14.31□□□□□ -0.12
DDX39A-206ENST00000587730 AGPAT4-IT1Q9H0P7 198 aa14.31□□□□□ -0.12
DDX39A-206ENST00000587730 U3KQE9 123 aa14.31□□□□□ -0.12
DDX39A-206ENST00000587730 CLPSL1A2RUU4 121 aa14.31□□□□□ -0.12
DDX39A-206ENST00000587730 H3BUT2 72 aa14.31□□□□□ -0.12
DDX39A-206ENST00000587730 K7EMI3 77 aa14.31□□□□□ -0.12
DDX39A-206ENST00000587730 ATP6V0E1O15342 81 aa14.31□□□□□ -0.12
DDX39A-206ENST00000587730 LY6DQ14210 128 aa14.31□□□□□ -0.12
DDX39A-206ENST00000587730 LAGE3Q14657 143 aa14.31□□□□□ -0.12
DDX39A-206ENST00000587730 C21orf62-AS1Q17RA5 79 aa14.31□□□□□ -0.12
DDX39A-206ENST00000587730 BBC3Q96PG8 261 aaPredicted RBP14.31□□□□□ -0.12
DDX39A-206ENST00000587730 HHLA3Q9XRX5 114 aa14.31□□□□□ -0.12
DDX39A-206ENST00000587730 IGLV2-18A0A075B6J9 118 aa14.3□□□□□ -0.12
DDX39A-206ENST00000587730 IGKV3D-20A0A0C4DH25 116 aa14.3□□□□□ -0.12
DDX39A-206ENST00000587730 PRAC2D3DTV9 90 aa14.3□□□□□ -0.12
DDX39A-206ENST00000587730 FABP2P12104 132 aa14.3□□□□□ -0.12
DDX39A-206ENST00000587730 ZFP36P26651 326 aaKnown RBP14.3□□□□□ -0.12
DDX39A-206ENST00000587730 FXYD7P58549 80 aa14.3□□□□□ -0.12
DDX39A-206ENST00000587730 PCP2Q8IVA1 136 aa14.3□□□□□ -0.12
DDX39A-206ENST00000587730 TMEM158Q8WZ71 300 aa14.3□□□□□ -0.12
DDX39A-206ENST00000587730 CCDC140Q96MF4 163 aa14.3□□□□□ -0.12
DDX39A-206ENST00000587730 C18orf15Q96N68 181 aa14.3□□□□□ -0.12
DDX39A-206ENST00000587730 A0A1W2PPM0 123 aa14.29□□□□□ -0.12
DDX39A-206ENST00000587730 FAM223BA6NKX1 122 aa14.29□□□□□ -0.12
DDX39A-206ENST00000587730 PLNP26678 52 aa14.29□□□□□ -0.12
DDX39A-206ENST00000587730 TAL2Q16559 108 aa14.29□□□□□ -0.12
DDX39A-206ENST00000587730 C9orf139Q6ZV77 190 aa14.29□□□□□ -0.12
DDX39A-206ENST00000587730 FAM223AQ8IWN6 122 aa14.29□□□□□ -0.12
DDX39A-206ENST00000587730 POLEQ07864 2286 aa14.29□□□□□ -0.12
DDX39A-206ENST00000587730 SMIM17P0DL12 118 aa14.29□□□□□ -0.12
DDX39A-206ENST00000587730 FOXE3Q13461 319 aa14.29□□□□□ -0.12
DDX39A-206ENST00000587730 CLEC19AQ6UXS0 136 aa14.29□□□□□ -0.12
DDX39A-206ENST00000587730 C8orf86Q6ZUL3 223 aa14.29□□□□□ -0.12
DDX39A-206ENST00000587730 PCNX1Q96RV3 2341 aa14.29□□□□□ -0.12
DDX39A-206ENST00000587730 ATP5G2Q06055 141 aa14.28□□□□□ -0.12
DDX39A-206ENST00000587730 RNF182Q8N6D2 247 aa14.28□□□□□ -0.12
DDX39A-206ENST00000587730 FOXC2Q99958 501 aa14.28□□□□□ -0.12
DDX39A-206ENST00000587730 TRAV8-2A0A0B4J237 113 aa14.27□□□□□ -0.12
DDX39A-206ENST00000587730 IGHV7-4-1A0A0J9YVY3 117 aa14.27□□□□□ -0.13
DDX39A-206ENST00000587730 CENPVL3A0A0U1RRI6 287 aa14.27□□□□□ -0.13
DDX39A-206ENST00000587730 SLC25A16P16260 332 aa14.27□□□□□ -0.13
DDX39A-206ENST00000587730 SAA4P35542 130 aa14.27□□□□□ -0.13
DDX39A-206ENST00000587730 EFNA4P52798 201 aa14.27□□□□□ -0.13
DDX39A-206ENST00000587730 SPANXN1Q5VSR9 72 aa14.27□□□□□ -0.13
DDX39A-206ENST00000587730 NRACQ8N912 160 aa14.27□□□□□ -0.13
DDX39A-206ENST00000587730 AJUBAQ96IF1 538 aa14.27□□□□□ -0.13
DDX39A-206ENST00000587730 CHAC1Q9BUX1 264 aa14.27□□□□□ -0.13
DDX39A-206ENST00000587730 TM2D2Q9BX73 214 aa14.27□□□□□ -0.13
DDX39A-206ENST00000587730 ANKHD1Q8IWZ3 2542 aaKnown RBP14.26□□□□□ -0.13
DDX39A-206ENST00000587730 IGHV3-35A0A0C4DH35 117 aa14.26□□□□□ -0.13
DDX39A-206ENST00000587730 CRIP2P52943 208 aaPredicted RBP14.26□□□□□ -0.13
DDX39A-206ENST00000587730 LINC00477Q96M19 166 aa14.26□□□□□ -0.13
DDX39A-206ENST00000587730 JMJD8Q96S16 334 aa14.26□□□□□ -0.13
DDX39A-206ENST00000587730 SPCS1Q9Y6A9 102 aa14.26□□□□□ -0.13
DDX39A-206ENST00000587730 A0A087WX48 190 aa14.25□□□□□ -0.13
DDX39A-206ENST00000587730 TRAV12-1A0A0B4J245 112 aa14.25□□□□□ -0.13
DDX39A-206ENST00000587730 MED14OSP0DP75 135 aa14.25□□□□□ -0.13
DDX39A-206ENST00000587730 ORMDL2Q53FV1 153 aa14.25□□□□□ -0.13
DDX39A-206ENST00000587730 WFDC3Q8IUB2 231 aa14.25□□□□□ -0.13
DDX39A-206ENST00000587730 IGHV3OR16-8A0A075B7F1 116 aa14.25□□□□□ -0.13
DDX39A-206ENST00000587730 NPFFO15130 113 aa14.25□□□□□ -0.13
DDX39A-206ENST00000587730 ZC2HC1BQ5TFG8 222 aa14.25□□□□□ -0.13
DDX39A-206ENST00000587730 SAMD5Q5TGI4 173 aa14.25□□□□□ -0.13
DDX39A-206ENST00000587730 C20orf78Q9BR46 151 aa14.25□□□□□ -0.13
DDX39A-206ENST00000587730 C11orf21Q9P2W6 132 aa14.25□□□□□ -0.13
DDX39A-206ENST00000587730 OVOL1O14753 267 aa14.24□□□□□ -0.13
DDX39A-206ENST00000587730 PPP1R17O96001 155 aa14.24□□□□□ -0.13
DDX39A-206ENST00000587730 GCSHP23434 173 aa14.24□□□□□ -0.13
DDX39A-206ENST00000587730 C5orf56Q8N8D9 126 aa14.24□□□□□ -0.13
DDX39A-206ENST00000587730 C16orf92Q96LL3 132 aa14.24□□□□□ -0.13
DDX39A-206ENST00000587730 TRBV25-1A0A075B6N4 114 aa14.23□□□□□ -0.13
DDX39A-206ENST00000587730 TRBV7-9A0A0J9YWB2 115 aa14.23□□□□□ -0.13
DDX39A-206ENST00000587730 LINC01619G3V211 115 aa14.23□□□□□ -0.13
DDX39A-206ENST00000587730 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.23□□□□□ -0.13
DDX39A-206ENST00000587730 PPIFP30405 207 aaKnown RBP14.23□□□□□ -0.13
DDX39A-206ENST00000587730 MOB4Q9Y3A3 225 aa14.23□□□□□ -0.13
DDX39A-206ENST00000587730 UFC1Q9Y3C8 167 aa14.23□□□□□ -0.13
DDX39A-206ENST00000587730 GCN1Q92616 2671 aaKnown RBP14.23□□□□□ -0.13
DDX39A-206ENST00000587730 BRI3O95415 125 aa14.22□□□□□ -0.13
DDX39A-206ENST00000587730 TRGV3P03979 118 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms