RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-222	ENST00000584377		J3QR89	54 aa		10.24	□□□□□ -0.77
CSNK1D-222	ENST00000584377	NPFF	O15130	113 aa		10.24	□□□□□ -0.77
CSNK1D-222	ENST00000584377	HLA-DMB	P28068	263 aa		10.24	□□□□□ -0.77
CSNK1D-222	ENST00000584377	FOXI2	Q6ZQN5	318 aa		10.24	□□□□□ -0.77
CSNK1D-222	ENST00000584377	COX8C	Q7Z4L0	72 aa		10.24	□□□□□ -0.77
CSNK1D-222	ENST00000584377	VGLL1	Q99990	258 aa		10.24	□□□□□ -0.77
CSNK1D-222	ENST00000584377	AP5S1	Q9NUS5	200 aa		10.24	□□□□□ -0.77
CSNK1D-222	ENST00000584377	CENPVL3	A0A0U1RRI6	287 aa		10.23	□□□□□ -0.77
CSNK1D-222	ENST00000584377	SIVA1	O15304	175 aa		10.23	□□□□□ -0.77
CSNK1D-222	ENST00000584377	IGHG4	P01861	327 aa		10.23	□□□□□ -0.77
CSNK1D-222	ENST00000584377	PRORY	Q9H606	182 aa		10.23	□□□□□ -0.77
CSNK1D-222	ENST00000584377	LINC01548	A6NM66	108 aa		10.23	□□□□□ -0.77
CSNK1D-222	ENST00000584377	SMIM13	P0DJ93	91 aa		10.23	□□□□□ -0.77
CSNK1D-222	ENST00000584377	GNLY	P22749	145 aa		10.23	□□□□□ -0.77
CSNK1D-222	ENST00000584377	CFAP161	Q6P656	301 aa		10.23	□□□□□ -0.77
CSNK1D-222	ENST00000584377	ZNF493	Q6ZR52	646 aa		10.23	□□□□□ -0.77
CSNK1D-222	ENST00000584377	ZFAND3	Q9H8U3	227 aa		10.23	□□□□□ -0.77
CSNK1D-222	ENST00000584377	SPANXB1	Q9NS25	103 aa	Predicted RBP	10.23	□□□□□ -0.77
CSNK1D-222	ENST00000584377	KLK9	Q2XQG4	91 aa		10.22	□□□□□ -0.77
CSNK1D-222	ENST00000584377	KLK9	Q9UKQ9	250 aa		10.22	□□□□□ -0.77
CSNK1D-222	ENST00000584377	TMEM213	A2RRL7	107 aa		10.22	□□□□□ -0.77
CSNK1D-222	ENST00000584377	BUB3	O43684	328 aa		10.22	□□□□□ -0.77
CSNK1D-222	ENST00000584377	TM4SF20	Q53R12	229 aa		10.22	□□□□□ -0.77
CSNK1D-222	ENST00000584377	CLEC19A	Q6UXS0	136 aa		10.22	□□□□□ -0.77
CSNK1D-222	ENST00000584377	MRAP2	Q96G30	205 aa		10.22	□□□□□ -0.77
CSNK1D-222	ENST00000584377	CCDC140	Q96MF4	163 aa		10.22	□□□□□ -0.77
CSNK1D-222	ENST00000584377	GEMIN7	Q9H840	131 aa	Known RBP	10.22	□□□□□ -0.77
CSNK1D-222	ENST00000584377	WFDC2	Q14508	124 aa		10.21	□□□□□ -0.77
CSNK1D-222	ENST00000584377	ZNF80	P51504	273 aa	Predicted RBP	10.21	□□□□□ -0.78
CSNK1D-222	ENST00000584377	OR8A1	Q8NGG7	326 aa		10.21	□□□□□ -0.78
CSNK1D-222	ENST00000584377	PRSS3P2	Q8NHM4	247 aa		10.21	□□□□□ -0.78
CSNK1D-222	ENST00000584377	IGHV3-66	A0A0C4DH42	116 aa		10.2	□□□□□ -0.78
CSNK1D-222	ENST00000584377	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	10.2	□□□□□ -0.78
CSNK1D-222	ENST00000584377	PCP2	Q8IVA1	136 aa		10.2	□□□□□ -0.78
CSNK1D-222	ENST00000584377	C5orf56	Q8N8D9	126 aa		10.2	□□□□□ -0.78
CSNK1D-222	ENST00000584377	EEF1AKMT3	Q96AZ1	226 aa		10.2	□□□□□ -0.78
CSNK1D-222	ENST00000584377	SPAG8	Q99932	426 aa	Predicted RBP	10.2	□□□□□ -0.78
CSNK1D-222	ENST00000584377		D6R8Y8	96 aa		10.2	□□□□□ -0.78
CSNK1D-222	ENST00000584377	IGHV4-39	P01824	125 aa		10.2	□□□□□ -0.78
CSNK1D-222	ENST00000584377	AMN1	Q8IY45	258 aa		10.2	□□□□□ -0.78
CSNK1D-222	ENST00000584377	C18orf15	Q96N68	181 aa		10.2	□□□□□ -0.78
CSNK1D-222	ENST00000584377	FAM104B	Q5XKR9	115 aa		10.2	□□□□□ -0.78
CSNK1D-222	ENST00000584377	TMEM219	Q86XT9	240 aa		10.2	□□□□□ -0.78
CSNK1D-222	ENST00000584377	IGHV3OR16-13	A0A075B7E8	117 aa		10.19	□□□□□ -0.78
CSNK1D-222	ENST00000584377	IGHV3OR16-10	A0A075B7F0	116 aa		10.19	□□□□□ -0.78
CSNK1D-222	ENST00000584377	IGHV3-74	A0A0B4J1X5	117 aa		10.19	□□□□□ -0.78
CSNK1D-222	ENST00000584377	CLPSL1	A2RUU4	121 aa		10.19	□□□□□ -0.78
CSNK1D-222	ENST00000584377	SH2D6	Q7Z4S9	175 aa		10.19	□□□□□ -0.78
CSNK1D-222	ENST00000584377	RNF182	Q8N6D2	247 aa		10.19	□□□□□ -0.78
CSNK1D-222	ENST00000584377	TRBV7-1	A0A0A6YYK4	115 aa		10.19	□□□□□ -0.78
CSNK1D-222	ENST00000584377	PRAC2	D3DTV9	90 aa		10.19	□□□□□ -0.78
CSNK1D-222	ENST00000584377		F8W1H4	67 aa		10.19	□□□□□ -0.78
CSNK1D-222	ENST00000584377	NMU	P48645	174 aa		10.19	□□□□□ -0.78
CSNK1D-222	ENST00000584377	ERCC8	Q13216	396 aa		10.19	□□□□□ -0.78
CSNK1D-222	ENST00000584377	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		10.19	□□□□□ -0.78
CSNK1D-222	ENST00000584377	GCSH	P23434	173 aa		10.18	□□□□□ -0.78
CSNK1D-222	ENST00000584377	IFI27	P40305	119 aa	Predicted RBP	10.18	□□□□□ -0.78
CSNK1D-222	ENST00000584377	FXYD2	P54710	66 aa		10.18	□□□□□ -0.78
CSNK1D-222	ENST00000584377	LGALS9B	Q3B8N2	356 aa		10.18	□□□□□ -0.78
CSNK1D-222	ENST00000584377	ETDB	Q3ZM63	59 aa		10.18	□□□□□ -0.78
CSNK1D-222	ENST00000584377	LGALS9C	Q6DKI2	356 aa		10.18	□□□□□ -0.78
CSNK1D-222	ENST00000584377	ORMDL3	Q8N138	153 aa		10.18	□□□□□ -0.78
CSNK1D-222	ENST00000584377		A6NJY4	79 aa		10.18	□□□□□ -0.78
CSNK1D-222	ENST00000584377	ORM1	P02763	201 aa		10.18	□□□□□ -0.78
CSNK1D-222	ENST00000584377	ATP5G2	Q06055	141 aa		10.18	□□□□□ -0.78
CSNK1D-222	ENST00000584377	TWIST1	Q15672	202 aa		10.18	□□□□□ -0.78
CSNK1D-222	ENST00000584377	FAM106A	Q4KMX7	169 aa		10.18	□□□□□ -0.78
CSNK1D-222	ENST00000584377	PRELID3A	Q96N28	172 aa		10.18	□□□□□ -0.78
CSNK1D-222	ENST00000584377	SLC50A1	Q9BRV3	221 aa		10.18	□□□□□ -0.78
CSNK1D-222	ENST00000584377	IGHV3-49	A0A0A0MS15	119 aa		10.17	□□□□□ -0.78
CSNK1D-222	ENST00000584377	LOC389332	A0A1B0GUA5	103 aa		10.17	□□□□□ -0.78
CSNK1D-222	ENST00000584377		K7ERJ3	54 aa		10.17	□□□□□ -0.78
CSNK1D-222	ENST00000584377	CACNG7	P62955	275 aa		10.17	□□□□□ -0.78
CSNK1D-222	ENST00000584377	METTL26	Q96S19	204 aa		10.17	□□□□□ -0.78
CSNK1D-222	ENST00000584377	MOB4	Q9Y3A3	225 aa		10.17	□□□□□ -0.78
CSNK1D-222	ENST00000584377		U3KQK5	164 aa		10.17	□□□□□ -0.78
CSNK1D-222	ENST00000584377		A0A096LNJ9	63 aa		10.17	□□□□□ -0.78
CSNK1D-222	ENST00000584377	FABP5P3	A8MUU1	101 aa		10.17	□□□□□ -0.78
CSNK1D-222	ENST00000584377	IGLC6	P0CF74	106 aa		10.17	□□□□□ -0.78
CSNK1D-222	ENST00000584377	PAX8	Q06710	450 aa		10.17	□□□□□ -0.78
CSNK1D-222	ENST00000584377	PKD1L2	Q7Z442	2459 aa		10.17	□□□□□ -0.78
CSNK1D-222	ENST00000584377	MRPL51	Q4U2R6	128 aa	Known RBP	10.16	□□□□□ -0.78
CSNK1D-222	ENST00000584377	MRPL16	Q9NX20	251 aa	Known RBP	10.16	□□□□□ -0.78
CSNK1D-222	ENST00000584377	SIGLEC8	Q9NYZ4	499 aa		10.16	□□□□□ -0.78
CSNK1D-222	ENST00000584377	TRAV41	A0A0B4J266	112 aa		10.16	□□□□□ -0.78
CSNK1D-222	ENST00000584377	RBAKDN	A6NC62	111 aa		10.16	□□□□□ -0.78
CSNK1D-222	ENST00000584377	SRSF2	Q01130	221 aa	Known RBP	10.16	□□□□□ -0.78
CSNK1D-222	ENST00000584377	BRD3OS	Q6XYD6	125 aa		10.16	□□□□□ -0.78
CSNK1D-222	ENST00000584377	ZNF575	Q86XF7	245 aa		10.16	□□□□□ -0.78
CSNK1D-222	ENST00000584377	LINC00527	Q9UJ94	153 aa		10.16	□□□□□ -0.78
CSNK1D-222	ENST00000584377	ABCA2	Q9BZC7	2435 aa		10.16	□□□□□ -0.78
CSNK1D-222	ENST00000584377	IGHV1-69D	A0A0B4J2H0	117 aa		10.16	□□□□□ -0.78
CSNK1D-222	ENST00000584377	IGHV1-69	P01742	117 aa		10.16	□□□□□ -0.78
CSNK1D-222	ENST00000584377	LOXL1	Q08397	574 aa	Predicted RBP	10.16	□□□□□ -0.78
CSNK1D-222	ENST00000584377	IL17REL	Q6ZVW7	336 aa		10.16	□□□□□ -0.78
CSNK1D-222	ENST00000584377	PHLDA1	Q8WV24	401 aa	Predicted RBP	10.16	□□□□□ -0.78
CSNK1D-222	ENST00000584377	COL12A1	Q99715	3063 aa		10.15	□□□□□ -0.78
CSNK1D-222	ENST00000584377	TRAV40	A0A0B4J280	105 aa		10.15	□□□□□ -0.78
CSNK1D-222	ENST00000584377	INSL3	P51460	131 aa		10.15	□□□□□ -0.78
CSNK1D-222	ENST00000584377	MTURN	Q8N3F0	131 aa		10.15	□□□□□ -0.78

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