RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 TCTEX1D1Q8N7M0 179 aa-0.24□□□□□ -2.45
SKA2-210ENST00000584089 C5orf56Q8N8D9 126 aa-0.24□□□□□ -2.45
SKA2-210ENST00000584089 NUP35Q8NFH5 326 aa-0.24□□□□□ -2.45
SKA2-210ENST00000584089 MALSU1Q96EH3 234 aa-0.24□□□□□ -2.45
SKA2-210ENST00000584089 DMAC1Q96GE9 116 aa-0.24□□□□□ -2.45
SKA2-210ENST00000584089 PRR15LQ9BU68 103 aa-0.24□□□□□ -2.45
SKA2-210ENST00000584089 OR2H1Q9GZK4 316 aa-0.24□□□□□ -2.45
SKA2-210ENST00000584089 LAMTOR3Q9UHA4 124 aa-0.24□□□□□ -2.45
SKA2-210ENST00000584089 TCOF1Q13428 1488 aaKnown RBP-0.24□□□□□ -2.45
SKA2-210ENST00000584089 MACF1Q9UPN3 7388 aaKnown RBP-0.24□□□□□ -2.45
SKA2-210ENST00000584089 VIRMAQ69YN4 1812 aaKnown RBP-0.24□□□□□ -2.45
SKA2-210ENST00000584089 MYH1P12882 1939 aa-0.25□□□□□ -2.45
SKA2-210ENST00000584089 PKD1L1Q8TDX9 2849 aa-0.25□□□□□ -2.45
SKA2-210ENST00000584089 TRAV12-2A0A075B6T6 113 aa-0.25□□□□□ -2.45
SKA2-210ENST00000584089 TEX49A0A1B0GTD5 131 aa-0.25□□□□□ -2.45
SKA2-210ENST00000584089 ARL5CA6NH57 179 aa-0.25□□□□□ -2.45
SKA2-210ENST00000584089 IFITM5A6NNB3 132 aa-0.25□□□□□ -2.45
SKA2-210ENST00000584089 SAA1P0DJI8 122 aaPredicted RBP-0.25□□□□□ -2.45
SKA2-210ENST00000584089 SDC4P31431 198 aa-0.25□□□□□ -2.45
SKA2-210ENST00000584089 DNAJB13P59910 316 aa-0.25□□□□□ -2.45
SKA2-210ENST00000584089 MRPS36P82909 103 aaKnown RBP-0.25□□□□□ -2.45
SKA2-210ENST00000584089 VMA21Q3ZAQ7 101 aa-0.25□□□□□ -2.45
SKA2-210ENST00000584089 C1orf140Q5VVS0 124 aa-0.25□□□□□ -2.45
SKA2-210ENST00000584089 ZCCHC23Q6ZST2 131 aa-0.25□□□□□ -2.45
SKA2-210ENST00000584089 OR4B1Q8NGF8 309 aa-0.25□□□□□ -2.45
SKA2-210ENST00000584089 OR5AK2Q8NH90 309 aa-0.25□□□□□ -2.45
SKA2-210ENST00000584089 DGCR14Q96DF8 476 aaKnown RBP-0.25□□□□□ -2.45
SKA2-210ENST00000584089 CIB3Q96Q77 187 aaPredicted RBP-0.25□□□□□ -2.45
SKA2-210ENST00000584089 OR4C12Q96R67 309 aa-0.25□□□□□ -2.45
SKA2-210ENST00000584089 DSCR8Q96T75 97 aa-0.25□□□□□ -2.45
SKA2-210ENST00000584089 PAIP2Q9BPZ3 127 aaKnown RBP-0.25□□□□□ -2.45
SKA2-210ENST00000584089 BPESC1Q9GZL8 116 aa-0.25□□□□□ -2.45
SKA2-210ENST00000584089 SH3BGRL3Q9H299 93 aa-0.25□□□□□ -2.45
SKA2-210ENST00000584089 NAT8BQ9UHF3 227 aa-0.25□□□□□ -2.45
SKA2-210ENST00000584089 TPRKBQ9Y3C4 175 aa-0.25□□□□□ -2.45
SKA2-210ENST00000584089 DSPPQ9NZW4 1301 aa-0.25□□□□□ -2.45
SKA2-210ENST00000584089 LRP2P98164 4655 aa-0.25□□□□□ -2.45
SKA2-210ENST00000584089 NHSL1Q5SYE7 1610 aa-0.25□□□□□ -2.45
SKA2-210ENST00000584089 LAMB1P07942 1786 aa-0.25□□□□□ -2.45
SKA2-210ENST00000584089 EP300Q09472 2414 aaPredicted RBP-0.25□□□□□ -2.45
SKA2-210ENST00000584089 DSTQ03001 7570 aaKnown RBP-0.25□□□□□ -2.45
SKA2-210ENST00000584089 ANKRD17O75179 2603 aaKnown RBP-0.25□□□□□ -2.45
SKA2-210ENST00000584089 PDZD2O15018 2839 aa-0.26□□□□□ -2.45
SKA2-210ENST00000584089 PIEZO2Q9H5I5 2752 aa-0.26□□□□□ -2.45
SKA2-210ENST00000584089 GVINP1Q7Z2Y8 2422 aa-0.26□□□□□ -2.45
SKA2-210ENST00000584089 PLCE1Q9P212 2302 aa-0.26□□□□□ -2.45
SKA2-210ENST00000584089 TANC2Q9HCD6 1990 aa-0.26□□□□□ -2.45
SKA2-210ENST00000584089 MYH3P11055 1940 aa-0.26□□□□□ -2.45
SKA2-210ENST00000584089 ARAP1Q96P48 1450 aa-0.26□□□□□ -2.45
SKA2-210ENST00000584089 PTPRGP23470 1445 aa-0.26□□□□□ -2.45
SKA2-210ENST00000584089 YTHDC2Q9H6S0 1430 aaKnown RBP-0.26□□□□□ -2.45
SKA2-210ENST00000584089 FXYD1O00168 92 aa-0.26□□□□□ -2.45
SKA2-210ENST00000584089 CST7O76096 145 aa-0.26□□□□□ -2.45
SKA2-210ENST00000584089 TRACP01848 142 aa-0.26□□□□□ -2.45
SKA2-210ENST00000584089 FABP4P15090 132 aa-0.26□□□□□ -2.45
SKA2-210ENST00000584089 SRP9P49458 86 aaKnown RBP-0.26□□□□□ -2.45
SKA2-210ENST00000584089 HBBP68871 147 aa-0.26□□□□□ -2.45
SKA2-210ENST00000584089 FADDQ13158 208 aa-0.26□□□□□ -2.45
SKA2-210ENST00000584089 HACD4Q5VWC8 232 aa-0.26□□□□□ -2.45
SKA2-210ENST00000584089 NEK7Q8TDX7 302 aa-0.26□□□□□ -2.45
SKA2-210ENST00000584089 AP3S1Q92572 193 aa-0.26□□□□□ -2.45
SKA2-210ENST00000584089 DIRC1Q969H9 104 aa-0.26□□□□□ -2.45
SKA2-210ENST00000584089 LYRM2Q9NU23 88 aaPredicted RBP-0.26□□□□□ -2.45
SKA2-210ENST00000584089 SSR3Q9UNL2 185 aa-0.26□□□□□ -2.45
SKA2-210ENST00000584089 MPC1Q9Y5U8 109 aa-0.26□□□□□ -2.45
SKA2-210ENST00000584089 COL6A3P12111 3177 aa-0.26□□□□□ -2.45
SKA2-210ENST00000584089 VWFP04275 2813 aa-0.26□□□□□ -2.45
SKA2-210ENST00000584089 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.26□□□□□ -2.45
SKA2-210ENST00000584089 TNXBP22105 4242 aa-0.26□□□□□ -2.45
SKA2-210ENST00000584089 CREBBPQ92793 2442 aa-0.26□□□□□ -2.45
SKA2-210ENST00000584089 MUC12Q9UKN1 5478 aa-0.26□□□□□ -2.45
SKA2-210ENST00000584089 CSPG4Q6UVK1 2322 aa-0.26□□□□□ -2.45
SKA2-210ENST00000584089 MUC2Q02817 5179 aa-0.26□□□□□ -2.45
SKA2-210ENST00000584089 AKAP11Q9UKA4 1901 aa-0.26□□□□□ -2.45
SKA2-210ENST00000584089 SETXQ7Z333 2677 aaKnown RBP-0.27□□□□□ -2.45
SKA2-210ENST00000584089 MYCBP2O75592 4640 aa-0.27□□□□□ -2.45
SKA2-210ENST00000584089 DLC1Q96QB1 1528 aa-0.27□□□□□ -2.45
SKA2-210ENST00000584089 EIF3AQ14152 1382 aaKnown RBP-0.27□□□□□ -2.45
SKA2-210ENST00000584089 BBIP1A8MTZ0 92 aa-0.27□□□□□ -2.45
SKA2-210ENST00000584089 F2Z2F3 143 aa-0.27□□□□□ -2.45
SKA2-210ENST00000584089 H3BQV1 296 aa-0.27□□□□□ -2.45
SKA2-210ENST00000584089 KPNA4O00629 521 aaPredicted RBP-0.27□□□□□ -2.45
SKA2-210ENST00000584089 MPC1LP0DKB6 136 aa-0.27□□□□□ -2.45
SKA2-210ENST00000584089 PHBP35232 272 aa-0.27□□□□□ -2.45
SKA2-210ENST00000584089 NDUFA6P56556 154 aa-0.27□□□□□ -2.45
SKA2-210ENST00000584089 SNRPD3P62318 126 aaKnown RBP-0.27□□□□□ -2.45
SKA2-210ENST00000584089 NEDD8Q15843 81 aa-0.27□□□□□ -2.45
SKA2-210ENST00000584089 ZNF56Q15929 161 aa-0.27□□□□□ -2.45
SKA2-210ENST00000584089 AKR1C8PQ5T2L2 129 aa-0.27□□□□□ -2.45
SKA2-210ENST00000584089 OR8J3Q8NGG0 315 aa-0.27□□□□□ -2.45
SKA2-210ENST00000584089 LINC00208Q96KT6 92 aa-0.27□□□□□ -2.45
SKA2-210ENST00000584089 VPS25Q9BRG1 176 aa-0.27□□□□□ -2.45
SKA2-210ENST00000584089 COA4Q9NYJ1 87 aa-0.27□□□□□ -2.45
SKA2-210ENST00000584089 FLNBO75369 2602 aaKnown RBP-0.27□□□□□ -2.45
SKA2-210ENST00000584089 SIPA1L3O60292 1781 aaPredicted RBP-0.27□□□□□ -2.45
SKA2-210ENST00000584089 KIDINS220Q9ULH0 1771 aa-0.27□□□□□ -2.45
SKA2-210ENST00000584089 DOCK11Q5JSL3 2073 aa-0.28□□□□□ -2.45
SKA2-210ENST00000584089 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.28□□□□□ -2.45
SKA2-210ENST00000584089 HSPG2P98160 4391 aa-0.28□□□□□ -2.45
SKA2-210ENST00000584089 CHD8Q9HCK8 2581 aa-0.28□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms