RNA–Protein interactions for RNA: ENST00000582594.5

PPP4R1-222, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene PPP4R1, Length 2,982 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-222ENST00000582594 SVEP1Q4LDE5 3571 aa7.4□□□□□ -1.22
PPP4R1-222ENST00000582594 ATP5G2Q06055 141 aa7.4□□□□□ -1.23
PPP4R1-222ENST00000582594 SFTA2Q6UW10 78 aa7.4□□□□□ -1.23
PPP4R1-222ENST00000582594 SRSF8Q9BRL6 282 aaKnown RBP7.4□□□□□ -1.23
PPP4R1-222ENST00000582594 MED13LQ71F56 2210 aa7.4□□□□□ -1.23
PPP4R1-222ENST00000582594 IGLV2-18A0A075B6J9 118 aa7.39□□□□□ -1.23
PPP4R1-222ENST00000582594 IGKV3D-20A0A0C4DH25 116 aa7.39□□□□□ -1.23
PPP4R1-222ENST00000582594 Q5PR19 223 aa7.39□□□□□ -1.23
PPP4R1-222ENST00000582594 CCDC144NLQ6NUI1 221 aa7.39□□□□□ -1.23
PPP4R1-222ENST00000582594 COX8CQ7Z4L0 72 aa7.39□□□□□ -1.23
PPP4R1-222ENST00000582594 TTC9CQ8N5M4 171 aa7.39□□□□□ -1.23
PPP4R1-222ENST00000582594 BSNQ9UPA5 3926 aa7.39□□□□□ -1.23
PPP4R1-222ENST00000582594 LINC01546A6NGU7 62 aa7.39□□□□□ -1.23
PPP4R1-222ENST00000582594 F8W1H4 67 aa7.39□□□□□ -1.23
PPP4R1-222ENST00000582594 CTSGP08311 255 aa7.39□□□□□ -1.23
PPP4R1-222ENST00000582594 C5orf64Q2M2E5 130 aa7.39□□□□□ -1.23
PPP4R1-222ENST00000582594 PSMG3-AS1Q96PY0 264 aa7.39□□□□□ -1.23
PPP4R1-222ENST00000582594 J3KRW8 73 aa7.38□□□□□ -1.23
PPP4R1-222ENST00000582594 LAGE3Q14657 143 aa7.38□□□□□ -1.23
PPP4R1-222ENST00000582594 GAGE13Q4V321 117 aa7.38□□□□□ -1.23
PPP4R1-222ENST00000582594 IGFL3Q6UXB1 125 aa7.38□□□□□ -1.23
PPP4R1-222ENST00000582594 WFDC12Q8WWY7 111 aa7.38□□□□□ -1.23
PPP4R1-222ENST00000582594 RNF5Q99942 180 aa7.38□□□□□ -1.23
PPP4R1-222ENST00000582594 DPM3Q9P2X0 92 aa7.38□□□□□ -1.23
PPP4R1-222ENST00000582594 AKAP13Q12802 2813 aa7.38□□□□□ -1.23
PPP4R1-222ENST00000582594 TMEM190Q8WZ59 177 aa7.38□□□□□ -1.23
PPP4R1-222ENST00000582594 SMPXQ9UHP9 88 aa7.38□□□□□ -1.23
PPP4R1-222ENST00000582594 CYSLTR1Q9Y271 337 aa7.38□□□□□ -1.23
PPP4R1-222ENST00000582594 LINC01559Q495D7 138 aa7.38□□□□□ -1.23
PPP4R1-222ENST00000582594 CNFNQ9BYD5 112 aa7.38□□□□□ -1.23
PPP4R1-222ENST00000582594 ANKRD11Q6UB99 2663 aaPredicted RBP7.37□□□□□ -1.23
PPP4R1-222ENST00000582594 A0A087WX48 190 aa7.37□□□□□ -1.23
PPP4R1-222ENST00000582594 A0A1B0GWB2 263 aa7.37□□□□□ -1.23
PPP4R1-222ENST00000582594 J3QR89 54 aa7.37□□□□□ -1.23
PPP4R1-222ENST00000582594 PIP4P1Q86T03 277 aa7.37□□□□□ -1.23
PPP4R1-222ENST00000582594 NRACQ8N912 160 aa7.37□□□□□ -1.23
PPP4R1-222ENST00000582594 CLUHP3Q96NS8 147 aa7.37□□□□□ -1.23
PPP4R1-222ENST00000582594 OTOGLQ3ZCN5 2332 aa7.37□□□□□ -1.23
PPP4R1-222ENST00000582594 RRN3P1Q2M238 152 aa7.37□□□□□ -1.23
PPP4R1-222ENST00000582594 NPBQ8NG41 125 aa7.37□□□□□ -1.23
PPP4R1-222ENST00000582594 DEFB104AQ8WTQ1 72 aa7.37□□□□□ -1.23
PPP4R1-222ENST00000582594 AGPAT4-IT1Q9H0P7 198 aa7.37□□□□□ -1.23
PPP4R1-222ENST00000582594 SPANXN1Q5VSR9 72 aa7.36□□□□□ -1.23
PPP4R1-222ENST00000582594 LINC01560Q8TB33 94 aa7.36□□□□□ -1.23
PPP4R1-222ENST00000582594 ATP6V0BQ99437 205 aa7.36□□□□□ -1.23
PPP4R1-222ENST00000582594 C20orf78Q9BR46 151 aa7.36□□□□□ -1.23
PPP4R1-222ENST00000582594 TRBV7-3A0A075B6L6 115 aa7.36□□□□□ -1.23
PPP4R1-222ENST00000582594 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.36□□□□□ -1.23
PPP4R1-222ENST00000582594 SRSF1Q07955 248 aaKnown RBP eCLIP7.36□□□□□ -1.23
PPP4R1-222ENST00000582594 PSMG4Q5JS54 123 aa7.36□□□□□ -1.23
PPP4R1-222ENST00000582594 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.36□□□□□ -1.23
PPP4R1-222ENST00000582594 SPTBN2O15020 2390 aa7.36□□□□□ -1.23
PPP4R1-222ENST00000582594 H3BVH4 76 aa7.35□□□□□ -1.23
PPP4R1-222ENST00000582594 RAB9AP51151 201 aa7.35□□□□□ -1.23
PPP4R1-222ENST00000582594 ECSCRQ19T08 205 aa7.35□□□□□ -1.23
PPP4R1-222ENST00000582594 PRO0461Q9UI25 63 aa7.35□□□□□ -1.23
PPP4R1-222ENST00000582594 IGHV7-4-1A0A0J9YVY3 117 aa7.35□□□□□ -1.23
PPP4R1-222ENST00000582594 A0A1B0GV72 72 aa7.35□□□□□ -1.23
PPP4R1-222ENST00000582594 OR11H12B2RN74 326 aa7.35□□□□□ -1.23
PPP4R1-222ENST00000582594 B9A039 149 aa7.35□□□□□ -1.23
PPP4R1-222ENST00000582594 CD3EP07766 207 aa7.35□□□□□ -1.23
PPP4R1-222ENST00000582594 SCGB1A1P11684 91 aa7.35□□□□□ -1.23
PPP4R1-222ENST00000582594 SRSF2Q01130 221 aaKnown RBP7.35□□□□□ -1.23
PPP4R1-222ENST00000582594 TCF15Q12870 199 aa7.35□□□□□ -1.23
PPP4R1-222ENST00000582594 ZNF672Q499Z4 452 aaPredicted RBP7.35□□□□□ -1.23
PPP4R1-222ENST00000582594 PRR30Q53SZ7 412 aaPredicted RBP7.35□□□□□ -1.23
PPP4R1-222ENST00000582594 OR11H1Q8NG94 326 aa7.35□□□□□ -1.23
PPP4R1-222ENST00000582594 OR11H2Q8NH07 326 aa7.35□□□□□ -1.23
PPP4R1-222ENST00000582594 SPATA25Q9BR10 227 aa7.35□□□□□ -1.23
PPP4R1-222ENST00000582594 PGPEP1Q9NXJ5 209 aa7.35□□□□□ -1.23
PPP4R1-222ENST00000582594 MYMXA0A1B0GTQ4 84 aa7.35□□□□□ -1.23
PPP4R1-222ENST00000582594 NDUFS8O00217 210 aa7.35□□□□□ -1.23
PPP4R1-222ENST00000582594 CKS1BP61024 79 aa7.35□□□□□ -1.23
PPP4R1-222ENST00000582594 SCGB2A2Q13296 93 aa7.35□□□□□ -1.23
PPP4R1-222ENST00000582594 ZNF48Q96MX3 618 aaPredicted RBP7.35□□□□□ -1.23
PPP4R1-222ENST00000582594 HOXA3O43365 443 aaPredicted RBP7.34□□□□□ -1.23
PPP4R1-222ENST00000582594 APOMO95445 188 aa7.34□□□□□ -1.23
PPP4R1-222ENST00000582594 CLEC3BP05452 202 aa7.34□□□□□ -1.23
PPP4R1-222ENST00000582594 TAL2Q16559 108 aa7.34□□□□□ -1.23
PPP4R1-222ENST00000582594 C15orf32Q32M92 178 aa7.34□□□□□ -1.23
PPP4R1-222ENST00000582594 MORN3Q6PF18 240 aaPredicted RBP7.34□□□□□ -1.23
PPP4R1-222ENST00000582594 SCGB3A1Q96QR1 104 aa7.34□□□□□ -1.23
PPP4R1-222ENST00000582594 F8VRH5 84 aa7.34□□□□□ -1.23
PPP4R1-222ENST00000582594 H7C1H1 209 aa7.34□□□□□ -1.23
PPP4R1-222ENST00000582594 HLA-DRB4P13762 266 aa7.34□□□□□ -1.23
PPP4R1-222ENST00000582594 PLNP26678 52 aa7.34□□□□□ -1.23
PPP4R1-222ENST00000582594 TMEM78Q5T7P6 136 aa7.34□□□□□ -1.23
PPP4R1-222ENST00000582594 ZNF502Q8TBZ5 544 aa7.34□□□□□ -1.23
PPP4R1-222ENST00000582594 MRPL16Q9NX20 251 aaKnown RBP7.34□□□□□ -1.23
PPP4R1-222ENST00000582594 HLA-DRB4X5D2U9 266 aa7.34□□□□□ -1.23
PPP4R1-222ENST00000582594 LOC107984156A0A0G2JMH3 177 aa7.33□□□□□ -1.24
PPP4R1-222ENST00000582594 M0R381 172 aa7.33□□□□□ -1.24
PPP4R1-222ENST00000582594 BUB3O43684 328 aa7.33□□□□□ -1.24
PPP4R1-222ENST00000582594 IGF1P05019 195 aa7.33□□□□□ -1.24
PPP4R1-222ENST00000582594 LGALS1P09382 135 aaKnown RBP7.33□□□□□ -1.24
PPP4R1-222ENST00000582594 PSMB2P49721 201 aa7.33□□□□□ -1.24
PPP4R1-222ENST00000582594 ARL17AQ8IVW1 177 aa7.33□□□□□ -1.24
PPP4R1-222ENST00000582594 ZNF418Q8TF45 676 aaPredicted RBP7.33□□□□□ -1.24
PPP4R1-222ENST00000582594 PLEKHB2Q96CS7 222 aa7.33□□□□□ -1.24
PPP4R1-222ENST00000582594 RPL39LQ96EH5 51 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms