RNA–Protein interactions for RNA: ENST00000578105.1

SKA2-203, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-203ENST00000578105 Q8TAT8 98 aa6.3□□□□□ -1.4
SKA2-203ENST00000578105 DPF1Q92782 380 aa6.3□□□□□ -1.4
SKA2-203ENST00000578105 ST20Q9HBF5 79 aa6.3□□□□□ -1.4
SKA2-203ENST00000578105 NXT2Q9NPJ8 142 aaKnown RBP6.3□□□□□ -1.4
SKA2-203ENST00000578105 SMPXQ9UHP9 88 aa6.3□□□□□ -1.4
SKA2-203ENST00000578105 CACNA1BQ00975 2339 aa6.3□□□□□ -1.4
SKA2-203ENST00000578105 HSBP1L1C9JCN9 74 aa6.29□□□□□ -1.4
SKA2-203ENST00000578105 K7EMI3 77 aa6.29□□□□□ -1.4
SKA2-203ENST00000578105 TCF21O43680 179 aa6.29□□□□□ -1.4
SKA2-203ENST00000578105 PPP1R17O96001 155 aa6.29□□□□□ -1.4
SKA2-203ENST00000578105 TGFAP01135 160 aa6.29□□□□□ -1.4
SKA2-203ENST00000578105 RNF224P0DH78 156 aa6.29□□□□□ -1.4
SKA2-203ENST00000578105 HLA-DMBP28068 263 aa6.29□□□□□ -1.4
SKA2-203ENST00000578105 CKS2P33552 79 aa6.29□□□□□ -1.4
SKA2-203ENST00000578105 SSTP61278 116 aa6.29□□□□□ -1.4
SKA2-203ENST00000578105 BLCAPP62952 87 aa6.29□□□□□ -1.4
SKA2-203ENST00000578105 DEFB112Q30KQ8 113 aa6.29□□□□□ -1.4
SKA2-203ENST00000578105 MRPL51Q4U2R6 128 aaKnown RBP6.29□□□□□ -1.4
SKA2-203ENST00000578105 EBLN2Q6P2I7 272 aa6.29□□□□□ -1.4
SKA2-203ENST00000578105 ZNF705AQ6ZN79 300 aaPredicted RBP6.29□□□□□ -1.4
SKA2-203ENST00000578105 MYOZ3Q8TDC0 251 aa6.29□□□□□ -1.4
SKA2-203ENST00000578105 WFDC12Q8WWY7 111 aa6.29□□□□□ -1.4
SKA2-203ENST00000578105 FAM19A4Q96LR4 140 aa6.29□□□□□ -1.4
SKA2-203ENST00000578105 TPPP3Q9BW30 176 aa6.29□□□□□ -1.4
SKA2-203ENST00000578105 RHPN1-AS1Q9BWJ2 59 aa6.29□□□□□ -1.4
SKA2-203ENST00000578105 MAP1LC3AQ9H492 121 aa6.29□□□□□ -1.4
SKA2-203ENST00000578105 MRPS16Q9Y3D3 137 aaKnown RBP6.29□□□□□ -1.4
SKA2-203ENST00000578105 PAM16Q9Y3D7 125 aa6.29□□□□□ -1.4
SKA2-203ENST00000578105 ABCA2Q9BZC7 2435 aa6.29□□□□□ -1.4
SKA2-203ENST00000578105 ITPR1Q14643 2758 aa6.29□□□□□ -1.4
SKA2-203ENST00000578105 LINC01549A6NIU2 74 aa6.28□□□□□ -1.4
SKA2-203ENST00000578105 PRAC2D3DTV9 90 aa6.28□□□□□ -1.4
SKA2-203ENST00000578105 D6R8Y8 96 aa6.28□□□□□ -1.4
SKA2-203ENST00000578105 HBDP02042 147 aa6.28□□□□□ -1.4
SKA2-203ENST00000578105 IGLC3P0DOY3 106 aa6.28□□□□□ -1.4
SKA2-203ENST00000578105 IGHV4-31P0DP07 118 aa6.28□□□□□ -1.4
SKA2-203ENST00000578105 ERCC8Q13216 396 aa6.28□□□□□ -1.4
SKA2-203ENST00000578105 UNQ9165/PRO28630Q6UXU0 137 aa6.28□□□□□ -1.4
SKA2-203ENST00000578105 Q8N2B8 174 aa6.28□□□□□ -1.4
SKA2-203ENST00000578105 RNF182Q8N6D2 247 aa6.28□□□□□ -1.4
SKA2-203ENST00000578105 OR8A1Q8NGG7 326 aa6.28□□□□□ -1.4
SKA2-203ENST00000578105 MRAP2Q96G30 205 aa6.28□□□□□ -1.4
SKA2-203ENST00000578105 UBE2E2Q96LR5 201 aa6.28□□□□□ -1.4
SKA2-203ENST00000578105 PMCHL2Q9BQD1 86 aa6.28□□□□□ -1.4
SKA2-203ENST00000578105 ZMAT5Q9UDW3 170 aaKnown RBP6.28□□□□□ -1.4
SKA2-203ENST00000578105 LINC00527Q9UJ94 153 aa6.28□□□□□ -1.4
SKA2-203ENST00000578105 IGHV3OR16-8A0A075B7F1 116 aa6.27□□□□□ -1.41
SKA2-203ENST00000578105 TMSB15BA0A087X1C1 80 aa6.27□□□□□ -1.41
SKA2-203ENST00000578105 TRAV2A0A0B4J234 112 aa6.27□□□□□ -1.41
SKA2-203ENST00000578105 IGKV3D-20A0A0C4DH25 116 aa6.27□□□□□ -1.41
SKA2-203ENST00000578105 IGHV3-66A0A0C4DH42 116 aa6.27□□□□□ -1.41
SKA2-203ENST00000578105 TMEM213A2RRL7 107 aa6.27□□□□□ -1.41
SKA2-203ENST00000578105 OR4C46A6NHA9 309 aa6.27□□□□□ -1.41
SKA2-203ENST00000578105 SMAD7O15105 426 aaKnown RBP6.27□□□□□ -1.41
SKA2-203ENST00000578105 LGALS1P09382 135 aaKnown RBP6.27□□□□□ -1.41
SKA2-203ENST00000578105 CD33P20138 364 aa6.27□□□□□ -1.41
SKA2-203ENST00000578105 LGALS9BQ3B8N2 356 aa6.27□□□□□ -1.41
SKA2-203ENST00000578105 LINC01545Q5VT33 79 aa6.27□□□□□ -1.41
SKA2-203ENST00000578105 IGFL4Q6B9Z1 124 aa6.27□□□□□ -1.41
SKA2-203ENST00000578105 LGALS9CQ6DKI2 356 aa6.27□□□□□ -1.41
SKA2-203ENST00000578105 AMN1Q8IY45 258 aa6.27□□□□□ -1.41
SKA2-203ENST00000578105 ZNF747Q9BV97 191 aa6.27□□□□□ -1.41
SKA2-203ENST00000578105 KLK15Q9H2R5 256 aa6.27□□□□□ -1.41
SKA2-203ENST00000578105 SIGLEC8Q9NYZ4 499 aa6.27□□□□□ -1.41
SKA2-203ENST00000578105 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.26□□□□□ -1.416e-8■■■□□ 16
SKA2-203ENST00000578105 LRBAP50851 2863 aa6.26□□□□□ -1.41
SKA2-203ENST00000578105 ZZEF1O43149 2961 aa6.26□□□□□ -1.41
SKA2-203ENST00000578105 M0QZ24 198 aa6.26□□□□□ -1.41
SKA2-203ENST00000578105 M0R381 172 aa6.26□□□□□ -1.41
SKA2-203ENST00000578105 ZNF207O43670 478 aaKnown RBP6.26□□□□□ -1.41
SKA2-203ENST00000578105 TRBV12-3P01733 135 aa6.26□□□□□ -1.41
SKA2-203ENST00000578105 IGHV4-59P01825 116 aa6.26□□□□□ -1.41
SKA2-203ENST00000578105 G0S2P27469 103 aa6.26□□□□□ -1.41
SKA2-203ENST00000578105 LEPP41159 167 aa6.26□□□□□ -1.41
SKA2-203ENST00000578105 ASIPP42127 132 aa6.26□□□□□ -1.41
SKA2-203ENST00000578105 HNRNPA3P51991 378 aaKnown RBP6.26□□□□□ -1.41
SKA2-203ENST00000578105 SNRPD3P62318 126 aaKnown RBP6.26□□□□□ -1.41
SKA2-203ENST00000578105 SRSF1Q07955 248 aaKnown RBP eCLIP6.26□□□□□ -1.41
SKA2-203ENST00000578105 Q5PR19 223 aa6.26□□□□□ -1.41
SKA2-203ENST00000578105 SPANXN1Q5VSR9 72 aa6.26□□□□□ -1.41
SKA2-203ENST00000578105 Q71RC1 249 aaPredicted RBP6.26□□□□□ -1.41
SKA2-203ENST00000578105 ZNF575Q86XF7 245 aa6.26□□□□□ -1.41
SKA2-203ENST00000578105 ZFAND2AQ8N6M9 145 aa6.26□□□□□ -1.41
SKA2-203ENST00000578105 RNF185Q96GF1 192 aa6.26□□□□□ -1.41
SKA2-203ENST00000578105 BBC3Q96PG8 261 aaPredicted RBP6.26□□□□□ -1.41
SKA2-203ENST00000578105 SMG1Q96Q15 3661 aaKnown RBP6.26□□□□□ -1.41
SKA2-203ENST00000578105 IGHV3OR16-13A0A075B7E8 117 aa6.25□□□□□ -1.41
SKA2-203ENST00000578105 IGHV3-74A0A0B4J1X5 117 aa6.25□□□□□ -1.41
SKA2-203ENST00000578105 DUSP14O95147 198 aaKnown RBP6.25□□□□□ -1.41
SKA2-203ENST00000578105 IGHV3-11P01762 117 aa6.25□□□□□ -1.41
SKA2-203ENST00000578105 CSN3P07498 182 aa6.25□□□□□ -1.41
SKA2-203ENST00000578105 TSPOP30536 169 aa6.25□□□□□ -1.41
SKA2-203ENST00000578105 IFI27P40305 119 aaPredicted RBP6.25□□□□□ -1.41
SKA2-203ENST00000578105 NUTF2P61970 127 aaKnown RBP6.25□□□□□ -1.41
SKA2-203ENST00000578105 SCGB2A2Q13296 93 aa6.25□□□□□ -1.41
SKA2-203ENST00000578105 TM4SF20Q53R12 229 aa6.25□□□□□ -1.41
SKA2-203ENST00000578105 Q8N8P6 123 aa6.25□□□□□ -1.41
SKA2-203ENST00000578105 OR1N2Q8NGR9 330 aa6.25□□□□□ -1.41
SKA2-203ENST00000578105 SNHG12Q9BXW3 62 aa6.25□□□□□ -1.41
SKA2-203ENST00000578105 PRRC2AP48634 2157 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms