RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 Q6ZSV7 163 aa20.93■□□□□ 0.94
LIMD2-203ENST00000578067 IQCJQ1A5X6 159 aa20.92■□□□□ 0.94
LIMD2-203ENST00000578067 FER1L6-AS1Q8NA97 138 aa20.92■□□□□ 0.94
LIMD2-203ENST00000578067 FLNAP21333 2647 aaKnown RBP20.92■□□□□ 0.94
LIMD2-203ENST00000578067 LOC102724200A0A096LPH7 203 aaPredicted RBP20.92■□□□□ 0.94
LIMD2-203ENST00000578067 IGLC6P0CF74 106 aa20.92■□□□□ 0.94
LIMD2-203ENST00000578067 CDPF1Q6NVV7 123 aa20.92■□□□□ 0.94
LIMD2-203ENST00000578067 CTRLP40313 264 aa20.91■□□□□ 0.94
LIMD2-203ENST00000578067 ID1P41134 155 aa20.91■□□□□ 0.94
LIMD2-203ENST00000578067 DCANP1Q8TF63 244 aa20.91■□□□□ 0.94
LIMD2-203ENST00000578067 KCNS1Q96KK3 526 aa20.91■□□□□ 0.94
LIMD2-203ENST00000578067 SAMD10Q9BYL1 202 aa20.9■□□□□ 0.94
LIMD2-203ENST00000578067 ESM1Q9NQ30 184 aa20.9■□□□□ 0.94
LIMD2-203ENST00000578067 OR8A1Q8NGG7 326 aa20.9■□□□□ 0.94
LIMD2-203ENST00000578067 UNC79Q9P2D8 2635 aa20.89■□□□□ 0.94
LIMD2-203ENST00000578067 C18orf65Q6ZTR6 163 aa20.89■□□□□ 0.93
LIMD2-203ENST00000578067 DEFB1P60022 68 aa20.88■□□□□ 0.93
LIMD2-203ENST00000578067 ZNF493Q6ZR52 646 aa20.88■□□□□ 0.93
LIMD2-203ENST00000578067 TCTEX1D4Q5JR98 221 aa20.88■□□□□ 0.93
LIMD2-203ENST00000578067 C11orf21Q9P2W6 132 aa20.88■□□□□ 0.93
LIMD2-203ENST00000578067 IGKV3D-20A0A0C4DH25 116 aa20.87■□□□□ 0.93
LIMD2-203ENST00000578067 GPX1P07203 203 aa20.87■□□□□ 0.93
LIMD2-203ENST00000578067 WFDC3Q8IUB2 231 aa20.87■□□□□ 0.93
LIMD2-203ENST00000578067 MS4A6AQ9H2W1 248 aa20.87■□□□□ 0.93
LIMD2-203ENST00000578067 TLN2Q9Y4G6 2542 aa20.87■□□□□ 0.93
LIMD2-203ENST00000578067 S100A12P80511 92 aa20.87■□□□□ 0.93
LIMD2-203ENST00000578067 C4orf3Q8WVX3 66 aa20.87■□□□□ 0.93
LIMD2-203ENST00000578067 C2orf70A6NJV1 201 aa20.86■□□□□ 0.93
LIMD2-203ENST00000578067 F6UB75 175 aa20.86■□□□□ 0.93
LIMD2-203ENST00000578067 GSN-AS1Q9NRJ2 163 aa20.86■□□□□ 0.93
LIMD2-203ENST00000578067 SSTP61278 116 aa20.85■□□□□ 0.93
LIMD2-203ENST00000578067 DEFB136Q30KP8 78 aa20.85■□□□□ 0.93
LIMD2-203ENST00000578067 ZFAND2AQ8N6M9 145 aa20.85■□□□□ 0.93
LIMD2-203ENST00000578067 ITPR2Q14571 2701 aa20.85■□□□□ 0.93
LIMD2-203ENST00000578067 SCGB2A2Q13296 93 aa20.85■□□□□ 0.93
LIMD2-203ENST00000578067 PRR9Q5T870 116 aa20.85■□□□□ 0.93
LIMD2-203ENST00000578067 FAM19A4Q96LR4 140 aa20.85■□□□□ 0.93
LIMD2-203ENST00000578067 MUC21A0A0G2JKD1 596 aa20.84■□□□□ 0.93
LIMD2-203ENST00000578067 MUC21A0A140T8X8 626 aa20.84■□□□□ 0.93
LIMD2-203ENST00000578067 LINC01619G3V211 115 aa20.84■□□□□ 0.93
LIMD2-203ENST00000578067 ZNF324O75467 553 aaPredicted RBP20.84■□□□□ 0.93
LIMD2-203ENST00000578067 SLURP1P55000 103 aa20.84■□□□□ 0.93
LIMD2-203ENST00000578067 MUC21Q5SSG8 566 aa20.84■□□□□ 0.93
LIMD2-203ENST00000578067 AMTP48728 403 aa20.83■□□□□ 0.93
LIMD2-203ENST00000578067 Q6ZWC4 215 aa20.83■□□□□ 0.93
LIMD2-203ENST00000578067 CNFNQ9BYD5 112 aa20.83■□□□□ 0.93
LIMD2-203ENST00000578067 TRBV7-9A0A0J9YWB2 115 aa20.83■□□□□ 0.92
LIMD2-203ENST00000578067 KHDC1LQ5JSQ8 128 aa20.83■□□□□ 0.92
LIMD2-203ENST00000578067 M0QZ24 198 aa20.82■□□□□ 0.92
LIMD2-203ENST00000578067 PMCHP20382 165 aa20.82■□□□□ 0.92
LIMD2-203ENST00000578067 NTF3P20783 257 aa20.82■□□□□ 0.92
LIMD2-203ENST00000578067 TFPI2P48307 235 aa20.82■□□□□ 0.92
LIMD2-203ENST00000578067 TWIST1Q15672 202 aa20.82■□□□□ 0.92
LIMD2-203ENST00000578067 OR11H1Q8NG94 326 aa20.82■□□□□ 0.92
LIMD2-203ENST00000578067 DPF1Q92782 380 aa20.82■□□□□ 0.92
LIMD2-203ENST00000578067 GCN1Q92616 2671 aaKnown RBP20.81■□□□□ 0.92
LIMD2-203ENST00000578067 SONP18583 2426 aaKnown RBP20.81■□□□□ 0.92
LIMD2-203ENST00000578067 K7EQG2 157 aa20.81■□□□□ 0.92
LIMD2-203ENST00000578067 Q6ZQT7 251 aa20.81■□□□□ 0.92
LIMD2-203ENST00000578067 NIT1Q86X76 327 aa20.81■□□□□ 0.92
LIMD2-203ENST00000578067 OR1N2Q8NGR9 330 aa20.81■□□□□ 0.92
LIMD2-203ENST00000578067 TMEM160Q9NX00 188 aa20.8■□□□□ 0.92
LIMD2-203ENST00000578067 J3KRW8 73 aa20.8■□□□□ 0.92
LIMD2-203ENST00000578067 FAM104BQ5XKR9 115 aa20.8■□□□□ 0.92
LIMD2-203ENST00000578067 RNASEKQ6P5S7 137 aaKnown RBP20.8■□□□□ 0.92
LIMD2-203ENST00000578067 TRAV21A0A0B4J279 112 aa20.79■□□□□ 0.92
LIMD2-203ENST00000578067 HSBP1O75506 76 aa20.79■□□□□ 0.92
LIMD2-203ENST00000578067 RNASE1P07998 156 aaKnown RBP20.79■□□□□ 0.92
LIMD2-203ENST00000578067 SNRPD3P62318 126 aaKnown RBP20.79■□□□□ 0.92
LIMD2-203ENST00000578067 APRG1Q8IVJ8 170 aa20.79■□□□□ 0.92
LIMD2-203ENST00000578067 KLHL30-AS1Q8NEE0 82 aa20.79■□□□□ 0.92
LIMD2-203ENST00000578067 ZNF688P0C7X2 276 aa20.78■□□□□ 0.92
LIMD2-203ENST00000578067 ADAMTSL5Q6ZMM2 481 aa20.78■□□□□ 0.92
LIMD2-203ENST00000578067 FAM19A2Q8N3H0 131 aa20.78■□□□□ 0.92
LIMD2-203ENST00000578067 SCGB1D1O95968 90 aa20.78■□□□□ 0.92
LIMD2-203ENST00000578067 WFDC12Q8WWY7 111 aa20.78■□□□□ 0.92
LIMD2-203ENST00000578067 URB1-AS1Q96HZ7 61 aa20.78■□□□□ 0.92
LIMD2-203ENST00000578067 PSMG4Q5JS54 123 aa20.77■□□□□ 0.92
LIMD2-203ENST00000578067 AMN1Q8IY45 258 aa20.77■□□□□ 0.92
LIMD2-203ENST00000578067 DUX3Q96PT4 197 aa20.77■□□□□ 0.91
LIMD2-203ENST00000578067 PEMTQ9UBM1 199 aa20.77■□□□□ 0.91
LIMD2-203ENST00000578067 CD33P20138 364 aa20.76■□□□□ 0.91
LIMD2-203ENST00000578067 RNASE4P34096 147 aaKnown RBP20.76■□□□□ 0.91
LIMD2-203ENST00000578067 TMEM191AQ9H0A3 160 aa20.76■□□□□ 0.91
LIMD2-203ENST00000578067 MSRB1Q9NZV6 116 aa20.76■□□□□ 0.91
LIMD2-203ENST00000578067 CHCHD1Q96BP2 118 aaKnown RBP20.75■□□□□ 0.91
LIMD2-203ENST00000578067 NAGKQ9UJ70 344 aa20.75■□□□□ 0.91
LIMD2-203ENST00000578067 OR9G4Q8NGQ1 327 aa20.75■□□□□ 0.91
LIMD2-203ENST00000578067 ZNF418Q8TF45 676 aaPredicted RBP20.75■□□□□ 0.91
LIMD2-203ENST00000578067 U3KQK5 164 aa20.75■□□□□ 0.91
LIMD2-203ENST00000578067 C16orf95Q9H693 158 aa20.74■□□□□ 0.91
LIMD2-203ENST00000578067 SMR3AQ99954 134 aa20.73■□□□□ 0.91
LIMD2-203ENST00000578067 AKAP9Q99996 3911 aa20.73■□□□□ 0.91
LIMD2-203ENST00000578067 OR5AL1P0C617 328 aa20.73■□□□□ 0.91
LIMD2-203ENST00000578067 LINC00614P0C842 121 aa20.73■□□□□ 0.91
LIMD2-203ENST00000578067 MRPL51Q4U2R6 128 aaKnown RBP20.73■□□□□ 0.91
LIMD2-203ENST00000578067 DMRTA1Q5VZB9 504 aa20.73■□□□□ 0.91
LIMD2-203ENST00000578067 D6R8Y8 96 aa20.72■□□□□ 0.91
LIMD2-203ENST00000578067 M0R2Z0 102 aa20.72■□□□□ 0.91
LIMD2-203ENST00000578067 SNAI2O43623 268 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms