RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 EMP1P54849 157 aa11.34□□□□□ -0.59
SCARF1-209ENST00000576012 TEX36Q5VZQ5 186 aa11.34□□□□□ -0.59
SCARF1-209ENST00000576012 H3BRN7 92 aa11.34□□□□□ -0.59
SCARF1-209ENST00000576012 K7EM74 188 aa11.34□□□□□ -0.59
SCARF1-209ENST00000576012 ARL3P36405 182 aa11.34□□□□□ -0.59
SCARF1-209ENST00000576012 ATP5J2P56134 94 aa11.34□□□□□ -0.59
SCARF1-209ENST00000576012 Q6AWC8 147 aa11.34□□□□□ -0.59
SCARF1-209ENST00000576012 SYT8Q8NBV8 401 aa11.34□□□□□ -0.59
SCARF1-209ENST00000576012 TMEM14CQ9P0S9 112 aa11.34□□□□□ -0.59
SCARF1-209ENST00000576012 LINC01548A6NM66 108 aa11.34□□□□□ -0.59
SCARF1-209ENST00000576012 PRAC2D3DTV9 90 aa11.34□□□□□ -0.59
SCARF1-209ENST00000576012 APOMO95445 188 aa11.34□□□□□ -0.59
SCARF1-209ENST00000576012 TTC9CQ8N5M4 171 aa11.33□□□□□ -0.6
SCARF1-209ENST00000576012 RNF185Q96GF1 192 aa11.33□□□□□ -0.6
SCARF1-209ENST00000576012 ONECUT1Q9UBC0 465 aa11.33□□□□□ -0.6
SCARF1-209ENST00000576012 NCBP2LA6PVI3 153 aaKnown RBP11.33□□□□□ -0.6
SCARF1-209ENST00000576012 LY6HO94772 140 aa11.33□□□□□ -0.6
SCARF1-209ENST00000576012 C3orf36Q3SXR2 165 aa11.33□□□□□ -0.6
SCARF1-209ENST00000576012 GFRALQ6UXV0 394 aa11.33□□□□□ -0.6
SCARF1-209ENST00000576012 H3BVH4 76 aa11.33□□□□□ -0.6
SCARF1-209ENST00000576012 TIMM23O14925 209 aa11.33□□□□□ -0.6
SCARF1-209ENST00000576012 PSMB2P49721 201 aa11.33□□□□□ -0.6
SCARF1-209ENST00000576012 PAX8Q06710 450 aa11.33□□□□□ -0.6
SCARF1-209ENST00000576012 DTX2Q86UW9 622 aa11.33□□□□□ -0.6
SCARF1-209ENST00000576012 MYOZ3Q8TDC0 251 aa11.33□□□□□ -0.6
SCARF1-209ENST00000576012 U3KQK5 164 aa11.33□□□□□ -0.6
SCARF1-209ENST00000576012 SPG11Q96JI7 2443 aa11.32□□□□□ -0.6
SCARF1-209ENST00000576012 E9PLD3 99 aa11.32□□□□□ -0.6
SCARF1-209ENST00000576012 HOXB4P17483 251 aaPredicted RBP11.32□□□□□ -0.6
SCARF1-209ENST00000576012 MRPL16Q9NX20 251 aaKnown RBP11.32□□□□□ -0.6
SCARF1-209ENST00000576012 GEMIN7Q9H840 131 aaKnown RBP11.32□□□□□ -0.6
SCARF1-209ENST00000576012 ANXA2RQ3ZCQ2 193 aa11.31□□□□□ -0.6
SCARF1-209ENST00000576012 SS18L2Q9UHA2 77 aa11.31□□□□□ -0.6
SCARF1-209ENST00000576012 TRBV7-9A0A0J9YWB2 115 aa11.31□□□□□ -0.6
SCARF1-209ENST00000576012 F8W1H4 67 aa11.31□□□□□ -0.6
SCARF1-209ENST00000576012 IL17RELQ6ZVW7 336 aa11.31□□□□□ -0.6
SCARF1-209ENST00000576012 VKORC1Q9BQB6 163 aa11.31□□□□□ -0.6
SCARF1-209ENST00000576012 TMEM155Q4W5P6 130 aa11.3□□□□□ -0.6
SCARF1-209ENST00000576012 SCGB1D4Q6XE38 83 aa11.3□□□□□ -0.6
SCARF1-209ENST00000576012 ZFP2Q6ZN57 461 aa11.3□□□□□ -0.6
SCARF1-209ENST00000576012 DYNAPQ8N1N2 210 aa11.3□□□□□ -0.6
SCARF1-209ENST00000576012 COL27A1Q8IZC6 1860 aaPredicted RBP11.3□□□□□ -0.6
SCARF1-209ENST00000576012 MT-ATP8P03928 68 aa11.3□□□□□ -0.6
SCARF1-209ENST00000576012 SPINK8P0C7L1 97 aa11.3□□□□□ -0.6
SCARF1-209ENST00000576012 HLA-DRB4P13762 266 aa11.3□□□□□ -0.6
SCARF1-209ENST00000576012 TCF15Q12870 199 aa11.3□□□□□ -0.6
SCARF1-209ENST00000576012 KLRD1Q13241 179 aa11.3□□□□□ -0.6
SCARF1-209ENST00000576012 HLA-DRB4X5D2U9 266 aa11.3□□□□□ -0.6
SCARF1-209ENST00000576012 BUB1B-PAK6H3BSN5 160 aa11.29□□□□□ -0.6
SCARF1-209ENST00000576012 GATA3P23771 443 aa11.29□□□□□ -0.6
SCARF1-209ENST00000576012 SRSF9Q13242 221 aaKnown RBP eCLIP11.29□□□□□ -0.6
SCARF1-209ENST00000576012 CFHR4Q92496 578 aa11.29□□□□□ -0.6
SCARF1-209ENST00000576012 TNFRSF18Q9Y5U5 241 aa11.29□□□□□ -0.6
SCARF1-209ENST00000576012 ZNF502Q8TBZ5 544 aa11.29□□□□□ -0.6
SCARF1-209ENST00000576012 MBD3L4A6NDZ8 208 aaPredicted RBP11.29□□□□□ -0.6
SCARF1-209ENST00000576012 MBD3L3A6NE82 208 aaPredicted RBP11.29□□□□□ -0.6
SCARF1-209ENST00000576012 LINC01549A6NIU2 74 aa11.29□□□□□ -0.6
SCARF1-209ENST00000576012 MBD3L5A6NJ08 208 aaPredicted RBP11.29□□□□□ -0.6
SCARF1-209ENST00000576012 MBD3L2Q8NHZ7 208 aaPredicted RBP11.29□□□□□ -0.6
SCARF1-209ENST00000576012 KLHL30-AS1Q8NEE0 82 aa11.28□□□□□ -0.6
SCARF1-209ENST00000576012 SCGB1A1P11684 91 aa11.28□□□□□ -0.6
SCARF1-209ENST00000576012 TMEM30BQ3MIR4 351 aa11.28□□□□□ -0.6
SCARF1-209ENST00000576012 FAM110AQ9BQ89 295 aa11.28□□□□□ -0.6
SCARF1-209ENST00000576012 PTPRQQ9UMZ3 2332 aa11.27□□□□□ -0.6
SCARF1-209ENST00000576012 MRPS12O15235 138 aaKnown RBP11.27□□□□□ -0.6
SCARF1-209ENST00000576012 RRN3P1Q2M238 152 aa11.27□□□□□ -0.6
SCARF1-209ENST00000576012 SPANXN1Q5VSR9 72 aa11.27□□□□□ -0.6
SCARF1-209ENST00000576012 TM2D2Q9BX73 214 aa11.27□□□□□ -0.6
SCARF1-209ENST00000576012 ANKHD1Q8IWZ3 2542 aaKnown RBP11.27□□□□□ -0.6
SCARF1-209ENST00000576012 OR11H12B2RN74 326 aa11.27□□□□□ -0.61
SCARF1-209ENST00000576012 H7C2G1 150 aa11.27□□□□□ -0.61
SCARF1-209ENST00000576012 CRYGBP07316 175 aa11.27□□□□□ -0.61
SCARF1-209ENST00000576012 OR11H1Q8NG94 326 aa11.27□□□□□ -0.61
SCARF1-209ENST00000576012 OR11H2Q8NH07 326 aa11.27□□□□□ -0.61
SCARF1-209ENST00000576012 NXT2Q9NPJ8 142 aaKnown RBP11.27□□□□□ -0.61
SCARF1-209ENST00000576012 FABP5P3A8MUU1 101 aa11.27□□□□□ -0.61
SCARF1-209ENST00000576012 M0R381 172 aa11.27□□□□□ -0.61
SCARF1-209ENST00000576012 DLX6P56179 175 aa11.27□□□□□ -0.61
SCARF1-209ENST00000576012 YAE1D1Q9NRH1 226 aa11.27□□□□□ -0.61
SCARF1-209ENST00000576012 HOXA3O43365 443 aaPredicted RBP11.26□□□□□ -0.61
SCARF1-209ENST00000576012 PIP4P1Q86T03 277 aa11.26□□□□□ -0.61
SCARF1-209ENST00000576012 HIGD1BQ9P298 99 aa11.26□□□□□ -0.61
SCARF1-209ENST00000576012 C11orf21Q9P2W6 132 aa11.26□□□□□ -0.61
SCARF1-209ENST00000576012 NFE4Q86UQ8 179 aa11.26□□□□□ -0.61
SCARF1-209ENST00000576012 LINC00311Q8N616 119 aa11.26□□□□□ -0.61
SCARF1-209ENST00000576012 GATD1Q8NB37 220 aa11.26□□□□□ -0.61
SCARF1-209ENST00000576012 IGKV3-7A0A075B6H7 116 aa11.26□□□□□ -0.61
SCARF1-209ENST00000576012 IGLC6P0CF74 106 aa11.26□□□□□ -0.61
SCARF1-209ENST00000576012 DEFB1P60022 68 aa11.26□□□□□ -0.61
SCARF1-209ENST00000576012 ZNF575Q86XF7 245 aa11.26□□□□□ -0.61
SCARF1-209ENST00000576012 PVRIGQ6DKI7 326 aa11.25□□□□□ -0.61
SCARF1-209ENST00000576012 SMAD5-AS1Q9Y6J3 95 aa11.25□□□□□ -0.61
SCARF1-209ENST00000576012 MFAP4P55083 255 aa11.25□□□□□ -0.61
SCARF1-209ENST00000576012 LAGE3Q14657 143 aa11.25□□□□□ -0.61
SCARF1-209ENST00000576012 LYPD1Q8N2G4 141 aa11.25□□□□□ -0.61
SCARF1-209ENST00000576012 RNASE6Q93091 150 aaKnown RBP11.25□□□□□ -0.61
SCARF1-209ENST00000576012 KIR2DL4Q99706 377 aa11.25□□□□□ -0.61
SCARF1-209ENST00000576012 C21orf62Q9NYP8 219 aa11.25□□□□□ -0.61
SCARF1-209ENST00000576012 ATP5LO75964 103 aa11.24□□□□□ -0.61
SCARF1-209ENST00000576012 IGLV1-47P01700 117 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms