RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 IGKCP01834 107 aa12.05□□□□□ -0.48
NUP88-207ENST00000573584 C11orf71Q6IPW1 123 aa12.05□□□□□ -0.48
NUP88-207ENST00000573584 FOXC2Q99958 501 aa12.05□□□□□ -0.48
NUP88-207ENST00000573584 SLC50A1Q9BRV3 221 aa12.05□□□□□ -0.48
NUP88-207ENST00000573584 MEGF9Q9H1U4 602 aa12.05□□□□□ -0.48
NUP88-207ENST00000573584 C11orf21Q9P2W6 132 aa12.05□□□□□ -0.48
NUP88-207ENST00000573584 FOXC1Q12948 553 aa12.05□□□□□ -0.48
NUP88-207ENST00000573584 Q8N8P6 123 aa12.05□□□□□ -0.48
NUP88-207ENST00000573584 HRNRQ86YZ3 2850 aaPredicted RBP12.05□□□□□ -0.48
NUP88-207ENST00000573584 A0A1W2PPM0 123 aa12.04□□□□□ -0.48
NUP88-207ENST00000573584 GCSHP23434 173 aa12.04□□□□□ -0.48
NUP88-207ENST00000573584 CLEC19AQ6UXS0 136 aa12.04□□□□□ -0.48
NUP88-207ENST00000573584 CLPSL1A2RUU4 121 aa12.04□□□□□ -0.48
NUP88-207ENST00000573584 ATP6V0E1O15342 81 aa12.04□□□□□ -0.48
NUP88-207ENST00000573584 TRGV3P03979 118 aa12.04□□□□□ -0.48
NUP88-207ENST00000573584 IGHV3-49A0A0A0MS15 119 aa12.04□□□□□ -0.48
NUP88-207ENST00000573584 TMEM78Q5T7P6 136 aa12.04□□□□□ -0.48
NUP88-207ENST00000573584 GTSCR1Q86UQ5 136 aa12.04□□□□□ -0.48
NUP88-207ENST00000573584 SPCS1Q9Y6A9 102 aa12.04□□□□□ -0.48
NUP88-207ENST00000573584 MED13LQ71F56 2210 aa12.03□□□□□ -0.48
NUP88-207ENST00000573584 SMIM13P0DJ93 91 aa12.03□□□□□ -0.48
NUP88-207ENST00000573584 SMIM17P0DL12 118 aa12.03□□□□□ -0.48
NUP88-207ENST00000573584 IGLV2-18A0A075B6J9 118 aa12.03□□□□□ -0.48
NUP88-207ENST00000573584 ATP5LO75964 103 aa12.03□□□□□ -0.48
NUP88-207ENST00000573584 DPM2O94777 84 aa12.03□□□□□ -0.48
NUP88-207ENST00000573584 ZC2HC1BQ5TFG8 222 aa12.03□□□□□ -0.48
NUP88-207ENST00000573584 HIGD1BQ9P298 99 aa12.03□□□□□ -0.48
NUP88-207ENST00000573584 SMPXQ9UHP9 88 aa12.03□□□□□ -0.48
NUP88-207ENST00000573584 TMEM8BA6NDV4 472 aa12.02□□□□□ -0.48
NUP88-207ENST00000573584 CCDC140Q96MF4 163 aa12.02□□□□□ -0.48
NUP88-207ENST00000573584 SIRPDQ9H106 197 aa12.02□□□□□ -0.48
NUP88-207ENST00000573584 G3V318 75 aa12.02□□□□□ -0.49
NUP88-207ENST00000573584 ZNF207O43670 478 aaKnown RBP12.02□□□□□ -0.49
NUP88-207ENST00000573584 FABP2P12104 132 aa12.02□□□□□ -0.49
NUP88-207ENST00000573584 FXYD2P54710 66 aa12.02□□□□□ -0.49
NUP88-207ENST00000573584 CHAC1Q9BUX1 264 aa12.02□□□□□ -0.49
NUP88-207ENST00000573584 TMEM160Q9NX00 188 aa12.02□□□□□ -0.49
NUP88-207ENST00000573584 UFC1Q9Y3C8 167 aa12.02□□□□□ -0.49
NUP88-207ENST00000573584 PTPRQQ9UMZ3 2332 aa12.02□□□□□ -0.49
NUP88-207ENST00000573584 NBASA2RRP1 2371 aa12.02□□□□□ -0.49
NUP88-207ENST00000573584 CACNA1BQ00975 2339 aa12.01□□□□□ -0.49
NUP88-207ENST00000573584 TRAV8-2A0A0B4J237 113 aa12.01□□□□□ -0.49
NUP88-207ENST00000573584 TRAV26-2A0A0B4J265 109 aa12.01□□□□□ -0.49
NUP88-207ENST00000573584 SAMD5Q5TGI4 173 aa12.01□□□□□ -0.49
NUP88-207ENST00000573584 CSTL1Q9H114 145 aa12.01□□□□□ -0.49
NUP88-207ENST00000573584 ADORA2A-AS1P86434 159 aa12.01□□□□□ -0.49
NUP88-207ENST00000573584 OR5A1Q8NGJ0 315 aa12.01□□□□□ -0.49
NUP88-207ENST00000573584 MYOZ3Q8TDC0 251 aa12.01□□□□□ -0.49
NUP88-207ENST00000573584 TRBV25-1A0A075B6N4 114 aa12□□□□□ -0.49
NUP88-207ENST00000573584 TRAV40A0A0B4J280 105 aa12□□□□□ -0.49
NUP88-207ENST00000573584 IGHV7-4-1A0A0J9YVY3 117 aa12□□□□□ -0.49
NUP88-207ENST00000573584 LINC01548A6NM66 108 aa12□□□□□ -0.49
NUP88-207ENST00000573584 C8orf86Q6ZUL3 223 aa12□□□□□ -0.49
NUP88-207ENST00000573584 METTL26Q96S19 204 aa12□□□□□ -0.49
NUP88-207ENST00000573584 LAGE3Q14657 143 aa12□□□□□ -0.49
NUP88-207ENST00000573584 Q6ZQT7 251 aa12□□□□□ -0.49
NUP88-207ENST00000573584 NRACQ8N912 160 aa12□□□□□ -0.49
NUP88-207ENST00000573584 KLK9Q2XQG4 91 aa12□□□□□ -0.49
NUP88-207ENST00000573584 SPANXN1Q5VSR9 72 aa12□□□□□ -0.49
NUP88-207ENST00000573584 EEF1AKMT3Q96AZ1 226 aa12□□□□□ -0.49
NUP88-207ENST00000573584 MRPL35Q9NZE8 188 aaKnown RBP12□□□□□ -0.49
NUP88-207ENST00000573584 KLK9Q9UKQ9 250 aa12□□□□□ -0.49
NUP88-207ENST00000573584 NBL1P41271 181 aa11.99□□□□□ -0.49
NUP88-207ENST00000573584 UBE2E1P51965 193 aa11.99□□□□□ -0.49
NUP88-207ENST00000573584 AJUBAQ96IF1 538 aa11.99□□□□□ -0.49
NUP88-207ENST00000573584 G3V4G9 280 aa11.99□□□□□ -0.49
NUP88-207ENST00000573584 SAA4P35542 130 aa11.98□□□□□ -0.49
NUP88-207ENST00000573584 NEGR1Q7Z3B1 354 aa11.98□□□□□ -0.49
NUP88-207ENST00000573584 PRSS47A8MTI9 375 aa11.98□□□□□ -0.49
NUP88-207ENST00000573584 K7ERJ3 54 aa11.98□□□□□ -0.49
NUP88-207ENST00000573584 RIPPLY3P57055 190 aa11.98□□□□□ -0.49
NUP88-207ENST00000573584 C9orf47Q6ZRZ4 202 aa11.98□□□□□ -0.49
NUP88-207ENST00000573584 MRPL53Q96EL3 112 aaKnown RBP11.98□□□□□ -0.49
NUP88-207ENST00000573584 HIF1ANQ9NWT6 349 aa11.98□□□□□ -0.49
NUP88-207ENST00000573584 MUC6Q6W4X9 2439 aa11.97□□□□□ -0.49
NUP88-207ENST00000573584 TRBV7-1A0A0A6YYK4 115 aa11.97□□□□□ -0.49
NUP88-207ENST00000573584 SRSF1Q07955 248 aaKnown RBP eCLIP11.97□□□□□ -0.49
NUP88-207ENST00000573584 NHP2Q9NX24 153 aaKnown RBP11.97□□□□□ -0.49
NUP88-207ENST00000573584 IGHV4-4A0A075B6R2 117 aa11.96□□□□□ -0.49
NUP88-207ENST00000573584 CEND1Q8N111 149 aa11.96□□□□□ -0.49
NUP88-207ENST00000573584 C16orf92Q96LL3 132 aa11.96□□□□□ -0.49
NUP88-207ENST00000573584 TM2D2Q9BX73 214 aa11.96□□□□□ -0.49
NUP88-207ENST00000573584 H3BVH4 76 aa11.96□□□□□ -0.5
NUP88-207ENST00000573584 EFNA4P52798 201 aa11.96□□□□□ -0.5
NUP88-207ENST00000573584 MAPKAPK5-AS1Q8N8E1 139 aa11.96□□□□□ -0.5
NUP88-207ENST00000573584 A0A087WX48 190 aa11.95□□□□□ -0.5
NUP88-207ENST00000573584 U3KQE9 123 aa11.95□□□□□ -0.5
NUP88-207ENST00000573584 CENPVL3A0A0U1RRI6 287 aa11.95□□□□□ -0.5
NUP88-207ENST00000573584 HLA-DRB4P13762 266 aa11.95□□□□□ -0.5
NUP88-207ENST00000573584 ATP5G2Q06055 141 aa11.95□□□□□ -0.5
NUP88-207ENST00000573584 PHLDA1Q8WV24 401 aaPredicted RBP11.95□□□□□ -0.5
NUP88-207ENST00000573584 HLA-DRB4X5D2U9 266 aa11.95□□□□□ -0.5
NUP88-207ENST00000573584 K7EMI3 77 aa11.94□□□□□ -0.5
NUP88-207ENST00000573584 A0A1W2PPR1 153 aa11.94□□□□□ -0.5
NUP88-207ENST00000573584 J3KRW8 73 aa11.94□□□□□ -0.5
NUP88-207ENST00000573584 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.93□□□□□ -0.5
NUP88-207ENST00000573584 PRR9Q5T870 116 aa11.93□□□□□ -0.5
NUP88-207ENST00000573584 PLNP26678 52 aa11.93□□□□□ -0.5
NUP88-207ENST00000573584 MRAP2Q96G30 205 aa11.93□□□□□ -0.5
NUP88-207ENST00000573584 IGF1P05019 195 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms