RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 ARL6IP6Q8N6S5 226 aa6.78□□□□□ -1.32
CIITA-207ENST00000571545 CMTM2Q8TAZ6 248 aa6.78□□□□□ -1.32
CIITA-207ENST00000571545 TMED6Q8WW62 240 aa6.78□□□□□ -1.32
CIITA-207ENST00000571545 FXYD5Q96DB9 178 aa6.78□□□□□ -1.32
CIITA-207ENST00000571545 PHYHIPLQ96FC7 376 aa6.78□□□□□ -1.32
CIITA-207ENST00000571545 ST6GAL2Q96JF0 529 aa6.78□□□□□ -1.32
CIITA-207ENST00000571545 VGLL1Q99990 258 aa6.78□□□□□ -1.32
CIITA-207ENST00000571545 GSN-AS1Q9NRJ2 163 aa6.78□□□□□ -1.32
CIITA-207ENST00000571545 ICOSQ9Y6W8 199 aa6.78□□□□□ -1.32
CIITA-207ENST00000571545 MUC4Q99102 2169 aa6.77□□□□□ -1.33
CIITA-207ENST00000571545 TRGV11A0A075B6L2 103 aa6.77□□□□□ -1.33
CIITA-207ENST00000571545 A0A1W2PPV4 95 aa6.77□□□□□ -1.33
CIITA-207ENST00000571545 A6NHS1 94 aa6.77□□□□□ -1.33
CIITA-207ENST00000571545 H0YIZ8 118 aa6.77□□□□□ -1.33
CIITA-207ENST00000571545 HOXA5P20719 270 aa6.77□□□□□ -1.33
CIITA-207ENST00000571545 ZNF266Q14584 549 aa6.77□□□□□ -1.33
CIITA-207ENST00000571545 KLF12Q9Y4X4 402 aa6.77□□□□□ -1.33
CIITA-207ENST00000571545 VPS13DQ5THJ4 4388 aa6.77□□□□□ -1.33
CIITA-207ENST00000571545 SERTM2A0A1B0GWG4 89 aa6.76□□□□□ -1.33
CIITA-207ENST00000571545 RANP62826 216 aaKnown RBP6.76□□□□□ -1.33
CIITA-207ENST00000571545 Q6AWC8 147 aa6.76□□□□□ -1.33
CIITA-207ENST00000571545 FAM159AQ6UWV7 190 aa6.76□□□□□ -1.33
CIITA-207ENST00000571545 SPXQ9BT56 116 aa6.76□□□□□ -1.33
CIITA-207ENST00000571545 BATF3Q9NR55 127 aa6.76□□□□□ -1.33
CIITA-207ENST00000571545 OTORQ9NRC9 128 aa6.76□□□□□ -1.33
CIITA-207ENST00000571545 MBD2Q9UBB5 411 aa6.76□□□□□ -1.33
CIITA-207ENST00000571545 PRO0255Q9UI72 69 aa6.76□□□□□ -1.33
CIITA-207ENST00000571545 A0A096LPF7 62 aa6.75□□□□□ -1.33
CIITA-207ENST00000571545 C16orf90A8MZG2 172 aa6.75□□□□□ -1.33
CIITA-207ENST00000571545 DIRC3C9JPN6 131 aa6.75□□□□□ -1.33
CIITA-207ENST00000571545 K7EP13 123 aa6.75□□□□□ -1.33
CIITA-207ENST00000571545 PAX4O43316 350 aa6.75□□□□□ -1.33
CIITA-207ENST00000571545 IFITM3Q01628 133 aa6.75□□□□□ -1.33
CIITA-207ENST00000571545 MRPL23Q16540 153 aaKnown RBP6.75□□□□□ -1.33
CIITA-207ENST00000571545 Q8TAT8 98 aa6.75□□□□□ -1.33
CIITA-207ENST00000571545 PCNPQ8WW12 178 aaKnown RBP6.75□□□□□ -1.33
CIITA-207ENST00000571545 ASB13Q8WXK3 278 aa6.75□□□□□ -1.33
CIITA-207ENST00000571545 K7EQM0 130 aa6.74□□□□□ -1.33
CIITA-207ENST00000571545 CDK2AP2O75956 126 aa6.74□□□□□ -1.33
CIITA-207ENST00000571545 ORM1P02763 201 aa6.74□□□□□ -1.33
CIITA-207ENST00000571545 ESRGQ1W209 222 aa6.74□□□□□ -1.33
CIITA-207ENST00000571545 NDFIP1Q9BT67 221 aa6.74□□□□□ -1.33
CIITA-207ENST00000571545 SMIM3Q9BZL3 60 aa6.74□□□□□ -1.33
CIITA-207ENST00000571545 MRPL16Q9NX20 251 aaKnown RBP6.74□□□□□ -1.33
CIITA-207ENST00000571545 TP53TG3Q9ULZ0 132 aa6.74□□□□□ -1.33
CIITA-207ENST00000571545 TRAV9-2A0A087WT02 112 aa6.73□□□□□ -1.33
CIITA-207ENST00000571545 TRAV21A0A0B4J279 112 aa6.73□□□□□ -1.33
CIITA-207ENST00000571545 TRGV4A0A0C4DH28 118 aa6.73□□□□□ -1.33
CIITA-207ENST00000571545 EREGO14944 169 aa6.73□□□□□ -1.33
CIITA-207ENST00000571545 SIVA1O15304 175 aa6.73□□□□□ -1.33
CIITA-207ENST00000571545 PTTG1O95997 202 aa6.73□□□□□ -1.33
CIITA-207ENST00000571545 MBP02144 154 aa6.73□□□□□ -1.33
CIITA-207ENST00000571545 TDRG1Q3Y452 100 aa6.73□□□□□ -1.33
CIITA-207ENST00000571545 PRR9Q5T870 116 aa6.73□□□□□ -1.33
CIITA-207ENST00000571545 SH2D6Q7Z4S9 175 aa6.73□□□□□ -1.33
CIITA-207ENST00000571545 ZNF575Q86XF7 245 aa6.73□□□□□ -1.33
CIITA-207ENST00000571545 IQCF2Q8IXL9 164 aa6.73□□□□□ -1.33
CIITA-207ENST00000571545 RASL10AQ92737 203 aa6.73□□□□□ -1.33
CIITA-207ENST00000571545 VSIG2Q96IQ7 327 aa6.73□□□□□ -1.33
CIITA-207ENST00000571545 KCNS1Q96KK3 526 aa6.73□□□□□ -1.33
CIITA-207ENST00000571545 HYLS1Q96M11 299 aa6.73□□□□□ -1.33
CIITA-207ENST00000571545 TXNDC17Q9BRA2 123 aa6.73□□□□□ -1.33
CIITA-207ENST00000571545 HHLA3Q9XRX5 114 aa6.73□□□□□ -1.33
CIITA-207ENST00000571545 DNAH10Q8IVF4 4471 aa6.72□□□□□ -1.33
CIITA-207ENST00000571545 PGPA6NDG6 321 aa6.72□□□□□ -1.33
CIITA-207ENST00000571545 FBLL1A6NHQ2 334 aaKnown RBP6.72□□□□□ -1.33
CIITA-207ENST00000571545 C9JCJ5 164 aa6.72□□□□□ -1.33
CIITA-207ENST00000571545 SRIP30626 198 aa6.72□□□□□ -1.33
CIITA-207ENST00000571545 CDC34P49427 236 aaPredicted RBP6.72□□□□□ -1.33
CIITA-207ENST00000571545 CRYBA4P53673 196 aa6.72□□□□□ -1.33
CIITA-207ENST00000571545 SERF2P84101 59 aa6.72□□□□□ -1.33
CIITA-207ENST00000571545 TMEM183BQ1AE95 376 aa6.72□□□□□ -1.33
CIITA-207ENST00000571545 ZFP69Q49AA0 526 aa6.72□□□□□ -1.33
CIITA-207ENST00000571545 MUC21Q5SSG8 566 aa6.72□□□□□ -1.33
CIITA-207ENST00000571545 NEGR1Q7Z3B1 354 aa6.72□□□□□ -1.33
CIITA-207ENST00000571545 NFE4Q86UQ8 179 aa6.72□□□□□ -1.33
CIITA-207ENST00000571545 TMEM183AQ8IXX5 376 aa6.72□□□□□ -1.33
CIITA-207ENST00000571545 OR10G4Q8NGN3 311 aa6.72□□□□□ -1.33
CIITA-207ENST00000571545 OR10G9Q8NGN4 311 aa6.72□□□□□ -1.33
CIITA-207ENST00000571545 OR10G7Q8NGN6 311 aa6.72□□□□□ -1.33
CIITA-207ENST00000571545 OR2G3Q8NGZ4 309 aa6.72□□□□□ -1.33
CIITA-207ENST00000571545 PSMG3Q9BT73 122 aaPredicted RBP6.72□□□□□ -1.33
CIITA-207ENST00000571545 SDF2L1Q9HCN8 221 aa6.72□□□□□ -1.33
CIITA-207ENST00000571545 RPH3ALQ9UNE2 315 aa6.72□□□□□ -1.33
CIITA-207ENST00000571545 TRAV4A0A0B4J268 109 aa6.71□□□□□ -1.34
CIITA-207ENST00000571545 M0R2P5 195 aa6.71□□□□□ -1.34
CIITA-207ENST00000571545 CIDEAO60543 219 aa6.71□□□□□ -1.34
CIITA-207ENST00000571545 NXPH4O95158 308 aa6.71□□□□□ -1.34
CIITA-207ENST00000571545 IGHV3-53P01767 116 aa6.71□□□□□ -1.34
CIITA-207ENST00000571545 GOLT1AQ6ZVE7 132 aa6.71□□□□□ -1.34
CIITA-207ENST00000571545 C5orf17Q8NAS9 161 aa6.71□□□□□ -1.34
CIITA-207ENST00000571545 AQP10Q96PS8 301 aa6.71□□□□□ -1.34
CIITA-207ENST00000571545 MED28Q9H204 178 aa6.71□□□□□ -1.34
CIITA-207ENST00000571545 TREM1Q9NP99 234 aa6.71□□□□□ -1.34
CIITA-207ENST00000571545 NAGKQ9UJ70 344 aa6.71□□□□□ -1.34
CIITA-207ENST00000571545 HERC2O95714 4834 aa6.71□□□□□ -1.34
CIITA-207ENST00000571545 KIAA1109Q2LD37 5005 aa6.71□□□□□ -1.34
CIITA-207ENST00000571545 ARL14EPLP0DKL9 152 aa6.7□□□□□ -1.34
CIITA-207ENST00000571545 ERVFC1-1P60608 527 aa6.7□□□□□ -1.34
CIITA-207ENST00000571545 RAB2AP61019 212 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms