RNA–Protein interactions for RNA: ENST00000570276.5

ULK3-222, Transcript of unc-51 like kinase 3, human

TSL 1 (best)

Gene ULK3, Length 2,951 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ULK3-222	ENST00000570276	TTC9C	Q8N5M4	171 aa		13.35	□□□□□ -0.27
ULK3-222	ENST00000570276	ZNF491	Q8N8L2	437 aa		13.35	□□□□□ -0.27
ULK3-222	ENST00000570276	ONECUT1	Q9UBC0	465 aa		13.35	□□□□□ -0.27
ULK3-222	ENST00000570276	SCGB2A1	O75556	95 aa		13.34	□□□□□ -0.27
ULK3-222	ENST00000570276	HBD	P02042	147 aa		13.34	□□□□□ -0.27
ULK3-222	ENST00000570276	HES1	Q14469	280 aa		13.34	□□□□□ -0.27
ULK3-222	ENST00000570276	ZFP2	Q6ZN57	461 aa		13.34	□□□□□ -0.27
ULK3-222	ENST00000570276	HIST1H4G	Q99525	98 aa		13.34	□□□□□ -0.27
ULK3-222	ENST00000570276	LOC107984156	A0A0G2JMH3	177 aa		13.34	□□□□□ -0.27
ULK3-222	ENST00000570276	IGLV1-47	P01700	117 aa		13.34	□□□□□ -0.27
ULK3-222	ENST00000570276	EVI2A	P22794	236 aa		13.34	□□□□□ -0.27
ULK3-222	ENST00000570276	PIP4P1	Q86T03	277 aa		13.34	□□□□□ -0.27
ULK3-222	ENST00000570276	ARL17A	Q8IVW1	177 aa		13.34	□□□□□ -0.27
ULK3-222	ENST00000570276	RNF125	Q96EQ8	232 aa		13.34	□□□□□ -0.27
ULK3-222	ENST00000570276	SCNM1	Q9BWG6	230 aa		13.34	□□□□□ -0.27
ULK3-222	ENST00000570276	HHLA3	Q9XRX5	114 aa		13.34	□□□□□ -0.27
ULK3-222	ENST00000570276	SPTAN1	Q13813	2472 aa	Known RBP	13.34	□□□□□ -0.27
ULK3-222	ENST00000570276	OR11H12	B2RN74	326 aa		13.33	□□□□□ -0.28
ULK3-222	ENST00000570276	CEACAM4	O75871	244 aa		13.33	□□□□□ -0.28
ULK3-222	ENST00000570276	PSMB2	P49721	201 aa		13.33	□□□□□ -0.28
ULK3-222	ENST00000570276	KLRD1	Q13241	179 aa		13.33	□□□□□ -0.28
ULK3-222	ENST00000570276	OR11H1	Q8NG94	326 aa		13.33	□□□□□ -0.28
ULK3-222	ENST00000570276	OR11H2	Q8NH07	326 aa		13.33	□□□□□ -0.28
ULK3-222	ENST00000570276	SHANK2-AS3	Q9BTD1	123 aa		13.33	□□□□□ -0.28
ULK3-222	ENST00000570276	FOXC2	Q99958	501 aa		13.33	□□□□□ -0.28
ULK3-222	ENST00000570276	TRAV40	A0A0B4J280	105 aa		13.32	□□□□□ -0.28
ULK3-222	ENST00000570276		H3BVH4	76 aa		13.32	□□□□□ -0.28
ULK3-222	ENST00000570276	CT45A10	P0DMU9	189 aa		13.32	□□□□□ -0.28
ULK3-222	ENST00000570276	RPL32	P62910	135 aa	Known RBP	13.32	□□□□□ -0.28
ULK3-222	ENST00000570276	TWIST1	Q15672	202 aa		13.32	□□□□□ -0.28
ULK3-222	ENST00000570276	HIF1AN	Q9NWT6	349 aa		13.32	□□□□□ -0.28
ULK3-222	ENST00000570276	IGHV3OR16-13	A0A075B7E8	117 aa		13.32	□□□□□ -0.28
ULK3-222	ENST00000570276	IGHV3-74	A0A0B4J1X5	117 aa		13.32	□□□□□ -0.28
ULK3-222	ENST00000570276	SH2D1A	O60880	128 aa		13.32	□□□□□ -0.28
ULK3-222	ENST00000570276	NHLRC4	P0CG21	123 aa	Predicted RBP	13.32	□□□□□ -0.28
ULK3-222	ENST00000570276	DPF1	Q92782	380 aa		13.32	□□□□□ -0.28
ULK3-222	ENST00000570276	CARD19	Q96LW7	228 aa		13.32	□□□□□ -0.28
ULK3-222	ENST00000570276	GATA1	P15976	413 aa	Predicted RBP	13.31	□□□□□ -0.28
ULK3-222	ENST00000570276	ZNF80	P51504	273 aa	Predicted RBP	13.31	□□□□□ -0.28
ULK3-222	ENST00000570276	MRPL51	Q4U2R6	128 aa	Known RBP	13.31	□□□□□ -0.28
ULK3-222	ENST00000570276	ID1	P41134	155 aa		13.31	□□□□□ -0.28
ULK3-222	ENST00000570276	LINC01560	Q8TB33	94 aa		13.31	□□□□□ -0.28
ULK3-222	ENST00000570276	ZFHX3	Q15911	3703 aa		13.31	□□□□□ -0.28
ULK3-222	ENST00000570276	RRN3P1	Q2M238	152 aa		13.3	□□□□□ -0.28
ULK3-222	ENST00000570276		Q6AWC8	147 aa		13.3	□□□□□ -0.28
ULK3-222	ENST00000570276	AJUBA	Q96IF1	538 aa		13.3	□□□□□ -0.28
ULK3-222	ENST00000570276	IGHV3-66	A0A0C4DH42	116 aa		13.3	□□□□□ -0.28
ULK3-222	ENST00000570276	TMEM8B	A6NDV4	472 aa		13.3	□□□□□ -0.28
ULK3-222	ENST00000570276	SHISA9	B4DS77	424 aa		13.3	□□□□□ -0.28
ULK3-222	ENST00000570276	EGR2	P11161	476 aa	Predicted RBP	13.3	□□□□□ -0.28
ULK3-222	ENST00000570276	CKS2	P33552	79 aa		13.3	□□□□□ -0.28
ULK3-222	ENST00000570276	PVRIG	Q6DKI7	326 aa		13.3	□□□□□ -0.28
ULK3-222	ENST00000570276	TMEM14C	Q9P0S9	112 aa		13.3	□□□□□ -0.28
ULK3-222	ENST00000570276	COL6A6	A6NMZ7	2263 aa		13.3	□□□□□ -0.28
ULK3-222	ENST00000570276		H3BRN7	92 aa		13.29	□□□□□ -0.28
ULK3-222	ENST00000570276	HOXB4	P17483	251 aa	Predicted RBP	13.29	□□□□□ -0.28
ULK3-222	ENST00000570276	GFRAL	Q6UXV0	394 aa		13.29	□□□□□ -0.28
ULK3-222	ENST00000570276	ZNF502	Q8TBZ5	544 aa		13.29	□□□□□ -0.28
ULK3-222	ENST00000570276	LEP	P41159	167 aa		13.29	□□□□□ -0.28
ULK3-222	ENST00000570276	ODF1	Q14990	250 aa		13.29	□□□□□ -0.28
ULK3-222	ENST00000570276	CELSR1	Q9NYQ6	3014 aa		13.29	□□□□□ -0.28
ULK3-222	ENST00000570276	FAM104B	Q5XKR9	115 aa		13.29	□□□□□ -0.28
ULK3-222	ENST00000570276	COL12A1	Q99715	3063 aa		13.28	□□□□□ -0.28
ULK3-222	ENST00000570276	NDUFA3	O95167	84 aa		13.28	□□□□□ -0.28
ULK3-222	ENST00000570276	PRTN3	P24158	256 aa		13.28	□□□□□ -0.28
ULK3-222	ENST00000570276	ORM1	P02763	201 aa		13.28	□□□□□ -0.28
ULK3-222	ENST00000570276	GRN	P28799	593 aa	Known RBP	13.28	□□□□□ -0.28
ULK3-222	ENST00000570276	ERCC8	Q13216	396 aa		13.28	□□□□□ -0.28
ULK3-222	ENST00000570276	C1orf122	Q6ZSJ8	110 aa		13.28	□□□□□ -0.28
ULK3-222	ENST00000570276	ASCL5	Q7RTU5	278 aa		13.28	□□□□□ -0.28
ULK3-222	ENST00000570276	ORMDL3	Q8N138	153 aa		13.28	□□□□□ -0.28
ULK3-222	ENST00000570276	NCBP2L	A6PVI3	153 aa	Known RBP	13.27	□□□□□ -0.28
ULK3-222	ENST00000570276	IGFL3	Q6UXB1	125 aa		13.27	□□□□□ -0.28
ULK3-222	ENST00000570276	AAMDC	Q9H7C9	122 aa		13.27	□□□□□ -0.28
ULK3-222	ENST00000570276	MRPS12	O15235	138 aa	Known RBP	13.27	□□□□□ -0.29
ULK3-222	ENST00000570276	CLEC3B	P05452	202 aa		13.27	□□□□□ -0.29
ULK3-222	ENST00000570276	MORN3	Q6PF18	240 aa	Predicted RBP	13.27	□□□□□ -0.29
ULK3-222	ENST00000570276	C8orf31	Q8N9H6	132 aa		13.27	□□□□□ -0.29
ULK3-222	ENST00000570276	IGHV3-49	A0A0A0MS15	119 aa		13.26	□□□□□ -0.29
ULK3-222	ENST00000570276	IGKC	P01834	107 aa		13.26	□□□□□ -0.29
ULK3-222	ENST00000570276	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	13.26	□□□□□ -0.29
ULK3-222	ENST00000570276	CFAP126	Q5VTH2	177 aa		13.26	□□□□□ -0.29
ULK3-222	ENST00000570276	ZFAND6	Q6FIF0	208 aa		13.26	□□□□□ -0.29
ULK3-222	ENST00000570276	TEX29	Q8N6K0	151 aa		13.26	□□□□□ -0.29
ULK3-222	ENST00000570276	MRPL35	Q9NZE8	188 aa	Known RBP	13.26	□□□□□ -0.29
ULK3-222	ENST00000570276	KAAG1	Q9UBP8	84 aa		13.26	□□□□□ -0.29
ULK3-222	ENST00000570276	LINC01549	A6NIU2	74 aa		13.25	□□□□□ -0.29
ULK3-222	ENST00000570276	CRLF1	O75462	422 aa		13.25	□□□□□ -0.29
ULK3-222	ENST00000570276	NDP	Q00604	133 aa		13.25	□□□□□ -0.29
ULK3-222	ENST00000570276	SPRY2	O43597	315 aa		13.25	□□□□□ -0.29
ULK3-222	ENST00000570276		Q6ZQT7	251 aa		13.25	□□□□□ -0.29
ULK3-222	ENST00000570276	RNF182	Q8N6D2	247 aa		13.25	□□□□□ -0.29
ULK3-222	ENST00000570276	VSTM5	A8MXK1	200 aa		13.24	□□□□□ -0.29
ULK3-222	ENST00000570276	PRAC2	D3DTV9	90 aa		13.24	□□□□□ -0.29
ULK3-222	ENST00000570276	HLA-DRB4	P13762	266 aa		13.24	□□□□□ -0.29
ULK3-222	ENST00000570276	PAX8	Q06710	450 aa		13.24	□□□□□ -0.29
ULK3-222	ENST00000570276	HLA-DRB4	X5D2U9	266 aa		13.24	□□□□□ -0.29
ULK3-222	ENST00000570276	FANCD2OS	Q96PS1	177 aa		13.23	□□□□□ -0.29
ULK3-222	ENST00000570276	PRR25	Q96S07	402 aa		13.23	□□□□□ -0.29
ULK3-222	ENST00000570276	HIGD1B	Q9P298	99 aa		13.23	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms