RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 SSTP61278 116 aa10.19□□□□□ -0.78
LINC00563-201ENST00000566370 TM4SF20Q53R12 229 aa10.19□□□□□ -0.78
LINC00563-201ENST00000566370 SPANXN1Q5VSR9 72 aa10.19□□□□□ -0.78
LINC00563-201ENST00000566370 Q6YL49 198 aa10.19□□□□□ -0.78
LINC00563-201ENST00000566370 ST20Q9HBF5 79 aa10.19□□□□□ -0.78
LINC00563-201ENST00000566370 SOCS3O14543 225 aa10.18□□□□□ -0.78
LINC00563-201ENST00000566370 FSHBP01225 129 aa10.18□□□□□ -0.78
LINC00563-201ENST00000566370 HBDP02042 147 aa10.18□□□□□ -0.78
LINC00563-201ENST00000566370 MED14OSP0DP75 135 aa10.18□□□□□ -0.78
LINC00563-201ENST00000566370 S100A4P26447 101 aaKnown RBP10.18□□□□□ -0.78
LINC00563-201ENST00000566370 ASIPP42127 132 aa10.18□□□□□ -0.78
LINC00563-201ENST00000566370 Q6ZN92 141 aa10.18□□□□□ -0.78
LINC00563-201ENST00000566370 OR8A1Q8NGG7 326 aa10.18□□□□□ -0.78
LINC00563-201ENST00000566370 SIGLEC8Q9NYZ4 499 aa10.18□□□□□ -0.78
LINC00563-201ENST00000566370 ACACBO00763 2458 aa10.18□□□□□ -0.78
LINC00563-201ENST00000566370 ZZEF1O43149 2961 aa10.18□□□□□ -0.78
LINC00563-201ENST00000566370 DCHS2Q6V1P9 2916 aa10.18□□□□□ -0.78
LINC00563-201ENST00000566370 LOC389332A0A1B0GUA5 103 aa10.17□□□□□ -0.78
LINC00563-201ENST00000566370 SNAI2O43623 268 aa10.17□□□□□ -0.78
LINC00563-201ENST00000566370 LGALS1P09382 135 aaKnown RBP10.17□□□□□ -0.78
LINC00563-201ENST00000566370 IGLC3P0DOY3 106 aa10.17□□□□□ -0.78
LINC00563-201ENST00000566370 TDRG1Q3Y452 100 aa10.17□□□□□ -0.78
LINC00563-201ENST00000566370 PRR31Q5SQ13 230 aa10.17□□□□□ -0.78
LINC00563-201ENST00000566370 TIMM8BQ9Y5J9 83 aaPredicted RBP10.17□□□□□ -0.78
LINC00563-201ENST00000566370 IGSF10Q6WRI0 2623 aa10.17□□□□□ -0.78
LINC00563-201ENST00000566370 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.17□□□□□ -0.78
LINC00563-201ENST00000566370 IGHV4-4A0A075B6R2 117 aa10.16□□□□□ -0.78
LINC00563-201ENST00000566370 IGKV3D-20A0A0C4DH25 116 aa10.16□□□□□ -0.78
LINC00563-201ENST00000566370 IFI27P40305 119 aaPredicted RBP10.16□□□□□ -0.78
LINC00563-201ENST00000566370 LEPP41159 167 aa10.16□□□□□ -0.78
LINC00563-201ENST00000566370 SNRPD3P62318 126 aaKnown RBP10.16□□□□□ -0.78
LINC00563-201ENST00000566370 Q6ZS46 218 aa10.16□□□□□ -0.78
LINC00563-201ENST00000566370 SPATA12Q7Z6I5 190 aa10.16□□□□□ -0.78
LINC00563-201ENST00000566370 MS4A6AQ9H2W1 248 aa10.16□□□□□ -0.78
LINC00563-201ENST00000566370 CACNA1BQ00975 2339 aa10.16□□□□□ -0.78
LINC00563-201ENST00000566370 MUC21A0A0G2JKD1 596 aa10.16□□□□□ -0.78
LINC00563-201ENST00000566370 MUC21A0A140T8X8 626 aa10.16□□□□□ -0.78
LINC00563-201ENST00000566370 LGALS9O00182 355 aa10.16□□□□□ -0.78
LINC00563-201ENST00000566370 PSMG4Q5JS54 123 aa10.16□□□□□ -0.78
LINC00563-201ENST00000566370 MUC21Q5SSG8 566 aa10.16□□□□□ -0.78
LINC00563-201ENST00000566370 ATOH7Q8N100 152 aa10.16□□□□□ -0.78
LINC00563-201ENST00000566370 MRAP2Q96G30 205 aa10.16□□□□□ -0.78
LINC00563-201ENST00000566370 C20orf173Q96LM9 149 aa10.16□□□□□ -0.78
LINC00563-201ENST00000566370 UBE2E2Q96LR5 201 aa10.16□□□□□ -0.78
LINC00563-201ENST00000566370 ZNF747Q9BV97 191 aa10.16□□□□□ -0.78
LINC00563-201ENST00000566370 SNHG12Q9BXW3 62 aa10.16□□□□□ -0.78
LINC00563-201ENST00000566370 ZMAT5Q9UDW3 170 aaKnown RBP10.16□□□□□ -0.78
LINC00563-201ENST00000566370 SMG1Q96Q15 3661 aaKnown RBP10.15□□□□□ -0.78
LINC00563-201ENST00000566370 EREGO14944 169 aa10.15□□□□□ -0.79
LINC00563-201ENST00000566370 NPYP01303 97 aa10.15□□□□□ -0.79
LINC00563-201ENST00000566370 RPLP1P05386 114 aaKnown RBP10.15□□□□□ -0.79
LINC00563-201ENST00000566370 SRSF1Q07955 248 aaKnown RBP eCLIP10.15□□□□□ -0.79
LINC00563-201ENST00000566370 LCNL1Q6ZST4 164 aa10.15□□□□□ -0.79
LINC00563-201ENST00000566370 Q96MF0 132 aa10.15□□□□□ -0.79
LINC00563-201ENST00000566370 PSMG3-AS1Q96PY0 264 aa10.15□□□□□ -0.79
LINC00563-201ENST00000566370 TNFRSF6BO95407 300 aa10.14□□□□□ -0.79
LINC00563-201ENST00000566370 PPP1R17O96001 155 aa10.14□□□□□ -0.79
LINC00563-201ENST00000566370 TMEM95Q3KNT9 176 aa10.14□□□□□ -0.79
LINC00563-201ENST00000566370 LINC01545Q5VT33 79 aa10.14□□□□□ -0.79
LINC00563-201ENST00000566370 TMEM86BQ8N661 226 aa10.14□□□□□ -0.79
LINC00563-201ENST00000566370 ODF3Q96PU9 254 aa10.14□□□□□ -0.79
LINC00563-201ENST00000566370 PMCHL2Q9BQD1 86 aa10.14□□□□□ -0.79
LINC00563-201ENST00000566370 MRPS16Q9Y3D3 137 aaKnown RBP10.14□□□□□ -0.79
LINC00563-201ENST00000566370 PHLDA3Q9Y5J5 127 aa10.14□□□□□ -0.79
LINC00563-201ENST00000566370 IGKV3-7A0A075B6H7 116 aa10.13□□□□□ -0.79
LINC00563-201ENST00000566370 A0A1B0GV90 55 aa10.13□□□□□ -0.79
LINC00563-201ENST00000566370 H0Y8G0 127 aa10.13□□□□□ -0.79
LINC00563-201ENST00000566370 H3BVH4 76 aa10.13□□□□□ -0.79
LINC00563-201ENST00000566370 HOXA3O43365 443 aaPredicted RBP10.13□□□□□ -0.79
LINC00563-201ENST00000566370 DUSP14O95147 198 aaKnown RBP10.13□□□□□ -0.79
LINC00563-201ENST00000566370 TSPOP30536 169 aa10.13□□□□□ -0.79
LINC00563-201ENST00000566370 RNASE4P34096 147 aaKnown RBP10.13□□□□□ -0.79
LINC00563-201ENST00000566370 COL5A1-AS1Q5SY13 56 aa10.13□□□□□ -0.79
LINC00563-201ENST00000566370 APRG1Q8IVJ8 170 aa10.13□□□□□ -0.79
LINC00563-201ENST00000566370 ZFAND2AQ8N6M9 145 aa10.13□□□□□ -0.79
LINC00563-201ENST00000566370 Q8N8P6 123 aa10.13□□□□□ -0.79
LINC00563-201ENST00000566370 MAPK1IP1LQ8NDC0 245 aa10.13□□□□□ -0.79
LINC00563-201ENST00000566370 RNF185Q96GF1 192 aa10.13□□□□□ -0.79
LINC00563-201ENST00000566370 C11orf21Q9P2W6 132 aa10.13□□□□□ -0.79
LINC00563-201ENST00000566370 NCR2O95944 276 aa10.12□□□□□ -0.79
LINC00563-201ENST00000566370 NUTF2P61970 127 aaKnown RBP10.12□□□□□ -0.79
LINC00563-201ENST00000566370 LGALS9BQ3B8N2 356 aa10.12□□□□□ -0.79
LINC00563-201ENST00000566370 LGALS9CQ6DKI2 356 aa10.12□□□□□ -0.79
LINC00563-201ENST00000566370 SLC25A34Q6PIV7 304 aa10.12□□□□□ -0.79
LINC00563-201ENST00000566370 FAM159AQ6UWV7 190 aa10.12□□□□□ -0.79
LINC00563-201ENST00000566370 RNF152Q8N8N0 203 aa10.12□□□□□ -0.79
LINC00563-201ENST00000566370 OR2K2Q8NGT1 345 aa10.12□□□□□ -0.79
LINC00563-201ENST00000566370 FAM19A4Q96LR4 140 aa10.12□□□□□ -0.79
LINC00563-201ENST00000566370 ZNF702PQ9H963 129 aa10.12□□□□□ -0.79
LINC00563-201ENST00000566370 MSRB1Q9NZV6 116 aa10.12□□□□□ -0.79
LINC00563-201ENST00000566370 TACC2O95359 2948 aa10.11□□□□□ -0.79
LINC00563-201ENST00000566370 SPTAN1Q13813 2472 aaKnown RBP10.11□□□□□ -0.79
LINC00563-201ENST00000566370 LINC01546A6NGU7 62 aa10.11□□□□□ -0.79
LINC00563-201ENST00000566370 SMKR1H3BMG3 65 aa10.11□□□□□ -0.79
LINC00563-201ENST00000566370 J3KRW8 73 aa10.11□□□□□ -0.79
LINC00563-201ENST00000566370 IGLL1P15814 213 aa10.11□□□□□ -0.79
LINC00563-201ENST00000566370 FCER1GP30273 86 aa10.11□□□□□ -0.79
LINC00563-201ENST00000566370 BATFQ16520 125 aa10.11□□□□□ -0.79
LINC00563-201ENST00000566370 MYOZ3Q8TDC0 251 aa10.11□□□□□ -0.79
LINC00563-201ENST00000566370 DPF1Q92782 380 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms