RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 SCGB1C1Q8TD33 95 aa7.15□□□□□ -1.26
CLK3-205ENST00000561673 WFDC1Q9HC57 220 aa7.15□□□□□ -1.26
CLK3-205ENST00000561673 MBD2Q9UBB5 411 aa7.15□□□□□ -1.26
CLK3-205ENST00000561673 TP53TG3Q9ULZ0 132 aa7.15□□□□□ -1.26
CLK3-205ENST00000561673 KLF12Q9Y4X4 402 aa7.15□□□□□ -1.26
CLK3-205ENST00000561673 TRGV2A0A075B6R0 118 aa7.14□□□□□ -1.27
CLK3-205ENST00000561673 TRGV1A0A0A0MS02 117 aa7.14□□□□□ -1.27
CLK3-205ENST00000561673 EIF3GO75821 320 aaKnown RBP eCLIP7.14□□□□□ -1.27
CLK3-205ENST00000561673 IFNA5P01569 189 aa7.14□□□□□ -1.27
CLK3-205ENST00000561673 ZNF138P52744 262 aa7.14□□□□□ -1.27
CLK3-205ENST00000561673 ESRGQ1W209 222 aa7.14□□□□□ -1.27
CLK3-205ENST00000561673 ANKRD39Q53RE8 183 aa7.14□□□□□ -1.27
CLK3-205ENST00000561673 CDPF1Q6NVV7 123 aa7.14□□□□□ -1.27
CLK3-205ENST00000561673 LYPD1Q8N2G4 141 aa7.14□□□□□ -1.27
CLK3-205ENST00000561673 Q8TAT8 98 aa7.14□□□□□ -1.27
CLK3-205ENST00000561673 Q9H3A6 140 aa7.14□□□□□ -1.27
CLK3-205ENST00000561673 Q9H8V8 135 aa7.14□□□□□ -1.27
CLK3-205ENST00000561673 HSPG2P98160 4391 aa7.14□□□□□ -1.27
CLK3-205ENST00000561673 RYR1P21817 5038 aa7.13□□□□□ -1.27
CLK3-205ENST00000561673 IGHV1OR15-1A0A075B7D0 117 aa7.13□□□□□ -1.27
CLK3-205ENST00000561673 H3BNG1 76 aa7.13□□□□□ -1.27
CLK3-205ENST00000561673 SPINK4O60575 86 aa7.13□□□□□ -1.27
CLK3-205ENST00000561673 MED14OSP0DP75 135 aa7.13□□□□□ -1.27
CLK3-205ENST00000561673 CSN1S1P47710 185 aa7.13□□□□□ -1.27
CLK3-205ENST00000561673 TCL1AP56279 114 aa7.13□□□□□ -1.27
CLK3-205ENST00000561673 UBE2L3P68036 154 aaKnown RBP7.13□□□□□ -1.27
CLK3-205ENST00000561673 KHDC3LQ587J8 217 aa7.13□□□□□ -1.27
CLK3-205ENST00000561673 VSIG2Q96IQ7 327 aa7.13□□□□□ -1.27
CLK3-205ENST00000561673 C18orf15Q96N68 181 aa7.13□□□□□ -1.27
CLK3-205ENST00000561673 TRBV7-9A0A0J9YWB2 115 aa7.12□□□□□ -1.27
CLK3-205ENST00000561673 RBAKDNA6NC62 111 aa7.12□□□□□ -1.27
CLK3-205ENST00000561673 DIRC3C9JPN6 131 aa7.12□□□□□ -1.27
CLK3-205ENST00000561673 TAS2R45P59539 299 aa7.12□□□□□ -1.27
CLK3-205ENST00000561673 IBA57Q5T440 356 aaKnown RBP7.12□□□□□ -1.27
CLK3-205ENST00000561673 C6orf223Q8N319 242 aa7.12□□□□□ -1.27
CLK3-205ENST00000561673 HYLS1Q96M11 299 aa7.12□□□□□ -1.27
CLK3-205ENST00000561673 BATF3Q9NR55 127 aa7.12□□□□□ -1.27
CLK3-205ENST00000561673 ALG5Q9Y673 324 aa7.12□□□□□ -1.27
CLK3-205ENST00000561673 A0A096LPF7 62 aa7.11□□□□□ -1.27
CLK3-205ENST00000561673 PGPA6NDG6 321 aa7.11□□□□□ -1.27
CLK3-205ENST00000561673 SUMO1P63165 101 aaKnown RBP7.11□□□□□ -1.27
CLK3-205ENST00000561673 ZNF266Q14584 549 aa7.11□□□□□ -1.27
CLK3-205ENST00000561673 ACOT6Q3I5F7 207 aaPredicted RBP7.11□□□□□ -1.27
CLK3-205ENST00000561673 LCE2AQ5TA79 106 aaPredicted RBP7.11□□□□□ -1.27
CLK3-205ENST00000561673 UPK3BQ9BT76 320 aa7.11□□□□□ -1.27
CLK3-205ENST00000561673 OTORQ9NRC9 128 aa7.11□□□□□ -1.27
CLK3-205ENST00000561673 DNAH5Q8TE73 4624 aa7.11□□□□□ -1.27
CLK3-205ENST00000561673 A0A1W2PPV4 95 aa7.1□□□□□ -1.27
CLK3-205ENST00000561673 IGHV3-53P01767 116 aa7.1□□□□□ -1.27
CLK3-205ENST00000561673 RAB2AP61019 212 aa7.1□□□□□ -1.27
CLK3-205ENST00000561673 MUC21Q5SSG8 566 aa7.1□□□□□ -1.27
CLK3-205ENST00000561673 ZNF575Q86XF7 245 aa7.1□□□□□ -1.27
CLK3-205ENST00000561673 ST6GAL2Q96JF0 529 aa7.1□□□□□ -1.27
CLK3-205ENST00000561673 ARPC5LQ9BPX5 153 aa7.1□□□□□ -1.27
CLK3-205ENST00000561673 KRTAP1-5Q9BYS1 174 aa7.1□□□□□ -1.27
CLK3-205ENST00000561673 MRPL16Q9NX20 251 aaKnown RBP7.1□□□□□ -1.27
CLK3-205ENST00000561673 MDFICQ9P1T7 246 aa7.1□□□□□ -1.27
CLK3-205ENST00000561673 MRPS16Q9Y3D3 137 aaKnown RBP7.1□□□□□ -1.27
CLK3-205ENST00000561673 LENEPQ9Y5L5 61 aa7.1□□□□□ -1.27
CLK3-205ENST00000561673 APOBP04114 4563 aaKnown RBP7.1□□□□□ -1.27
CLK3-205ENST00000561673 HMGB3O15347 200 aaKnown RBP7.09□□□□□ -1.27
CLK3-205ENST00000561673 PAX4O43316 350 aa7.09□□□□□ -1.27
CLK3-205ENST00000561673 Q6AWC8 147 aa7.09□□□□□ -1.27
CLK3-205ENST00000561673 PQLC2Q6ZP29 291 aa7.09□□□□□ -1.27
CLK3-205ENST00000561673 OR10G4Q8NGN3 311 aa7.09□□□□□ -1.27
CLK3-205ENST00000561673 OR10G9Q8NGN4 311 aa7.09□□□□□ -1.27
CLK3-205ENST00000561673 OR10G7Q8NGN6 311 aa7.09□□□□□ -1.27
CLK3-205ENST00000561673 TMED6Q8WW62 240 aa7.09□□□□□ -1.27
CLK3-205ENST00000561673 PTTG1O95997 202 aa7.08□□□□□ -1.28
CLK3-205ENST00000561673 ZNF415Q09FC8 603 aa7.08□□□□□ -1.28
CLK3-205ENST00000561673 FHL2Q14192 279 aa7.08□□□□□ -1.28
CLK3-205ENST00000561673 TMEM183BQ1AE95 376 aa7.08□□□□□ -1.28
CLK3-205ENST00000561673 Q5BKY6 102 aa7.08□□□□□ -1.28
CLK3-205ENST00000561673 FAM74A1Q5RGS3 127 aa7.08□□□□□ -1.28
CLK3-205ENST00000561673 GOLT1AQ6ZVE7 132 aa7.08□□□□□ -1.28
CLK3-205ENST00000561673 TMEM183AQ8IXX5 376 aa7.08□□□□□ -1.28
CLK3-205ENST00000561673 CMTM2Q8TAZ6 248 aa7.08□□□□□ -1.28
CLK3-205ENST00000561673 MED28Q9H204 178 aa7.08□□□□□ -1.28
CLK3-205ENST00000561673 PRO0255Q9UI72 69 aa7.08□□□□□ -1.28
CLK3-205ENST00000561673 RPH3ALQ9UNE2 315 aa7.08□□□□□ -1.28
CLK3-205ENST00000561673 HHLA3Q9XRX5 114 aa7.08□□□□□ -1.28
CLK3-205ENST00000561673 TRAV8-1A0A0A6YYK1 113 aa7.07□□□□□ -1.28
CLK3-205ENST00000561673 A0A1W2PPQ1 181 aa7.07□□□□□ -1.28
CLK3-205ENST00000561673 ARL14EPLP0DKL9 152 aa7.07□□□□□ -1.28
CLK3-205ENST00000561673 CRYBA4P53673 196 aa7.07□□□□□ -1.28
CLK3-205ENST00000561673 GNG5P63218 68 aa7.07□□□□□ -1.28
CLK3-205ENST00000561673 SLAQ13239 276 aa7.07□□□□□ -1.28
CLK3-205ENST00000561673 TTC32Q5I0X7 151 aa7.07□□□□□ -1.28
CLK3-205ENST00000561673 FAM159AQ6UWV7 190 aa7.07□□□□□ -1.28
CLK3-205ENST00000561673 ARL6IP6Q8N6S5 226 aa7.07□□□□□ -1.28
CLK3-205ENST00000561673 HSD17B11Q8NBQ5 300 aa7.07□□□□□ -1.28
CLK3-205ENST00000561673 OR2G3Q8NGZ4 309 aa7.07□□□□□ -1.28
CLK3-205ENST00000561673 RASL10AQ92737 203 aa7.07□□□□□ -1.28
CLK3-205ENST00000561673 TVP23CQ96ET8 276 aa7.07□□□□□ -1.28
CLK3-205ENST00000561673 C8orf49Q96NF6 230 aa7.07□□□□□ -1.28
CLK3-205ENST00000561673 AQP10Q96PS8 301 aa7.07□□□□□ -1.28
CLK3-205ENST00000561673 ICOSQ9Y6W8 199 aa7.07□□□□□ -1.28
CLK3-205ENST00000561673 ABCA13Q86UQ4 5058 aa7.07□□□□□ -1.28
CLK3-205ENST00000561673 C16orf90A8MZG2 172 aa7.06□□□□□ -1.28
CLK3-205ENST00000561673 GNRH2O43555 120 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms