RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 PAIP2Q9BPZ3 127 aaKnown RBP-0.11□□□□□ -2.43
HMBOX1-216ENST00000561377 GINS3Q9BRX5 216 aa-0.11□□□□□ -2.43
HMBOX1-216ENST00000561377 EIF3AQ14152 1382 aaKnown RBP-0.11□□□□□ -2.43
HMBOX1-216ENST00000561377 PTPN13Q12923 2485 aa-0.11□□□□□ -2.43
HMBOX1-216ENST00000561377 USP54Q70EL1 1684 aa-0.11□□□□□ -2.43
HMBOX1-216ENST00000561377 RBBP6Q7Z6E9 1792 aaKnown RBP-0.11□□□□□ -2.43
HMBOX1-216ENST00000561377 CDK13Q14004 1512 aaKnown RBP-0.12□□□□□ -2.43
HMBOX1-216ENST00000561377 NBDYA0A0U1RRE5 68 aa-0.12□□□□□ -2.43
HMBOX1-216ENST00000561377 C3orf85A0A1B0GTC6 90 aa-0.12□□□□□ -2.43
HMBOX1-216ENST00000561377 LOC107986453A0A1B0GWG9 222 aa-0.12□□□□□ -2.43
HMBOX1-216ENST00000561377 C10orf142B7Z368 130 aa-0.12□□□□□ -2.43
HMBOX1-216ENST00000561377 FXYD1O00168 92 aa-0.12□□□□□ -2.43
HMBOX1-216ENST00000561377 PFDN1O60925 122 aa-0.12□□□□□ -2.43
HMBOX1-216ENST00000561377 TPT1P13693 172 aaKnown RBP-0.12□□□□□ -2.43
HMBOX1-216ENST00000561377 ETV6P41212 452 aa-0.12□□□□□ -2.43
HMBOX1-216ENST00000561377 TCTAP57738 103 aa-0.12□□□□□ -2.43
HMBOX1-216ENST00000561377 ESPL1Q14674 2120 aa-0.12□□□□□ -2.43
HMBOX1-216ENST00000561377 MSMO1Q15800 293 aa-0.12□□□□□ -2.43
HMBOX1-216ENST00000561377 ASB16-AS1Q495Z4 193 aa-0.12□□□□□ -2.43
HMBOX1-216ENST00000561377 IDO2Q6ZQW0 420 aa-0.12□□□□□ -2.43
HMBOX1-216ENST00000561377 TMED4Q7Z7H5 227 aa-0.12□□□□□ -2.43
HMBOX1-216ENST00000561377 C5orf56Q8N8D9 126 aa-0.12□□□□□ -2.43
HMBOX1-216ENST00000561377 OR8J3Q8NGG0 315 aa-0.12□□□□□ -2.43
HMBOX1-216ENST00000561377 CHMP6Q96FZ7 201 aa-0.12□□□□□ -2.43
HMBOX1-216ENST00000561377 DMAC1Q96GE9 116 aa-0.12□□□□□ -2.43
HMBOX1-216ENST00000561377 CEP19Q96LK0 163 aa-0.12□□□□□ -2.43
HMBOX1-216ENST00000561377 DSCR8Q96T75 97 aa-0.12□□□□□ -2.43
HMBOX1-216ENST00000561377 PRR15LQ9BU68 103 aa-0.12□□□□□ -2.43
HMBOX1-216ENST00000561377 TMEM14BQ9NUH8 114 aa-0.12□□□□□ -2.43
HMBOX1-216ENST00000561377 MPC1Q9Y5U8 109 aa-0.12□□□□□ -2.43
HMBOX1-216ENST00000561377 U3KQA8 63 aa-0.12□□□□□ -2.43
HMBOX1-216ENST00000561377 NUP210Q8TEM1 1887 aaPredicted RBP-0.12□□□□□ -2.43
HMBOX1-216ENST00000561377 FGD6Q6ZV73 1430 aa-0.13□□□□□ -2.43
HMBOX1-216ENST00000561377 DLC1Q96QB1 1528 aa-0.13□□□□□ -2.43
HMBOX1-216ENST00000561377 FLNAP21333 2647 aaKnown RBP-0.13□□□□□ -2.43
HMBOX1-216ENST00000561377 ROCK1Q13464 1354 aa-0.13□□□□□ -2.43
HMBOX1-216ENST00000561377 TRAV12-2A0A075B6T6 113 aa-0.13□□□□□ -2.43
HMBOX1-216ENST00000561377 A0A0G2JMM0 328 aa-0.13□□□□□ -2.43
HMBOX1-216ENST00000561377 TPST1O60507 370 aa-0.13□□□□□ -2.43
HMBOX1-216ENST00000561377 FAM107AO95990 144 aa-0.13□□□□□ -2.43
HMBOX1-216ENST00000561377 MAXP61244 160 aa-0.13□□□□□ -2.43
HMBOX1-216ENST00000561377 RPL19P84098 196 aaKnown RBP-0.13□□□□□ -2.43
HMBOX1-216ENST00000561377 COX6A2Q02221 97 aa-0.13□□□□□ -2.43
HMBOX1-216ENST00000561377 ZNF56Q15929 161 aa-0.13□□□□□ -2.43
HMBOX1-216ENST00000561377 SNCBQ16143 134 aa-0.13□□□□□ -2.43
HMBOX1-216ENST00000561377 TMEM229BQ8NBD8 167 aa-0.13□□□□□ -2.43
HMBOX1-216ENST00000561377 OR5H6Q8NGV6 325 aa-0.13□□□□□ -2.43
HMBOX1-216ENST00000561377 CLEC2BQ92478 149 aa-0.13□□□□□ -2.43
HMBOX1-216ENST00000561377 BORCS8Q96FH0 119 aa-0.13□□□□□ -2.43
HMBOX1-216ENST00000561377 LINC00208Q96KT6 92 aa-0.13□□□□□ -2.43
HMBOX1-216ENST00000561377 VPS25Q9BRG1 176 aa-0.13□□□□□ -2.43
HMBOX1-216ENST00000561377 BPESC1Q9GZL8 116 aa-0.13□□□□□ -2.43
HMBOX1-216ENST00000561377 BIN3Q9NQY0 253 aa-0.13□□□□□ -2.43
HMBOX1-216ENST00000561377 STOML2Q9UJZ1 356 aa-0.13□□□□□ -2.43
HMBOX1-216ENST00000561377 LAMTOR2Q9Y2Q5 125 aa-0.13□□□□□ -2.43
HMBOX1-216ENST00000561377 NUBP2Q9Y5Y2 271 aa-0.13□□□□□ -2.43
HMBOX1-216ENST00000561377 MAP2P11137 1827 aaKnown RBP-0.13□□□□□ -2.43
HMBOX1-216ENST00000561377 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.13□□□□□ -2.43
HMBOX1-216ENST00000561377 TRBV7-6A0A0J9YX20 115 aa-0.14□□□□□ -2.43
HMBOX1-216ENST00000561377 TEX49A0A1B0GTD5 131 aa-0.14□□□□□ -2.43
HMBOX1-216ENST00000561377 PNMA8CA0A1B0GUJ8 204 aa-0.14□□□□□ -2.43
HMBOX1-216ENST00000561377 TRDV1A0A1B0GX56 115 aa-0.14□□□□□ -2.43
HMBOX1-216ENST00000561377 TMEM30CPA0ZSE6 113 aa-0.14□□□□□ -2.43
HMBOX1-216ENST00000561377 TMEM189A5PLL7 270 aa-0.14□□□□□ -2.43
HMBOX1-216ENST00000561377 F2Z2F3 143 aa-0.14□□□□□ -2.43
HMBOX1-216ENST00000561377 IFNA21P01568 189 aa-0.14□□□□□ -2.43
HMBOX1-216ENST00000561377 APOC1P02654 83 aa-0.14□□□□□ -2.43
HMBOX1-216ENST00000561377 CSN2P05814 226 aa-0.14□□□□□ -2.43
HMBOX1-216ENST00000561377 BCL2P10415 239 aa-0.14□□□□□ -2.43
HMBOX1-216ENST00000561377 FABP2P12104 132 aa-0.14□□□□□ -2.43
HMBOX1-216ENST00000561377 SDC2P34741 201 aa-0.14□□□□□ -2.43
HMBOX1-216ENST00000561377 GNG3P63215 75 aa-0.14□□□□□ -2.43
HMBOX1-216ENST00000561377 CSAG1Q6PB30 78 aa-0.14□□□□□ -2.43
HMBOX1-216ENST00000561377 DGCR14Q96DF8 476 aaKnown RBP-0.14□□□□□ -2.43
HMBOX1-216ENST00000561377 PRELID3AQ96N28 172 aa-0.14□□□□□ -2.43
HMBOX1-216ENST00000561377 SMIM7Q9BQ49 75 aa-0.14□□□□□ -2.43
HMBOX1-216ENST00000561377 ATG5Q9H1Y0 275 aa-0.14□□□□□ -2.43
HMBOX1-216ENST00000561377 COA4Q9NYJ1 87 aa-0.14□□□□□ -2.43
HMBOX1-216ENST00000561377 IL20Q9NYY1 176 aa-0.14□□□□□ -2.43
HMBOX1-216ENST00000561377 MRPL36Q9P0J6 103 aaKnown RBP-0.14□□□□□ -2.43
HMBOX1-216ENST00000561377 TECPR2O15040 1411 aa-0.14□□□□□ -2.43
HMBOX1-216ENST00000561377 SOGA1O94964 1423 aa-0.14□□□□□ -2.43
HMBOX1-216ENST00000561377 PTPRGP23470 1445 aa-0.14□□□□□ -2.43
HMBOX1-216ENST00000561377 SYNMO15061 1565 aa-0.15□□□□□ -2.43
HMBOX1-216ENST00000561377 ABCA1O95477 2261 aa-0.15□□□□□ -2.43
HMBOX1-216ENST00000561377 MYH1P12882 1939 aa-0.15□□□□□ -2.43
HMBOX1-216ENST00000561377 NCOR1O75376 2440 aa-0.15□□□□□ -2.43
HMBOX1-216ENST00000561377 SPAG17Q6Q759 2223 aa-0.15□□□□□ -2.43
HMBOX1-216ENST00000561377 WDR97A6NE52 1622 aa-0.15□□□□□ -2.43
HMBOX1-216ENST00000561377 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.15□□□□□ -2.43
HMBOX1-216ENST00000561377 TRAV2A0A0B4J234 112 aa-0.15□□□□□ -2.43
HMBOX1-216ENST00000561377 TRBV10-1A0A0K0K1A3 114 aa-0.15□□□□□ -2.43
HMBOX1-216ENST00000561377 TRBV27A0A0K0K1C4 114 aa-0.15□□□□□ -2.43
HMBOX1-216ENST00000561377 LOC101927531A0A1B0GV80 90 aa-0.15□□□□□ -2.43
HMBOX1-216ENST00000561377 MFSD11O43934 449 aa-0.15□□□□□ -2.43
HMBOX1-216ENST00000561377 EDF1O60869 148 aaKnown RBP-0.15□□□□□ -2.43
HMBOX1-216ENST00000561377 MPC1LP0DKB6 136 aa-0.15□□□□□ -2.43
HMBOX1-216ENST00000561377 GTF2A1P52655 376 aaPredicted RBP-0.15□□□□□ -2.43
HMBOX1-216ENST00000561377 RHOHQ15669 191 aa-0.15□□□□□ -2.43
HMBOX1-216ENST00000561377 LYPD5Q6UWN5 251 aa-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms