RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 RPP21Q9H633 154 aaKnown RBP7.68□□□□□ -1.18
USP3-219ENST00000561326 MAP6D1Q9H9H5 199 aa7.68□□□□□ -1.18
USP3-219ENST00000561326 STAB1Q9NY15 2570 aa7.68□□□□□ -1.18
USP3-219ENST00000561326 CRISP2P16562 243 aa7.67□□□□□ -1.18
USP3-219ENST00000561326 DEFB1P60022 68 aa7.67□□□□□ -1.18
USP3-219ENST00000561326 RPS20P60866 119 aaKnown RBP7.67□□□□□ -1.18
USP3-219ENST00000561326 BEAN1Q3B7T3 259 aa7.67□□□□□ -1.18
USP3-219ENST00000561326 CT83Q5H943 113 aa7.67□□□□□ -1.18
USP3-219ENST00000561326 ACTL10Q5JWF8 245 aa7.67□□□□□ -1.18
USP3-219ENST00000561326 IL36BQ9NZH7 164 aa7.67□□□□□ -1.18
USP3-219ENST00000561326 V9GYV3 84 aa7.67□□□□□ -1.18
USP3-219ENST00000561326 VWFP04275 2813 aa7.67□□□□□ -1.18
USP3-219ENST00000561326 TRAV9-1A0A075B6T8 112 aa7.66□□□□□ -1.18
USP3-219ENST00000561326 TRAV21A0A0B4J279 112 aa7.66□□□□□ -1.18
USP3-219ENST00000561326 TMEM189A5PLL7 270 aa7.66□□□□□ -1.18
USP3-219ENST00000561326 FAM231BA6NCW3 169 aa7.66□□□□□ -1.18
USP3-219ENST00000561326 H3BMM0 161 aa7.66□□□□□ -1.18
USP3-219ENST00000561326 SH2D1AO60880 128 aa7.66□□□□□ -1.18
USP3-219ENST00000561326 PFN1P07737 140 aaKnown RBP7.66□□□□□ -1.18
USP3-219ENST00000561326 HLA-DRB4P13762 266 aa7.66□□□□□ -1.18
USP3-219ENST00000561326 RNASE4P34096 147 aaKnown RBP7.66□□□□□ -1.18
USP3-219ENST00000561326 CRIP1P50238 77 aa7.66□□□□□ -1.18
USP3-219ENST00000561326 GDF5OSQ5U4N7 250 aa7.66□□□□□ -1.18
USP3-219ENST00000561326 LINC00322Q6ZN03 302 aaPredicted RBP7.66□□□□□ -1.18
USP3-219ENST00000561326 STHQ8IWL8 128 aa7.66□□□□□ -1.18
USP3-219ENST00000561326 OR2D3Q8NGH3 330 aa7.66□□□□□ -1.18
USP3-219ENST00000561326 TSKUQ8WUA8 353 aa7.66□□□□□ -1.18
USP3-219ENST00000561326 FAM19A4Q96LR4 140 aa7.66□□□□□ -1.18
USP3-219ENST00000561326 CLUHP3Q96NS8 147 aa7.66□□□□□ -1.18
USP3-219ENST00000561326 ZMAT5Q9UDW3 170 aaKnown RBP7.66□□□□□ -1.18
USP3-219ENST00000561326 URGCP-MRPS24S4R325 110 aa7.66□□□□□ -1.18
USP3-219ENST00000561326 HLA-DRB4X5D2U9 266 aa7.66□□□□□ -1.18
USP3-219ENST00000561326 KNCNA6PVL3 124 aa7.65□□□□□ -1.18
USP3-219ENST00000561326 IGKV3-20P01619 116 aa7.65□□□□□ -1.18
USP3-219ENST00000561326 ORM1P02763 201 aa7.65□□□□□ -1.18
USP3-219ENST00000561326 CDKN1BP46527 198 aa7.65□□□□□ -1.18
USP3-219ENST00000561326 NUTF2P61970 127 aaKnown RBP7.65□□□□□ -1.18
USP3-219ENST00000561326 ELOBQ15370 118 aa7.65□□□□□ -1.18
USP3-219ENST00000561326 ODF3L2Q3SX64 289 aa7.65□□□□□ -1.18
USP3-219ENST00000561326 GTSCR1Q86UQ5 136 aa7.65□□□□□ -1.18
USP3-219ENST00000561326 APRG1Q8IVJ8 170 aa7.65□□□□□ -1.18
USP3-219ENST00000561326 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.65□□□□□ -1.18
USP3-219ENST00000561326 GFRA4Q9GZZ7 299 aa7.65□□□□□ -1.18
USP3-219ENST00000561326 TRBV24-1A0A075B6N3 115 aa7.64□□□□□ -1.19
USP3-219ENST00000561326 SMIM27A0A1W2PRY6 76 aa7.64□□□□□ -1.19
USP3-219ENST00000561326 A8MTW9 85 aa7.64□□□□□ -1.19
USP3-219ENST00000561326 J3KRW8 73 aa7.64□□□□□ -1.19
USP3-219ENST00000561326 AMBPP02760 352 aa7.64□□□□□ -1.19
USP3-219ENST00000561326 IGLL1P15814 213 aa7.64□□□□□ -1.19
USP3-219ENST00000561326 ZNF80P51504 273 aaPredicted RBP7.64□□□□□ -1.19
USP3-219ENST00000561326 FAM3BP58499 235 aaPredicted RBP7.64□□□□□ -1.19
USP3-219ENST00000561326 PRR31Q5SQ13 230 aa7.64□□□□□ -1.19
USP3-219ENST00000561326 ZFAND2AQ8N6M9 145 aa7.64□□□□□ -1.19
USP3-219ENST00000561326 NAT8BQ9UHF3 227 aa7.64□□□□□ -1.19
USP3-219ENST00000561326 A0A1W2PPQ1 181 aa7.63□□□□□ -1.19
USP3-219ENST00000561326 C7orf71A4D174 169 aa7.63□□□□□ -1.19
USP3-219ENST00000561326 COLCA2A8K830 154 aa7.63□□□□□ -1.19
USP3-219ENST00000561326 KLLNB2CW77 178 aa7.63□□□□□ -1.19
USP3-219ENST00000561326 WIPF1O43516 503 aa7.63□□□□□ -1.19
USP3-219ENST00000561326 Q6AWC8 147 aa7.63□□□□□ -1.19
USP3-219ENST00000561326 BORCS7Q96B45 105 aa7.63□□□□□ -1.19
USP3-219ENST00000561326 FAM210BQ96KR6 192 aa7.63□□□□□ -1.19
USP3-219ENST00000561326 HIGD1CA8MV81 97 aa7.62□□□□□ -1.19
USP3-219ENST00000561326 CA1P00915 261 aaPredicted RBP7.62□□□□□ -1.19
USP3-219ENST00000561326 CD7P09564 240 aa7.62□□□□□ -1.19
USP3-219ENST00000561326 SPINK13Q1W4C9 94 aa7.62□□□□□ -1.19
USP3-219ENST00000561326 LINC01559Q495D7 138 aa7.62□□□□□ -1.19
USP3-219ENST00000561326 COX19Q49B96 90 aa7.62□□□□□ -1.19
USP3-219ENST00000561326 FAM159AQ6UWV7 190 aa7.62□□□□□ -1.19
USP3-219ENST00000561326 AMTNQ6UX39 209 aa7.62□□□□□ -1.19
USP3-219ENST00000561326 KCNS1Q96KK3 526 aa7.62□□□□□ -1.19
USP3-219ENST00000561326 PYGO2Q9BRQ0 406 aa7.62□□□□□ -1.19
USP3-219ENST00000561326 TGIF2-C20orf24A0A0A6YYL0 155 aa7.61□□□□□ -1.19
USP3-219ENST00000561326 TRAV12-3A0A0B4J271 114 aa7.61□□□□□ -1.19
USP3-219ENST00000561326 M0R2Z0 102 aa7.61□□□□□ -1.19
USP3-219ENST00000561326 RAB5AP20339 215 aa7.61□□□□□ -1.19
USP3-219ENST00000561326 FOXA3P55318 350 aaPredicted RBP7.61□□□□□ -1.19
USP3-219ENST00000561326 TCL1AP56279 114 aa7.61□□□□□ -1.19
USP3-219ENST00000561326 ZNF124Q15973 351 aa7.61□□□□□ -1.19
USP3-219ENST00000561326 NUP35Q8NFH5 326 aa7.61□□□□□ -1.19
USP3-219ENST00000561326 YPEL4Q96NS1 127 aa7.61□□□□□ -1.19
USP3-219ENST00000561326 NEU1Q99519 415 aa7.61□□□□□ -1.19
USP3-219ENST00000561326 C20orf144Q9BQM9 153 aa7.61□□□□□ -1.19
USP3-219ENST00000561326 TMSB15BA0A087X1C1 80 aa7.6□□□□□ -1.19
USP3-219ENST00000561326 F2Z2F3 143 aa7.6□□□□□ -1.19
USP3-219ENST00000561326 ZNF324O75467 553 aaPredicted RBP7.6□□□□□ -1.19
USP3-219ENST00000561326 CXCL1P09341 107 aa7.6□□□□□ -1.19
USP3-219ENST00000561326 GZMBP10144 247 aa7.6□□□□□ -1.19
USP3-219ENST00000561326 RPS10P46783 165 aaKnown RBP7.6□□□□□ -1.19
USP3-219ENST00000561326 RIGQ13278 110 aa7.6□□□□□ -1.19
USP3-219ENST00000561326 PRR9Q5T870 116 aa7.6□□□□□ -1.19
USP3-219ENST00000561326 GFI1BQ5VTD9 330 aa7.6□□□□□ -1.19
USP3-219ENST00000561326 MORN3Q6PF18 240 aaPredicted RBP7.6□□□□□ -1.19
USP3-219ENST00000561326 RASL11AQ6T310 242 aa7.6□□□□□ -1.19
USP3-219ENST00000561326 TRPT1Q86TN4 253 aaKnown RBP7.6□□□□□ -1.19
USP3-219ENST00000561326 SPATA3Q8NHX4 192 aa7.6□□□□□ -1.19
USP3-219ENST00000561326 PGLYRP4Q96LB8 373 aa7.6□□□□□ -1.19
USP3-219ENST00000561326 C1QTNF4Q9BXJ3 329 aa7.6□□□□□ -1.19
USP3-219ENST00000561326 C19orf73Q9NVV2 129 aa7.6□□□□□ -1.19
USP3-219ENST00000561326 NAGKQ9UJ70 344 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms