RNA–Protein interactions for RNA: ENST00000560881.5

RPL28-211, Transcript of ribosomal protein L28, humanhuman

TSL 5

Gene RPL28, Length 1,692 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-211ENST00000560881 SPINK13Q1W4C9 94 aa12.13□□□□□ -0.47
RPL28-211ENST00000560881 OR11H2Q8NH07 326 aa12.13□□□□□ -0.47
RPL28-211ENST00000560881 CLUHP3Q96NS8 147 aa12.13□□□□□ -0.47
RPL28-211ENST00000560881 ACTR3CQ9C0K3 210 aaPredicted RBP12.13□□□□□ -0.47
RPL28-211ENST00000560881 Q9H3A6 140 aa12.13□□□□□ -0.47
RPL28-211ENST00000560881 AAMDCQ9H7C9 122 aa12.13□□□□□ -0.47
RPL28-211ENST00000560881 EDA2RQ9HAV5 297 aa12.13□□□□□ -0.47
RPL28-211ENST00000560881 TMEM242Q9NWH2 141 aa12.13□□□□□ -0.47
RPL28-211ENST00000560881 DUSP14O95147 198 aaKnown RBP12.12□□□□□ -0.47
RPL28-211ENST00000560881 IGKV2-40A0A087WW87 121 aaPredicted RBP12.11□□□□□ -0.47
RPL28-211ENST00000560881 ZNF727A8MUV8 499 aa12.11□□□□□ -0.47
RPL28-211ENST00000560881 IGKV2D-40P01614 121 aaPredicted RBP12.11□□□□□ -0.47
RPL28-211ENST00000560881 PNRC1Q12796 327 aaPredicted RBP12.11□□□□□ -0.47
RPL28-211ENST00000560881 WWC2-AS2Q96NR7 200 aa12.11□□□□□ -0.47
RPL28-211ENST00000560881 TRAV12-2A0A075B6T6 113 aa12.1□□□□□ -0.47
RPL28-211ENST00000560881 TRAV1-1A0A0B4J248 108 aa12.1□□□□□ -0.47
RPL28-211ENST00000560881 A0A1B0GV90 55 aa12.1□□□□□ -0.47
RPL28-211ENST00000560881 GCHFRP30047 84 aa12.1□□□□□ -0.47
RPL28-211ENST00000560881 FGF8P55075 233 aaPredicted RBP12.1□□□□□ -0.47
RPL28-211ENST00000560881 CCL20P78556 96 aa12.1□□□□□ -0.47
RPL28-211ENST00000560881 ERCC8Q13216 396 aa12.1□□□□□ -0.47
RPL28-211ENST00000560881 CDPF1Q6NVV7 123 aa12.1□□□□□ -0.47
RPL28-211ENST00000560881 OR10J6PQ8NGY7 276 aa12.1□□□□□ -0.47
RPL28-211ENST00000560881 MRPL53Q96EL3 112 aaKnown RBP12.1□□□□□ -0.47
RPL28-211ENST00000560881 A0A0J9YWU9 116 aa12.1□□□□□ -0.47
RPL28-211ENST00000560881 CTXND1A0A1B0GTU2 59 aa12.1□□□□□ -0.47
RPL28-211ENST00000560881 DEFB4AO15263 64 aa12.1□□□□□ -0.47
RPL28-211ENST00000560881 FAM210BQ96KR6 192 aa12.1□□□□□ -0.47
RPL28-211ENST00000560881 C1QTNF4Q9BXJ3 329 aa12.1□□□□□ -0.47
RPL28-211ENST00000560881 IGHV3OR16-12A0A075B7B8 117 aa12.09□□□□□ -0.47
RPL28-211ENST00000560881 TGIF2-C20orf24A0A0A6YYL0 155 aa12.09□□□□□ -0.47
RPL28-211ENST00000560881 CRXO43186 299 aaPredicted RBP12.09□□□□□ -0.47
RPL28-211ENST00000560881 KIR3DS1Q14943 382 aa12.09□□□□□ -0.47
RPL28-211ENST00000560881 X6R8D5 127 aa12.09□□□□□ -0.47
RPL28-211ENST00000560881 LOC102723971A0A1B0GUV8 181 aa12.08□□□□□ -0.48
RPL28-211ENST00000560881 CXorf1O96002 111 aa12.08□□□□□ -0.48
RPL28-211ENST00000560881 TRGC2P03986 189 aa12.08□□□□□ -0.48
RPL28-211ENST00000560881 TRGC1P0CF51 173 aa12.08□□□□□ -0.48
RPL28-211ENST00000560881 CYB561D1Q8N8Q1 229 aa12.08□□□□□ -0.48
RPL28-211ENST00000560881 PPP1R14DQ9NXH3 145 aa12.08□□□□□ -0.48
RPL28-211ENST00000560881 RPH3ALQ9UNE2 315 aa12.08□□□□□ -0.48
RPL28-211ENST00000560881 TRBV24-1A0A075B6N3 115 aa12.07□□□□□ -0.48
RPL28-211ENST00000560881 A0A1B0GV50 99 aa12.07□□□□□ -0.48
RPL28-211ENST00000560881 PGPA6NDG6 321 aa12.07□□□□□ -0.48
RPL28-211ENST00000560881 NPIPB6E9PJ23 425 aa12.07□□□□□ -0.48
RPL28-211ENST00000560881 J3KRW8 73 aa12.07□□□□□ -0.48
RPL28-211ENST00000560881 RBMY1A1P0DJD3 496 aaKnown RBP12.07□□□□□ -0.48
RPL28-211ENST00000560881 RBMY1CP0DJD4 496 aa12.07□□□□□ -0.48
RPL28-211ENST00000560881 CT45A10P0DMU9 189 aa12.07□□□□□ -0.48
RPL28-211ENST00000560881 RBMY1FQ15415 496 aaKnown RBP12.07□□□□□ -0.48
RPL28-211ENST00000560881 C1orf158Q8N1D5 194 aa12.07□□□□□ -0.48
RPL28-211ENST00000560881 LYPD1Q8N2G4 141 aa12.07□□□□□ -0.48
RPL28-211ENST00000560881 VGLL1Q99990 258 aa12.07□□□□□ -0.48
RPL28-211ENST00000560881 CTDSP1Q9GZU7 261 aa12.07□□□□□ -0.48
RPL28-211ENST00000560881 CSMD3Q7Z407 3707 aa12.07□□□□□ -0.48
RPL28-211ENST00000560881 MAP1LC3B2A6NCE7 125 aa12.06□□□□□ -0.48
RPL28-211ENST00000560881 PHOX2AO14813 284 aa12.06□□□□□ -0.48
RPL28-211ENST00000560881 JOSD1Q15040 202 aaPredicted RBP12.06□□□□□ -0.48
RPL28-211ENST00000560881 Q8NAQ8 132 aa12.06□□□□□ -0.48
RPL28-211ENST00000560881 FRZBQ92765 325 aa12.06□□□□□ -0.48
RPL28-211ENST00000560881 PACRGQ96M98 296 aaPredicted RBP12.06□□□□□ -0.48
RPL28-211ENST00000560881 MAP1LC3BQ9GZQ8 125 aa12.06□□□□□ -0.48
RPL28-211ENST00000560881 AGPAT4-IT1Q9H0P7 198 aa12.06□□□□□ -0.48
RPL28-211ENST00000560881 OTORQ9NRC9 128 aa12.06□□□□□ -0.48
RPL28-211ENST00000560881 STARD9Q9P2P6 4700 aa12.06□□□□□ -0.48
RPL28-211ENST00000560881 FABP4P15090 132 aa12.06□□□□□ -0.48
RPL28-211ENST00000560881 GNG5P63218 68 aa12.06□□□□□ -0.48
RPL28-211ENST00000560881 GFI1BQ5VTD9 330 aa12.06□□□□□ -0.48
RPL28-211ENST00000560881 ZNF705AQ6ZN79 300 aaPredicted RBP12.06□□□□□ -0.48
RPL28-211ENST00000560881 IGF2BP2-AS1Q96M15 143 aa12.06□□□□□ -0.48
RPL28-211ENST00000560881 HIST1H2BLQ99880 126 aa12.06□□□□□ -0.48
RPL28-211ENST00000560881 IGHV4-28A0A0C4DH34 117 aa12.05□□□□□ -0.48
RPL28-211ENST00000560881 GGTLC3B5MD39 225 aa12.05□□□□□ -0.48
RPL28-211ENST00000560881 PRM2P04554 102 aa12.05□□□□□ -0.48
RPL28-211ENST00000560881 TMEM183AQ8IXX5 376 aa12.05□□□□□ -0.48
RPL28-211ENST00000560881 Q8TAT8 98 aa12.05□□□□□ -0.48
RPL28-211ENST00000560881 TMEM167BQ9NRX6 74 aa12.05□□□□□ -0.48
RPL28-211ENST00000560881 URGCP-MRPS24S4R325 110 aa12.05□□□□□ -0.48
RPL28-211ENST00000560881 DIRC3C9JPN6 131 aa12.04□□□□□ -0.48
RPL28-211ENST00000560881 INSP01308 110 aa12.04□□□□□ -0.48
RPL28-211ENST00000560881 BTF3P20290 206 aaKnown RBP12.04□□□□□ -0.48
RPL28-211ENST00000560881 CDKN1BP46527 198 aa12.04□□□□□ -0.48
RPL28-211ENST00000560881 CSN1S1P47710 185 aa12.04□□□□□ -0.48
RPL28-211ENST00000560881 UBE2G2P60604 165 aa12.04□□□□□ -0.48
RPL28-211ENST00000560881 COA6Q5JTJ3 125 aaKnown RBP12.04□□□□□ -0.48
RPL28-211ENST00000560881 NDUFAF3Q9BU61 184 aa12.04□□□□□ -0.48
RPL28-211ENST00000560881 C9orf47Q6ZRZ4 202 aa12.03□□□□□ -0.48
RPL28-211ENST00000560881 CMTM2Q8TAZ6 248 aa12.03□□□□□ -0.48
RPL28-211ENST00000560881 YTHDF2Q9Y5A9 579 aaKnown RBP12.03□□□□□ -0.48
RPL28-211ENST00000560881 AMBPP02760 352 aa12.03□□□□□ -0.48
RPL28-211ENST00000560881 SLC25A5P05141 298 aaKnown RBP12.03□□□□□ -0.48
RPL28-211ENST00000560881 CEBPGP53567 150 aa12.03□□□□□ -0.48
RPL28-211ENST00000560881 GOLT1AQ6ZVE7 132 aa12.03□□□□□ -0.48
RPL28-211ENST00000560881 NEU1Q99519 415 aa12.03□□□□□ -0.48
RPL28-211ENST00000560881 PRO1933Q9H354 126 aa12.03□□□□□ -0.48
RPL28-211ENST00000560881 GOLT1BQ9Y3E0 138 aa12.03□□□□□ -0.48
RPL28-211ENST00000560881 GCGP01275 180 aa12.02□□□□□ -0.49
RPL28-211ENST00000560881 MIFP14174 115 aa12.02□□□□□ -0.49
RPL28-211ENST00000560881 SUMO1P63165 101 aaKnown RBP12.02□□□□□ -0.49
RPL28-211ENST00000560881 PMS2P11Q13670 270 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms