RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 B9A039 149 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 D6R8Y8 96 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 H3BRM9 83 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 K7EP34 96 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 M0R1W7 72 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 M0R3E3 92 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 TIMM23O14925 209 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 SIVA1O15304 175 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 NBR2O15453 112 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 SH2D1AO60880 128 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 HBDP02042 147 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 IL4P05112 153 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 PF4V1P10720 104 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 GPR183P32249 361 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 CRIP1P50238 77 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 LMO4P61968 165 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 NDPQ00604 133 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 COTL1Q14019 142 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 EBI3Q14213 229 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 PLGLAQ15195 96 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 FBXL19-AS1Q494R0 122 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 MRPL51Q4U2R6 128 aaKnown RBP1.88□□□□□ -2.11
SPG11-223ENST00000560858 OCIAD2Q56VL3 154 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 PSMG4Q5JS54 123 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 LDLRAD2Q5SZI1 272 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 LCE1CQ5T751 118 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 LCE1BQ5T7P3 118 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 GFRALQ6UXV0 394 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 ADAMTSL5Q6ZMM2 481 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 FA2HQ7L5A8 372 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 S100A7AQ86SG5 101 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 ORMDL3Q8N138 153 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 OR11H6Q8NGC7 330 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 OR4X2Q8NGF9 303 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 CCL17Q92583 94 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 RPEQ96AT9 228 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 RNF185Q96GF1 192 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 C17orf77Q96MU5 243 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 PRELID3AQ96N28 172 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 CST9LQ9H4G1 147 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 DYNLRB1Q9NP97 96 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 SIGLEC8Q9NYZ4 499 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 HIGD1BQ9P298 99 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 RALYQ9UKM9 306 aaKnown RBP1.88□□□□□ -2.11
SPG11-223ENST00000560858 MYO15AQ9UKN7 3530 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 CACNA1HO95180 2353 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 ABCA1O95477 2261 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 VPS13AQ96RL7 3174 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 IGLV2-18A0A075B6J9 118 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 IGKV2-40A0A087WW87 121 aaPredicted RBP1.87□□□□□ -2.11
SPG11-223ENST00000560858 PPIAL4CA0A0B4J2A2 164 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP1.87□□□□□ -2.11
SPG11-223ENST00000560858 C7orf71A4D174 169 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 TMEM189A5PLL7 270 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 A6NDN8 102 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 K7ERU9 68 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 ENSAO43768 121 aaKnown RBP1.87□□□□□ -2.11
SPG11-223ENST00000560858 GNG7O60262 68 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 SCGB2A1O75556 95 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 KRTAP5-8O75690 187 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 NPYP01303 97 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 IGKV2D-40P01614 121 aaPredicted RBP1.87□□□□□ -2.11
SPG11-223ENST00000560858 IGHG4P01861 327 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 CSN3P07498 182 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 FAM106CPP0CH98 169 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 APELAP0DMC3 54 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 PPIAL4GP0DN37 164 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 RPL7P18124 248 aaKnown RBP1.87□□□□□ -2.11
SPG11-223ENST00000560858 COX7A1P24310 79 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 BMI1P35226 326 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 IFI27P40305 119 aaPredicted RBP1.87□□□□□ -2.11
SPG11-223ENST00000560858 ZNF138P52744 262 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 MFAP4P55083 255 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 DLX1P56177 255 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 CACNG7P62955 275 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 LOXL1Q08397 574 aaPredicted RBP1.87□□□□□ -2.11
SPG11-223ENST00000560858 VAMP3Q15836 100 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 C5orf64Q2M2E5 130 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 FAM106AQ4KMX7 169 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 TMEM97Q5BJF2 176 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 AMMECR1LQ6DCA0 310 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 C11orf71Q6IPW1 123 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 LYZL1Q6UWQ5 148 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 IL17RELQ6ZVW7 336 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 NEGR1Q7Z3B1 354 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 LHFPL4Q7Z7J7 247 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 AMN1Q8IY45 258 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 TTC9CQ8N5M4 171 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 FER1L6-AS1Q8NA97 138 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 OR5A1Q8NGJ0 315 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 PHLDA1Q8WV24 401 aaPredicted RBP1.87□□□□□ -2.11
SPG11-223ENST00000560858 ARPC1AQ92747 370 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 IFI27L1Q96BM0 104 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 MRPL53Q96EL3 112 aaKnown RBP1.87□□□□□ -2.11
SPG11-223ENST00000560858 PCNX1Q96RV3 2341 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 MCRIP2Q9BUT9 160 aaKnown RBP1.87□□□□□ -2.11
SPG11-223ENST00000560858 MAP1LC3AQ9H492 121 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 NXT2Q9NPJ8 142 aaKnown RBP1.87□□□□□ -2.11
SPG11-223ENST00000560858 C21orf62Q9NYP8 219 aa1.87□□□□□ -2.11
SPG11-223ENST00000560858 DPM3Q9P2X0 92 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms