RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 BLCAPP62952 87 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 RHOHQ15669 191 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 NEDD8Q15843 81 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 GLYATL3Q5SZD4 288 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 Q5XG85 94 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 PPP1R2P3Q6NXS1 205 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 CSAG1Q6PB30 78 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 HRCT1Q6UXD1 115 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 CASC2Q6XLA1 102 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 LINC00305Q7Z4B0 112 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 STX12Q86Y82 276 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 TCTEX1D1Q8N7M0 179 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 OR9Q1Q8NGQ5 310 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 OR5H6Q8NGV6 325 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 CLEC2BQ92478 149 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 LINC00208Q96KT6 92 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 PRELID3AQ96N28 172 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 LXNQ9BS40 222 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 DDA1Q9BW61 102 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 LPAR5Q9H1C0 372 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 CBLN4Q9NTU7 201 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 FKBP11Q9NYL4 201 aa0.03□□□□□ -2.4
SPG11-222ENST00000560435 MRPL35Q9NZE8 188 aaKnown RBP0.03□□□□□ -2.4
SPG11-222ENST00000560435 TCOF1Q13428 1488 aaKnown RBP0.03□□□□□ -2.41
SPG11-222ENST00000560435 TANC2Q9HCD6 1990 aa0.03□□□□□ -2.41
SPG11-222ENST00000560435 FRAS1Q86XX4 4008 aa0.03□□□□□ -2.41
SPG11-222ENST00000560435 PIEZO1Q92508 2521 aa0.03□□□□□ -2.41
SPG11-222ENST00000560435 ANKRD17O75179 2603 aaKnown RBP0.02□□□□□ -2.41
SPG11-222ENST00000560435 SPTBP11277 2137 aa0.02□□□□□ -2.41
SPG11-222ENST00000560435 KNTC1P50748 2209 aa0.02□□□□□ -2.41
SPG11-222ENST00000560435 NUP210Q8TEM1 1887 aaPredicted RBP0.02□□□□□ -2.41
SPG11-222ENST00000560435 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.02□□□□□ -2.41
SPG11-222ENST00000560435 LOC107984640A0A0U1RRK4 108 aa0.02□□□□□ -2.41
SPG11-222ENST00000560435 LOC107986453A0A1B0GWG9 222 aa0.02□□□□□ -2.41
SPG11-222ENST00000560435 PRORSD1PA6NEY8 169 aa0.02□□□□□ -2.41
SPG11-222ENST00000560435 IFITM5A6NNB3 132 aa0.02□□□□□ -2.41
SPG11-222ENST00000560435 BBIP1A8MTZ0 92 aa0.02□□□□□ -2.41
SPG11-222ENST00000560435 C5orf58C9J3I9 102 aa0.02□□□□□ -2.41
SPG11-222ENST00000560435 PGRMC1O00264 195 aaKnown RBP0.02□□□□□ -2.41
SPG11-222ENST00000560435 UQCRQO14949 82 aa0.02□□□□□ -2.41
SPG11-222ENST00000560435 IFNA21P01568 189 aa0.02□□□□□ -2.41
SPG11-222ENST00000560435 FABP1P07148 127 aa0.02□□□□□ -2.41
SPG11-222ENST00000560435 NBEAP1P0C6P0 100 aa0.02□□□□□ -2.41
SPG11-222ENST00000560435 EVI2AP22794 236 aa0.02□□□□□ -2.41
SPG11-222ENST00000560435 RPS3P23396 243 aaKnown RBP eCLIP0.02□□□□□ -2.41
SPG11-222ENST00000560435 ETV6P41212 452 aa0.02□□□□□ -2.41
SPG11-222ENST00000560435 QRFPP83859 136 aa0.02□□□□□ -2.41
SPG11-222ENST00000560435 FXYD3Q14802 87 aa0.02□□□□□ -2.41
SPG11-222ENST00000560435 SPINK13Q1W4C9 94 aa0.02□□□□□ -2.41
SPG11-222ENST00000560435 TMEM128Q5BJH2 165 aa0.02□□□□□ -2.41
SPG11-222ENST00000560435 C6orf52Q5T4I8 152 aa0.02□□□□□ -2.41
SPG11-222ENST00000560435 LYPD5Q6UWN5 251 aa0.02□□□□□ -2.41
SPG11-222ENST00000560435 C3orf62Q6ZUJ4 267 aa0.02□□□□□ -2.41
SPG11-222ENST00000560435 CROCCP2Q86T23 111 aa0.02□□□□□ -2.41
SPG11-222ENST00000560435 Q86TA4 180 aa0.02□□□□□ -2.41
SPG11-222ENST00000560435 TEX29Q8N6K0 151 aa0.02□□□□□ -2.41
SPG11-222ENST00000560435 C5orf56Q8N8D9 126 aa0.02□□□□□ -2.41
SPG11-222ENST00000560435 OR5A2Q8NGI9 324 aa0.02□□□□□ -2.41
SPG11-222ENST00000560435 OR5AK2Q8NH90 309 aa0.02□□□□□ -2.41
SPG11-222ENST00000560435 MRPL36Q9P0J6 103 aaKnown RBP0.02□□□□□ -2.41
SPG11-222ENST00000560435 COMMD3Q9UBI1 195 aa0.02□□□□□ -2.41
SPG11-222ENST00000560435 V9GYQ6 96 aa0.02□□□□□ -2.41
SPG11-222ENST00000560435 DSPPQ9NZW4 1301 aa0.02□□□□□ -2.41
SPG11-222ENST00000560435 FGD6Q6ZV73 1430 aa0.02□□□□□ -2.41
SPG11-222ENST00000560435 A2MP01023 1474 aa0.02□□□□□ -2.41
SPG11-222ENST00000560435 ARAP1Q96P48 1450 aa0.02□□□□□ -2.41
SPG11-222ENST00000560435 DLC1Q96QB1 1528 aa0.02□□□□□ -2.41
SPG11-222ENST00000560435 CACNA1EQ15878 2313 aa0.02□□□□□ -2.41
SPG11-222ENST00000560435 WDR97A6NE52 1622 aa0.02□□□□□ -2.41
SPG11-222ENST00000560435 USP54Q70EL1 1684 aa0.02□□□□□ -2.41
SPG11-222ENST00000560435 KIAA1549LQ6ZVL6 1849 aa0.01□□□□□ -2.41
SPG11-222ENST00000560435 ANKRD31Q8N7Z5 1873 aa0.01□□□□□ -2.41
SPG11-222ENST00000560435 CELSR2Q9HCU4 2923 aa0.01□□□□□ -2.41
SPG11-222ENST00000560435 JMJD1CQ15652 2540 aa0.01□□□□□ -2.41
SPG11-222ENST00000560435 LOC107984156A0A0G2JMH3 177 aa0.01□□□□□ -2.41
SPG11-222ENST00000560435 A0A0G2JMM0 328 aa0.01□□□□□ -2.41
SPG11-222ENST00000560435 CXorf51AA0A1B0GTR3 108 aa0.01□□□□□ -2.41
SPG11-222ENST00000560435 A0A1B0GV72 72 aa0.01□□□□□ -2.41
SPG11-222ENST00000560435 LOC101927531A0A1B0GV80 90 aa0.01□□□□□ -2.41
SPG11-222ENST00000560435 TMEM30CPA0ZSE6 113 aa0.01□□□□□ -2.41
SPG11-222ENST00000560435 TMEM189A5PLL7 270 aa0.01□□□□□ -2.41
SPG11-222ENST00000560435 ARL5CA6NH57 179 aa0.01□□□□□ -2.41
SPG11-222ENST00000560435 LY6G6CO95867 125 aa0.01□□□□□ -2.41
SPG11-222ENST00000560435 HBDP02042 147 aa0.01□□□□□ -2.41
SPG11-222ENST00000560435 SLC25A5P05141 298 aaKnown RBP0.01□□□□□ -2.41
SPG11-222ENST00000560435 SCTP09683 121 aa0.01□□□□□ -2.41
SPG11-222ENST00000560435 GTF2A1P52655 376 aaPredicted RBP0.01□□□□□ -2.41
SPG11-222ENST00000560435 B2MP61769 119 aa0.01□□□□□ -2.41
SPG11-222ENST00000560435 LSM3P62310 102 aaKnown RBP0.01□□□□□ -2.41
SPG11-222ENST00000560435 SNRPD3P62318 126 aaKnown RBP0.01□□□□□ -2.41
SPG11-222ENST00000560435 KLKP1Q107X0 134 aa0.01□□□□□ -2.41
SPG11-222ENST00000560435 ZNF56Q15929 161 aa0.01□□□□□ -2.41
SPG11-222ENST00000560435 ARL17AQ8IVW1 177 aa0.01□□□□□ -2.41
SPG11-222ENST00000560435 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.01□□□□□ -2.41
SPG11-222ENST00000560435 TMEM35BQ8NCS4 154 aa0.01□□□□□ -2.41
SPG11-222ENST00000560435 OR51A4Q8NGJ6 313 aa0.01□□□□□ -2.41
SPG11-222ENST00000560435 DMAC1Q96GE9 116 aa0.01□□□□□ -2.41
SPG11-222ENST00000560435 CCDC115Q96NT0 180 aa0.01□□□□□ -2.41
SPG11-222ENST00000560435 AP1S3Q96PC3 154 aa0.01□□□□□ -2.41
SPG11-222ENST00000560435 TRAPPC2LQ9UL33 140 aa0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms