RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 CD14P08571 375 aa1.08□□□□□ -2.24
CASC4-206ENST00000558847 SCGB1A1P11684 91 aa1.08□□□□□ -2.24
CASC4-206ENST00000558847 CCL4P13236 92 aa1.08□□□□□ -2.24
CASC4-206ENST00000558847 GTF2A1P52655 376 aaPredicted RBP1.08□□□□□ -2.24
CASC4-206ENST00000558847 FKBP11Q9NYL4 201 aa1.08□□□□□ -2.24
CASC4-206ENST00000558847 ANKRD30AQ9BXX3 1397 aa1.08□□□□□ -2.24
CASC4-206ENST00000558847 ANKRD31Q8N7Z5 1873 aa1.07□□□□□ -2.24
CASC4-206ENST00000558847 LOC107984156A0A0G2JMH3 177 aa1.07□□□□□ -2.24
CASC4-206ENST00000558847 ZNF727A8MUV8 499 aa1.07□□□□□ -2.24
CASC4-206ENST00000558847 M0QZK8 103 aa1.07□□□□□ -2.24
CASC4-206ENST00000558847 SCTP09683 121 aa1.07□□□□□ -2.24
CASC4-206ENST00000558847 CKS2P33552 79 aa1.07□□□□□ -2.24
CASC4-206ENST00000558847 CCDC153Q494R4 210 aa1.07□□□□□ -2.24
CASC4-206ENST00000558847 Q6ZQY7 126 aa1.07□□□□□ -2.24
CASC4-206ENST00000558847 ARL17AQ8IVW1 177 aa1.07□□□□□ -2.24
CASC4-206ENST00000558847 OR8J3Q8NGG0 315 aa1.07□□□□□ -2.24
CASC4-206ENST00000558847 CASP8AP2Q9UKL3 1982 aa1.07□□□□□ -2.24
CASC4-206ENST00000558847 TRBV30A0A0K0K1B3 111 aa1.06□□□□□ -2.24
CASC4-206ENST00000558847 TMEM189A5PLL7 270 aa1.06□□□□□ -2.24
CASC4-206ENST00000558847 EDF1O60869 148 aaKnown RBP1.06□□□□□ -2.24
CASC4-206ENST00000558847 HIST1H1BP16401 226 aaKnown RBP1.06□□□□□ -2.24
CASC4-206ENST00000558847 PRB3Q04118 309 aaPredicted RBP1.06□□□□□ -2.24
CASC4-206ENST00000558847 ATOH7Q8N100 152 aa1.06□□□□□ -2.24
CASC4-206ENST00000558847 LPAR5Q9H1C0 372 aa1.06□□□□□ -2.24
CASC4-206ENST00000558847 CALML5Q9NZT1 146 aa1.06□□□□□ -2.24
CASC4-206ENST00000558847 FGD6Q6ZV73 1430 aa1.06□□□□□ -2.24
CASC4-206ENST00000558847 PAEPP09466 180 aa1.05□□□□□ -2.24
CASC4-206ENST00000558847 FXYD6P3P58550 94 aa1.05□□□□□ -2.24
CASC4-206ENST00000558847 RPL37AP61513 92 aaKnown RBP1.05□□□□□ -2.24
CASC4-206ENST00000558847 SNRPD3P62318 126 aaKnown RBP1.05□□□□□ -2.24
CASC4-206ENST00000558847 OR8B8Q15620 311 aa1.05□□□□□ -2.24
CASC4-206ENST00000558847 TCTE3Q8IZS6 198 aa1.05□□□□□ -2.24
CASC4-206ENST00000558847 LIMD2Q9BT23 127 aa1.05□□□□□ -2.24
CASC4-206ENST00000558847 DSPPQ9NZW4 1301 aa1.05□□□□□ -2.24
CASC4-206ENST00000558847 ARAP1Q96P48 1450 aa1.05□□□□□ -2.24
CASC4-206ENST00000558847 LAMA4Q16363 1823 aa1.04□□□□□ -2.24
CASC4-206ENST00000558847 IGHV1-24A0A0C4DH33 117 aa1.04□□□□□ -2.24
CASC4-206ENST00000558847 HSD17B12Q53GQ0 312 aa1.04□□□□□ -2.24
CASC4-206ENST00000558847 IDO2Q6ZQW0 420 aa1.04□□□□□ -2.24
CASC4-206ENST00000558847 EML5Q05BV3 1969 aa1.04□□□□□ -2.24
CASC4-206ENST00000558847 PHRF1Q9P1Y6 1649 aaKnown RBP1.04□□□□□ -2.24
CASC4-206ENST00000558847 TET1Q8NFU7 2136 aa1.03□□□□□ -2.24
CASC4-206ENST00000558847 SMIM24O75264 130 aa1.03□□□□□ -2.24
CASC4-206ENST00000558847 SLC25A5P05141 298 aaKnown RBP1.03□□□□□ -2.24
CASC4-206ENST00000558847 CMPK1P30085 196 aa1.03□□□□□ -2.24
CASC4-206ENST00000558847 RHOHQ15669 191 aa1.03□□□□□ -2.24
CASC4-206ENST00000558847 Q6ZS92 163 aa1.03□□□□□ -2.24
CASC4-206ENST00000558847 OR4S1Q8NGB4 309 aa1.03□□□□□ -2.24
CASC4-206ENST00000558847 BATF3Q9NR55 127 aa1.03□□□□□ -2.24
CASC4-206ENST00000558847 MRPL35Q9NZE8 188 aaKnown RBP1.03□□□□□ -2.24
CASC4-206ENST00000558847 METTL1Q9UBP6 276 aaKnown RBP1.03□□□□□ -2.24
CASC4-206ENST00000558847 JPT1Q9UK76 154 aa1.03□□□□□ -2.24
CASC4-206ENST00000558847 TMEM30CPA0ZSE6 113 aa1.02□□□□□ -2.25
CASC4-206ENST00000558847 TNFSF15O95150 251 aa1.02□□□□□ -2.25
CASC4-206ENST00000558847 IGF2P01344 180 aa1.02□□□□□ -2.25
CASC4-206ENST00000558847 TCRAP04437 139 aa1.02□□□□□ -2.25
CASC4-206ENST00000558847 SDC4P31431 198 aa1.02□□□□□ -2.25
CASC4-206ENST00000558847 PCBD1P61457 104 aa1.02□□□□□ -2.25
CASC4-206ENST00000558847 QRFPP83859 136 aa1.02□□□□□ -2.25
CASC4-206ENST00000558847 SPINK9Q5DT21 86 aa1.02□□□□□ -2.25
CASC4-206ENST00000558847 OTOSQ8NHW6 89 aa1.02□□□□□ -2.25
CASC4-206ENST00000558847 ANP32BQ92688 251 aaKnown RBP1.02□□□□□ -2.25
CASC4-206ENST00000558847 UNC13AQ9UPW8 1703 aa1.02□□□□□ -2.25
CASC4-206ENST00000558847 C9JAW5 83 aa1.01□□□□□ -2.25
CASC4-206ENST00000558847 YPEL1O60688 119 aa1.01□□□□□ -2.25
CASC4-206ENST00000558847 XAF1Q6GPH4 301 aa1.01□□□□□ -2.25
CASC4-206ENST00000558847 HIGD1AQ9Y241 93 aa1.01□□□□□ -2.25
CASC4-206ENST00000558847 USP54Q70EL1 1684 aa1□□□□□ -2.25
CASC4-206ENST00000558847 NUPR2A6NF83 97 aa1□□□□□ -2.25
CASC4-206ENST00000558847 K7EIL1 84 aa1□□□□□ -2.25
CASC4-206ENST00000558847 OR2H2O95918 312 aa1□□□□□ -2.25
CASC4-206ENST00000558847 CAV3P56539 151 aa1□□□□□ -2.25
CASC4-206ENST00000558847 PLGLB1Q02325 96 aa1□□□□□ -2.25
CASC4-206ENST00000558847 Q5XG85 94 aa1□□□□□ -2.25
CASC4-206ENST00000558847 DMAC1Q96GE9 116 aa1□□□□□ -2.25
CASC4-206ENST00000558847 CCL19Q99731 98 aa1□□□□□ -2.25
CASC4-206ENST00000558847 MRPL36Q9P0J6 103 aaKnown RBP1□□□□□ -2.25
CASC4-206ENST00000558847 ZGRF1Q86YA3 2104 aa1□□□□□ -2.25
CASC4-206ENST00000558847 FER1L6Q2WGJ9 1857 aa0.99□□□□□ -2.25
CASC4-206ENST00000558847 MUC4Q99102 2169 aa0.99□□□□□ -2.25
CASC4-206ENST00000558847 A0A0G2JMM0 328 aa0.99□□□□□ -2.25
CASC4-206ENST00000558847 HIGD1CA8MV81 97 aa0.99□□□□□ -2.25
CASC4-206ENST00000558847 TPST1O60507 370 aa0.99□□□□□ -2.25
CASC4-206ENST00000558847 MORN2Q502X0 79 aa0.99□□□□□ -2.25
CASC4-206ENST00000558847 TMEM244Q5VVB8 128 aa0.99□□□□□ -2.25
CASC4-206ENST00000558847 CSAG1Q6PB30 78 aa0.99□□□□□ -2.25
CASC4-206ENST00000558847 C10orf99Q6UWK7 81 aa0.99□□□□□ -2.25
CASC4-206ENST00000558847 TMEM91Q6ZNR0 172 aa0.99□□□□□ -2.25
CASC4-206ENST00000558847 VPS25Q9BRG1 176 aa0.99□□□□□ -2.25
CASC4-206ENST00000558847 MT-ND4LP03901 98 aa0.98□□□□□ -2.25
CASC4-206ENST00000558847 HLA-DRB4P13762 266 aa0.98□□□□□ -2.25
CASC4-206ENST00000558847 KDELR1P24390 212 aa0.98□□□□□ -2.25
CASC4-206ENST00000558847 DEFB132Q7Z7B7 95 aa0.98□□□□□ -2.25
CASC4-206ENST00000558847 Q86TA4 180 aa0.98□□□□□ -2.25
CASC4-206ENST00000558847 BANF2Q9H503 90 aa0.98□□□□□ -2.25
CASC4-206ENST00000558847 HLA-DRB4X5D2U9 266 aa0.98□□□□□ -2.25
CASC4-206ENST00000558847 TANC2Q9HCD6 1990 aa0.97□□□□□ -2.25
CASC4-206ENST00000558847 PTPRDP23468 1912 aa0.97□□□□□ -2.25
CASC4-206ENST00000558847 KIAA1549LQ6ZVL6 1849 aa0.97□□□□□ -2.25
CASC4-206ENST00000558847 TRAV2A0A0B4J234 112 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms