RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 K7EIM0 57 aa12.56□□□□□ -0.4
HMBOX1-212ENST00000558662 DEFB108BQ8NET1 73 aa12.56□□□□□ -0.4
HMBOX1-212ENST00000558662 MAFAQ8NHW3 353 aaPredicted RBP12.56□□□□□ -0.4
HMBOX1-212ENST00000558662 MSRB1Q9NZV6 116 aa12.56□□□□□ -0.4
HMBOX1-212ENST00000558662 ENSAO43768 121 aaKnown RBP12.55□□□□□ -0.4
HMBOX1-212ENST00000558662 PPP1R17O96001 155 aa12.55□□□□□ -0.4
HMBOX1-212ENST00000558662 ERCC8Q13216 396 aa12.55□□□□□ -0.4
HMBOX1-212ENST00000558662 IGFBPL1Q8WX77 278 aa12.55□□□□□ -0.4
HMBOX1-212ENST00000558662 COL27A1Q8IZC6 1860 aaPredicted RBP12.55□□□□□ -0.4
HMBOX1-212ENST00000558662 PRUNE2Q8WUY3 3088 aa12.54□□□□□ -0.4
HMBOX1-212ENST00000558662 CACNA1GO43497 2377 aa12.54□□□□□ -0.4
HMBOX1-212ENST00000558662 IGHV3-21A0A0B4J1V1 117 aa12.54□□□□□ -0.4
HMBOX1-212ENST00000558662 FAM240AA0A1B0GVK7 77 aa12.54□□□□□ -0.4
HMBOX1-212ENST00000558662 ZNF80P51504 273 aaPredicted RBP12.54□□□□□ -0.4
HMBOX1-212ENST00000558662 IGKV2-40A0A087WW87 121 aaPredicted RBP12.53□□□□□ -0.4
HMBOX1-212ENST00000558662 CCDC179H3BU77 68 aa12.53□□□□□ -0.4
HMBOX1-212ENST00000558662 H3BVH4 76 aa12.53□□□□□ -0.4
HMBOX1-212ENST00000558662 CNIH1O95406 144 aa12.53□□□□□ -0.4
HMBOX1-212ENST00000558662 IGKV2D-40P01614 121 aaPredicted RBP12.53□□□□□ -0.4
HMBOX1-212ENST00000558662 USP34Q70CQ2 3546 aa12.53□□□□□ -0.4
HMBOX1-212ENST00000558662 IGHV1-69DA0A0B4J2H0 117 aa12.53□□□□□ -0.4
HMBOX1-212ENST00000558662 A0A0J9YY99 117 aa12.53□□□□□ -0.4
HMBOX1-212ENST00000558662 CCL3L1P16619 93 aa12.53□□□□□ -0.4
HMBOX1-212ENST00000558662 TIMD4Q96H15 378 aa12.53□□□□□ -0.4
HMBOX1-212ENST00000558662 TRAV8-4A0A0B4J246 113 aa12.52□□□□□ -0.41
HMBOX1-212ENST00000558662 NDUFB3O43676 98 aa12.52□□□□□ -0.41
HMBOX1-212ENST00000558662 GAS8-AS1O95177 125 aa12.52□□□□□ -0.41
HMBOX1-212ENST00000558662 CFC1BP0CG36 223 aa12.52□□□□□ -0.41
HMBOX1-212ENST00000558662 CFC1P0CG37 223 aa12.52□□□□□ -0.41
HMBOX1-212ENST00000558662 DLX6P56179 175 aa12.52□□□□□ -0.41
HMBOX1-212ENST00000558662 ATXN8Q156A1 80 aa12.52□□□□□ -0.41
HMBOX1-212ENST00000558662 SLC25A29Q8N8R3 303 aa12.52□□□□□ -0.41
HMBOX1-212ENST00000558662 HIF1ANQ9NWT6 349 aa12.52□□□□□ -0.41
HMBOX1-212ENST00000558662 TRAV4A0A0B4J268 109 aa12.51□□□□□ -0.41
HMBOX1-212ENST00000558662 A0A0B4J2C4 111 aa12.51□□□□□ -0.41
HMBOX1-212ENST00000558662 M0R381 172 aa12.51□□□□□ -0.41
HMBOX1-212ENST00000558662 IGHV3-30P01768 117 aa12.51□□□□□ -0.41
HMBOX1-212ENST00000558662 IGHV3-30-5P0DP03 117 aa12.51□□□□□ -0.41
HMBOX1-212ENST00000558662 MFAP4P55083 255 aa12.51□□□□□ -0.41
HMBOX1-212ENST00000558662 C9orf106Q8NAJ2 232 aa12.51□□□□□ -0.41
HMBOX1-212ENST00000558662 GATA1P15976 413 aaPredicted RBP12.51□□□□□ -0.41
HMBOX1-212ENST00000558662 TMEM155Q4W5P6 130 aa12.51□□□□□ -0.41
HMBOX1-212ENST00000558662 KIR2DL4Q99706 377 aa12.51□□□□□ -0.41
HMBOX1-212ENST00000558662 ONECUT1Q9UBC0 465 aa12.51□□□□□ -0.41
HMBOX1-212ENST00000558662 EFNA4P52798 201 aa12.5□□□□□ -0.41
HMBOX1-212ENST00000558662 BAALCQ8WXS3 180 aa12.5□□□□□ -0.41
HMBOX1-212ENST00000558662 VKORC1Q9BQB6 163 aa12.5□□□□□ -0.41
HMBOX1-212ENST00000558662 YAE1D1Q9NRH1 226 aa12.5□□□□□ -0.41
HMBOX1-212ENST00000558662 C9JAW5 83 aa12.49□□□□□ -0.41
HMBOX1-212ENST00000558662 M0R1B8 84 aa12.49□□□□□ -0.41
HMBOX1-212ENST00000558662 IGHV1-8P0DP01 117 aa12.49□□□□□ -0.41
HMBOX1-212ENST00000558662 Q8N1Y9 231 aa12.49□□□□□ -0.41
HMBOX1-212ENST00000558662 MRPL53Q96EL3 112 aaKnown RBP12.49□□□□□ -0.41
HMBOX1-212ENST00000558662 IMUPQ9GZP8 106 aa12.49□□□□□ -0.41
HMBOX1-212ENST00000558662 KAAG1Q9UBP8 84 aa12.49□□□□□ -0.41
HMBOX1-212ENST00000558662 INTS1Q8N201 2190 aaKnown RBP12.49□□□□□ -0.41
HMBOX1-212ENST00000558662 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.48□□□□□ -0.41
HMBOX1-212ENST00000558662 CFIP05156 583 aa12.48□□□□□ -0.41
HMBOX1-212ENST00000558662 HES1Q14469 280 aa12.48□□□□□ -0.41
HMBOX1-212ENST00000558662 MEIG1Q5JSS6 88 aa12.48□□□□□ -0.41
HMBOX1-212ENST00000558662 FAM159AQ6UWV7 190 aa12.48□□□□□ -0.41
HMBOX1-212ENST00000558662 RASL10AQ92737 203 aa12.48□□□□□ -0.41
HMBOX1-212ENST00000558662 SIT1Q9Y3P8 196 aa12.48□□□□□ -0.41
HMBOX1-212ENST00000558662 SUMO2P61956 95 aaKnown RBP12.48□□□□□ -0.41
HMBOX1-212ENST00000558662 NUP37Q8NFH4 326 aa12.48□□□□□ -0.41
HMBOX1-212ENST00000558662 PLEKHB2Q96CS7 222 aa12.48□□□□□ -0.41
HMBOX1-212ENST00000558662 IGHV1-3A0A0C4DH29 117 aa12.47□□□□□ -0.41
HMBOX1-212ENST00000558662 TRBV10-2A0A0K0K1G8 114 aa12.47□□□□□ -0.41
HMBOX1-212ENST00000558662 PRTN3P24158 256 aa12.47□□□□□ -0.41
HMBOX1-212ENST00000558662 C15orf53Q8NAA6 179 aa12.47□□□□□ -0.41
HMBOX1-212ENST00000558662 ODF3Q96PU9 254 aa12.47□□□□□ -0.41
HMBOX1-212ENST00000558662 FAM186AA6NE01 2351 aa12.46□□□□□ -0.41
HMBOX1-212ENST00000558662 TRBV7-7A0A0K0K1E9 115 aa12.46□□□□□ -0.41
HMBOX1-212ENST00000558662 C11orf86A6NJI1 115 aa12.46□□□□□ -0.41
HMBOX1-212ENST00000558662 Q8TAT8 98 aa12.46□□□□□ -0.41
HMBOX1-212ENST00000558662 TRAV2A0A0B4J234 112 aa12.46□□□□□ -0.42
HMBOX1-212ENST00000558662 IGHV7-4-1A0A0J9YVY3 117 aa12.46□□□□□ -0.42
HMBOX1-212ENST00000558662 H3BT86 120 aa12.46□□□□□ -0.42
HMBOX1-212ENST00000558662 LGALS9O00182 355 aa12.46□□□□□ -0.42
HMBOX1-212ENST00000558662 IGHV3-33P01772 117 aa12.46□□□□□ -0.42
HMBOX1-212ENST00000558662 LINC01620Q4KN68 170 aa12.46□□□□□ -0.42
HMBOX1-212ENST00000558662 C2orf66Q6UXQ4 117 aa12.46□□□□□ -0.42
HMBOX1-212ENST00000558662 TMEM141Q96I45 108 aa12.46□□□□□ -0.42
HMBOX1-212ENST00000558662 H3BMM0 161 aa12.45□□□□□ -0.42
HMBOX1-212ENST00000558662 IGLV1-47P01700 117 aa12.45□□□□□ -0.42
HMBOX1-212ENST00000558662 TRGV3P03979 118 aa12.45□□□□□ -0.42
HMBOX1-212ENST00000558662 ATP5G1P05496 136 aa12.45□□□□□ -0.42
HMBOX1-212ENST00000558662 DEFB121Q5J5C9 76 aa12.45□□□□□ -0.42
HMBOX1-212ENST00000558662 SPANXN1Q5VSR9 72 aa12.45□□□□□ -0.42
HMBOX1-212ENST00000558662 GFRALQ6UXV0 394 aa12.45□□□□□ -0.42
HMBOX1-212ENST00000558662 FAM57AQ8TBR7 257 aa12.45□□□□□ -0.42
HMBOX1-212ENST00000558662 UBE2WQ96B02 151 aa12.45□□□□□ -0.42
HMBOX1-212ENST00000558662 VPREB3Q9UKI3 123 aa12.45□□□□□ -0.42
HMBOX1-212ENST00000558662 SDK1Q7Z5N4 2213 aa12.44□□□□□ -0.42
HMBOX1-212ENST00000558662 IGKV3D-20A0A0C4DH25 116 aa12.44□□□□□ -0.42
HMBOX1-212ENST00000558662 TRBV30A0A0K0K1B3 111 aa12.44□□□□□ -0.42
HMBOX1-212ENST00000558662 BRI3O95415 125 aa12.44□□□□□ -0.42
HMBOX1-212ENST00000558662 MED14OSP0DP75 135 aa12.44□□□□□ -0.42
HMBOX1-212ENST00000558662 NTN5Q8WTR8 489 aaPredicted RBP12.44□□□□□ -0.42
HMBOX1-212ENST00000558662 CFHR4Q92496 578 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms