RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 NACAE9PAV3 2078 aa12.09□□□□□ -0.47
AP4E1-202ENST00000558439 DSCAML1Q8TD84 2053 aa12.09□□□□□ -0.47
AP4E1-202ENST00000558439 TNRC6BQ9UPQ9 1833 aaKnown RBP12.08□□□□□ -0.47
AP4E1-202ENST00000558439 PRAC2D3DTV9 90 aa12.08□□□□□ -0.47
AP4E1-202ENST00000558439 CD7P09564 240 aa12.08□□□□□ -0.47
AP4E1-202ENST00000558439 COTL1Q14019 142 aa12.08□□□□□ -0.47
AP4E1-202ENST00000558439 TRAV21A0A0B4J279 112 aa12.08□□□□□ -0.48
AP4E1-202ENST00000558439 PAX1P15863 534 aa12.08□□□□□ -0.48
AP4E1-202ENST00000558439 HERVK_113P61574 105 aa12.08□□□□□ -0.48
AP4E1-202ENST00000558439 C8orf86Q6ZUL3 223 aa12.08□□□□□ -0.48
AP4E1-202ENST00000558439 TRBV7-1A0A0A6YYK4 115 aa12.08□□□□□ -0.48
AP4E1-202ENST00000558439 A0A0G2JLM5 398 aa12.08□□□□□ -0.48
AP4E1-202ENST00000558439 SRSF1Q07955 248 aaKnown RBP eCLIP12.08□□□□□ -0.48
AP4E1-202ENST00000558439 TMEM170BQ5T4T1 132 aa12.07□□□□□ -0.48
AP4E1-202ENST00000558439 Q71RC1 249 aaPredicted RBP12.07□□□□□ -0.48
AP4E1-202ENST00000558439 OR1N2Q8NGR9 330 aa12.07□□□□□ -0.48
AP4E1-202ENST00000558439 AGPAT4-IT1Q9H0P7 198 aa12.07□□□□□ -0.48
AP4E1-202ENST00000558439 DKK2Q9UBU2 259 aa12.07□□□□□ -0.48
AP4E1-202ENST00000558439 H7C2G1 150 aa12.07□□□□□ -0.48
AP4E1-202ENST00000558439 ARL6IP6Q8N6S5 226 aa12.07□□□□□ -0.48
AP4E1-202ENST00000558439 OR4X2Q8NGF9 303 aa12.07□□□□□ -0.48
AP4E1-202ENST00000558439 JMJD8Q96S16 334 aa12.07□□□□□ -0.48
AP4E1-202ENST00000558439 OVOL3O00110 214 aa12.07□□□□□ -0.48
AP4E1-202ENST00000558439 NPBQ8NG41 125 aa12.07□□□□□ -0.48
AP4E1-202ENST00000558439 OR2K2Q8NGT1 345 aa12.07□□□□□ -0.48
AP4E1-202ENST00000558439 KIR2DL4Q99706 377 aa12.07□□□□□ -0.48
AP4E1-202ENST00000558439 ZNF688P0C7X2 276 aa12.06□□□□□ -0.48
AP4E1-202ENST00000558439 LAGE3Q14657 143 aa12.06□□□□□ -0.48
AP4E1-202ENST00000558439 CRYGBP07316 175 aa12.06□□□□□ -0.48
AP4E1-202ENST00000558439 MYCNOSP40205 109 aa12.06□□□□□ -0.48
AP4E1-202ENST00000558439 LOXL1Q08397 574 aaPredicted RBP12.06□□□□□ -0.48
AP4E1-202ENST00000558439 MAPK1IP1LQ8NDC0 245 aa12.06□□□□□ -0.48
AP4E1-202ENST00000558439 DTX2Q86UW9 622 aa12.06□□□□□ -0.48
AP4E1-202ENST00000558439 Q8N9W7 124 aa12.06□□□□□ -0.48
AP4E1-202ENST00000558439 SEC11AP67812 179 aa12.05□□□□□ -0.48
AP4E1-202ENST00000558439 BVES-AS1Q5T3Y7 98 aa12.05□□□□□ -0.48
AP4E1-202ENST00000558439 DUX5Q96PT3 197 aa12.05□□□□□ -0.48
AP4E1-202ENST00000558439 IGHV3OR16-12A0A075B7B8 117 aa12.05□□□□□ -0.48
AP4E1-202ENST00000558439 HSD52Q0P140 79 aa12.05□□□□□ -0.48
AP4E1-202ENST00000558439 FOXE3Q13461 319 aa12.05□□□□□ -0.48
AP4E1-202ENST00000558439 CDSNQ15517 529 aa12.05□□□□□ -0.48
AP4E1-202ENST00000558439 RHPN1-AS1Q9BWJ2 59 aa12.05□□□□□ -0.48
AP4E1-202ENST00000558439 ZFYVE26Q68DK2 2539 aa12.05□□□□□ -0.48
AP4E1-202ENST00000558439 CCL25O15444 150 aa12.05□□□□□ -0.48
AP4E1-202ENST00000558439 KIR3DS1Q14943 382 aa12.05□□□□□ -0.48
AP4E1-202ENST00000558439 LINC01548A6NM66 108 aa12.04□□□□□ -0.48
AP4E1-202ENST00000558439 EMP1P54849 157 aa12.04□□□□□ -0.48
AP4E1-202ENST00000558439 DEFB1P60022 68 aa12.04□□□□□ -0.48
AP4E1-202ENST00000558439 CFHR4Q92496 578 aa12.04□□□□□ -0.48
AP4E1-202ENST00000558439 WI2-2373I1.2A0A1W2PRP0 233 aa12.04□□□□□ -0.48
AP4E1-202ENST00000558439 F6UB75 175 aa12.04□□□□□ -0.48
AP4E1-202ENST00000558439 SMAD7O15105 426 aaKnown RBP12.04□□□□□ -0.48
AP4E1-202ENST00000558439 ANKRD39Q53RE8 183 aa12.04□□□□□ -0.48
AP4E1-202ENST00000558439 CD5LO43866 347 aa12.04□□□□□ -0.48
AP4E1-202ENST00000558439 COX8AP10176 69 aa12.04□□□□□ -0.48
AP4E1-202ENST00000558439 SNRPD3P62318 126 aaKnown RBP12.04□□□□□ -0.48
AP4E1-202ENST00000558439 PSMB2P49721 201 aa12.04□□□□□ -0.48
AP4E1-202ENST00000558439 PSMG4Q5JS54 123 aa12.04□□□□□ -0.48
AP4E1-202ENST00000558439 DGAT2L7PQ6IED9 249 aa12.04□□□□□ -0.48
AP4E1-202ENST00000558439 C9orf139Q6ZV77 190 aa12.04□□□□□ -0.48
AP4E1-202ENST00000558439 TRAV12-3A0A0B4J271 114 aa12.03□□□□□ -0.48
AP4E1-202ENST00000558439 ZNF80P51504 273 aaPredicted RBP12.03□□□□□ -0.48
AP4E1-202ENST00000558439 GAGE1Q13065 139 aa12.03□□□□□ -0.48
AP4E1-202ENST00000558439 CD300EQ496F6 205 aaPredicted RBP12.03□□□□□ -0.48
AP4E1-202ENST00000558439 PCP2Q8IVA1 136 aa12.03□□□□□ -0.48
AP4E1-202ENST00000558439 TMEM8BA6NDV4 472 aa12.03□□□□□ -0.48
AP4E1-202ENST00000558439 APOMO95445 188 aa12.03□□□□□ -0.48
AP4E1-202ENST00000558439 OR9G4Q8NGQ1 327 aa12.03□□□□□ -0.48
AP4E1-202ENST00000558439 GAGE12BA1L429 117 aa12.02□□□□□ -0.48
AP4E1-202ENST00000558439 CRIP1P50238 77 aa12.02□□□□□ -0.48
AP4E1-202ENST00000558439 DYNLRB2Q8TF09 96 aa12.02□□□□□ -0.48
AP4E1-202ENST00000558439 TTTY13Q9BZ97 58 aa12.02□□□□□ -0.49
AP4E1-202ENST00000558439 A0A087WWL8 130 aa12.02□□□□□ -0.49
AP4E1-202ENST00000558439 OVOL1O14753 267 aa12.02□□□□□ -0.49
AP4E1-202ENST00000558439 POLQO75417 2590 aa12.02□□□□□ -0.49
AP4E1-202ENST00000558439 CENPVL3A0A0U1RRI6 287 aa12.01□□□□□ -0.49
AP4E1-202ENST00000558439 BUB3O43684 328 aa12.01□□□□□ -0.49
AP4E1-202ENST00000558439 PRSS2P07478 247 aa12.01□□□□□ -0.49
AP4E1-202ENST00000558439 CTRLP40313 264 aa12.01□□□□□ -0.49
AP4E1-202ENST00000558439 SYT8Q8NBV8 401 aa12.01□□□□□ -0.49
AP4E1-202ENST00000558439 CHTOPQ9Y3Y2 248 aaKnown RBP12.01□□□□□ -0.49
AP4E1-202ENST00000558439 TNFRSF13BO14836 293 aaPredicted RBP12.01□□□□□ -0.49
AP4E1-202ENST00000558439 NEGR1Q7Z3B1 354 aa12.01□□□□□ -0.49
AP4E1-202ENST00000558439 MEGF9Q9H1U4 602 aa12.01□□□□□ -0.49
AP4E1-202ENST00000558439 RAI1Q7Z5J4 1906 aaPredicted RBP12.01□□□□□ -0.49
AP4E1-202ENST00000558439 IGHV1-69DA0A0B4J2H0 117 aa12□□□□□ -0.49
AP4E1-202ENST00000558439 IGHV1-69P01742 117 aa12□□□□□ -0.49
AP4E1-202ENST00000558439 C1orf122Q6ZSJ8 110 aa12□□□□□ -0.49
AP4E1-202ENST00000558439 RIPPLY3P57055 190 aa12□□□□□ -0.49
AP4E1-202ENST00000558439 LINC00477Q96M19 166 aa12□□□□□ -0.49
AP4E1-202ENST00000558439 IGLV2-11P01706 119 aa12□□□□□ -0.49
AP4E1-202ENST00000558439 SAMD5Q5TGI4 173 aa12□□□□□ -0.49
AP4E1-202ENST00000558439 LGALS9BQ3B8N2 356 aa12□□□□□ -0.49
AP4E1-202ENST00000558439 LGALS9CQ6DKI2 356 aa12□□□□□ -0.49
AP4E1-202ENST00000558439 LY6G5BQ8NDX9 201 aa12□□□□□ -0.49
AP4E1-202ENST00000558439 TMEM190Q8WZ59 177 aa12□□□□□ -0.49
AP4E1-202ENST00000558439 CYSLTR1Q9Y271 337 aa12□□□□□ -0.49
AP4E1-202ENST00000558439 LY6LH3BQJ8 138 aa11.99□□□□□ -0.49
AP4E1-202ENST00000558439 LINC01545Q5VT33 79 aa11.99□□□□□ -0.49
AP4E1-202ENST00000558439 ABCA2Q9BZC7 2435 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms