RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 FOXI2Q6ZQN5 318 aa0.86□□□□□ -2.27
GPHN-216ENST00000557678 LINC00269Q8N2A0 174 aa0.86□□□□□ -2.27
GPHN-216ENST00000557678 OR10AC1Q8NH08 325 aa0.86□□□□□ -2.27
GPHN-216ENST00000557678 Q8TAT8 98 aa0.86□□□□□ -2.27
GPHN-216ENST00000557678 PSMF1Q92530 271 aa0.86□□□□□ -2.27
GPHN-216ENST00000557678 LINC00526Q96FQ7 95 aa0.86□□□□□ -2.27
GPHN-216ENST00000557678 SMIM7Q9BQ49 75 aa0.86□□□□□ -2.27
GPHN-216ENST00000557678 FAM107BQ9H098 131 aa0.86□□□□□ -2.27
GPHN-216ENST00000557678 CDC42SE1Q9NRR8 79 aa0.86□□□□□ -2.27
GPHN-216ENST00000557678 TMEM14CQ9P0S9 112 aa0.86□□□□□ -2.27
GPHN-216ENST00000557678 HLA-DRB4X5D2U9 266 aa0.86□□□□□ -2.27
GPHN-216ENST00000557678 SDK1Q7Z5N4 2213 aa0.86□□□□□ -2.27
GPHN-216ENST00000557678 UHRF1BP1LA0JNW5 1464 aa0.86□□□□□ -2.27
GPHN-216ENST00000557678 NINQ8N4C6 2090 aa0.85□□□□□ -2.27
GPHN-216ENST00000557678 MCM3APO60318 1980 aa0.85□□□□□ -2.27
GPHN-216ENST00000557678 TRBV6-7A0A0A0MS04 114 aa0.85□□□□□ -2.27
GPHN-216ENST00000557678 A0A1B0GW64 132 aa0.85□□□□□ -2.27
GPHN-216ENST00000557678 EFCAB10A6NFE3 127 aa0.85□□□□□ -2.27
GPHN-216ENST00000557678 BBIP1A8MTZ0 92 aa0.85□□□□□ -2.27
GPHN-216ENST00000557678 MT-ND4LP03901 98 aa0.85□□□□□ -2.27
GPHN-216ENST00000557678 SLC25A5P05141 298 aaKnown RBP0.85□□□□□ -2.27
GPHN-216ENST00000557678 TSPAN19P0C672 248 aa0.85□□□□□ -2.27
GPHN-216ENST00000557678 SLC25A4P12235 298 aa0.85□□□□□ -2.27
GPHN-216ENST00000557678 ANK1P16157 1881 aa0.85□□□□□ -2.27
GPHN-216ENST00000557678 KDELR1P24390 212 aa0.85□□□□□ -2.27
GPHN-216ENST00000557678 AKR1D1P51857 326 aa0.85□□□□□ -2.27
GPHN-216ENST00000557678 BLCAPP62952 87 aa0.85□□□□□ -2.27
GPHN-216ENST00000557678 PLGLB1Q02325 96 aa0.85□□□□□ -2.27
GPHN-216ENST00000557678 ARHGAP31Q2M1Z3 1444 aa0.85□□□□□ -2.27
GPHN-216ENST00000557678 GDF5OSQ5U4N7 250 aa0.85□□□□□ -2.27
GPHN-216ENST00000557678 IZUMO2Q6UXV1 221 aa0.85□□□□□ -2.27
GPHN-216ENST00000557678 TMEM91Q6ZNR0 172 aa0.85□□□□□ -2.27
GPHN-216ENST00000557678 OR8J3Q8NGG0 315 aa0.85□□□□□ -2.27
GPHN-216ENST00000557678 C1orf54Q8WWF1 131 aa0.85□□□□□ -2.27
GPHN-216ENST00000557678 PRG4Q92954 1404 aaPredicted RBP0.85□□□□□ -2.27
GPHN-216ENST00000557678 NABP2Q9BQ15 211 aa0.85□□□□□ -2.27
GPHN-216ENST00000557678 SMIM3Q9BZL3 60 aa0.85□□□□□ -2.27
GPHN-216ENST00000557678 SLC35B3Q9H1N7 401 aa0.85□□□□□ -2.27
GPHN-216ENST00000557678 NIT2Q9NQR4 276 aa0.85□□□□□ -2.27
GPHN-216ENST00000557678 TNFSF18Q9UNG2 199 aa0.85□□□□□ -2.27
GPHN-216ENST00000557678 MYH13Q9UKX3 1938 aa0.85□□□□□ -2.27
GPHN-216ENST00000557678 WDR97A6NE52 1622 aa0.85□□□□□ -2.27
GPHN-216ENST00000557678 PTPRDP23468 1912 aa0.84□□□□□ -2.27
GPHN-216ENST00000557678 SOGA1O94964 1423 aa0.84□□□□□ -2.27
GPHN-216ENST00000557678 ERBINQ96RT1 1412 aa0.84□□□□□ -2.27
GPHN-216ENST00000557678 TRAV2A0A0B4J234 112 aa0.84□□□□□ -2.27
GPHN-216ENST00000557678 IGHV1-24A0A0C4DH33 117 aa0.84□□□□□ -2.27
GPHN-216ENST00000557678 ZNF727A8MUV8 499 aa0.84□□□□□ -2.27
GPHN-216ENST00000557678 TPST1O60507 370 aa0.84□□□□□ -2.27
GPHN-216ENST00000557678 EDF1O60869 148 aaKnown RBP0.84□□□□□ -2.27
GPHN-216ENST00000557678 SNRPD3P62318 126 aaKnown RBP0.84□□□□□ -2.27
GPHN-216ENST00000557678 HIST1H1AQ02539 215 aaPredicted RBP0.84□□□□□ -2.27
GPHN-216ENST00000557678 MIR22HGQ0VDD5 57 aa0.84□□□□□ -2.27
GPHN-216ENST00000557678 LINC00322Q6ZN03 302 aaPredicted RBP0.84□□□□□ -2.27
GPHN-216ENST00000557678 C3orf62Q6ZUJ4 267 aa0.84□□□□□ -2.27
GPHN-216ENST00000557678 CTAGE3PQ8IX95 158 aa0.84□□□□□ -2.27
GPHN-216ENST00000557678 ATOH7Q8N100 152 aa0.84□□□□□ -2.27
GPHN-216ENST00000557678 C10orf111Q8N326 155 aa0.84□□□□□ -2.27
GPHN-216ENST00000557678 TCTEX1D1Q8N7M0 179 aa0.84□□□□□ -2.27
GPHN-216ENST00000557678 PLPP5Q8NEB5 264 aa0.84□□□□□ -2.27
GPHN-216ENST00000557678 OTOSQ8NHW6 89 aa0.84□□□□□ -2.27
GPHN-216ENST00000557678 FKBP11Q9NYL4 201 aa0.84□□□□□ -2.27
GPHN-216ENST00000557678 UNC13CQ8NB66 2214 aa0.84□□□□□ -2.28
GPHN-216ENST00000557678 PEAK1Q9H792 1746 aa0.84□□□□□ -2.28
GPHN-216ENST00000557678 MYH6P13533 1939 aa0.83□□□□□ -2.28
GPHN-216ENST00000557678 HELZP42694 1942 aaKnown RBP0.83□□□□□ -2.28
GPHN-216ENST00000557678 PEG3Q9GZU2 1588 aa0.83□□□□□ -2.28
GPHN-216ENST00000557678 BICRAQ9NZM4 1560 aa0.83□□□□□ -2.28
GPHN-216ENST00000557678 FGD6Q6ZV73 1430 aa0.83□□□□□ -2.28
GPHN-216ENST00000557678 JMJD7-PLA2G4BH0Y9G9 81 aa0.83□□□□□ -2.28
GPHN-216ENST00000557678 DNAL4O96015 105 aa0.83□□□□□ -2.28
GPHN-216ENST00000557678 NEDD8Q15843 81 aa0.83□□□□□ -2.28
GPHN-216ENST00000557678 GLYATL3Q5SZD4 288 aa0.83□□□□□ -2.28
GPHN-216ENST00000557678 FAM19A2Q8N3H0 131 aa0.83□□□□□ -2.28
GPHN-216ENST00000557678 C15orf53Q8NAA6 179 aa0.83□□□□□ -2.28
GPHN-216ENST00000557678 TSTD1Q8NFU3 115 aa0.83□□□□□ -2.28
GPHN-216ENST00000557678 C10orf105Q8TEF2 133 aa0.83□□□□□ -2.28
GPHN-216ENST00000557678 VPS25Q9BRG1 176 aa0.83□□□□□ -2.28
GPHN-216ENST00000557678 SAR1AQ9NR31 198 aa0.83□□□□□ -2.28
GPHN-216ENST00000557678 TAS2R8Q9NYW2 309 aa0.83□□□□□ -2.28
GPHN-216ENST00000557678 COMMD3Q9UBI1 195 aa0.83□□□□□ -2.28
GPHN-216ENST00000557678 CCDC171Q6TFL3 1326 aa0.83□□□□□ -2.28
GPHN-216ENST00000557678 MYH9P35579 1960 aaKnown RBP0.83□□□□□ -2.28
GPHN-216ENST00000557678 MYOM3Q5VTT5 1437 aa0.82□□□□□ -2.28
GPHN-216ENST00000557678 WDR7Q9Y4E6 1490 aa0.82□□□□□ -2.28
GPHN-216ENST00000557678 TRBV20-1A0A075B6N2 111 aa0.82□□□□□ -2.28
GPHN-216ENST00000557678 LOC107984156A0A0G2JMH3 177 aa0.82□□□□□ -2.28
GPHN-216ENST00000557678 A0A0J9YY99 117 aa0.82□□□□□ -2.28
GPHN-216ENST00000557678 A0A1W2PPB8 328 aa0.82□□□□□ -2.28
GPHN-216ENST00000557678 A0A1W2PRS3 328 aa0.82□□□□□ -2.28
GPHN-216ENST00000557678 KIR3DP1A8MWS1 328 aa0.82□□□□□ -2.28
GPHN-216ENST00000557678 K7ERU9 68 aa0.82□□□□□ -2.28
GPHN-216ENST00000557678 CDC42EP2O14613 210 aa0.82□□□□□ -2.28
GPHN-216ENST00000557678 CCL25O15444 150 aa0.82□□□□□ -2.28
GPHN-216ENST00000557678 NDUFA2O43678 99 aa0.82□□□□□ -2.28
GPHN-216ENST00000557678 PPYP01298 95 aa0.82□□□□□ -2.28
GPHN-216ENST00000557678 CD3DP04234 171 aa0.82□□□□□ -2.28
GPHN-216ENST00000557678 IGLC6P0CF74 106 aa0.82□□□□□ -2.28
GPHN-216ENST00000557678 RPS25P62851 125 aaKnown RBP0.82□□□□□ -2.28
GPHN-216ENST00000557678 IDO2Q6ZQW0 420 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms