RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 MMDQ15546 238 aa2.02□□□□□ -2.09
VRK1-207ENST00000557352 DEFB116Q30KQ4 102 aa2.02□□□□□ -2.09
VRK1-207ENST00000557352 ACOT6Q3I5F7 207 aaPredicted RBP2.02□□□□□ -2.09
VRK1-207ENST00000557352 AKIRIN2Q53H80 203 aa2.02□□□□□ -2.09
VRK1-207ENST00000557352 C10orf91Q5T1B1 145 aa2.02□□□□□ -2.09
VRK1-207ENST00000557352 AKR1C8PQ5T2L2 129 aa2.02□□□□□ -2.09
VRK1-207ENST00000557352 LCN12Q6JVE5 192 aa2.02□□□□□ -2.09
VRK1-207ENST00000557352 SSX9Q7RTT3 188 aa2.02□□□□□ -2.09
VRK1-207ENST00000557352 VKORC1L1Q8N0U8 176 aa2.02□□□□□ -2.09
VRK1-207ENST00000557352 DYNAPQ8N1N2 210 aa2.02□□□□□ -2.09
VRK1-207ENST00000557352 C5orf56Q8N8D9 126 aa2.02□□□□□ -2.09
VRK1-207ENST00000557352 ZNF709Q8N972 641 aa2.02□□□□□ -2.09
VRK1-207ENST00000557352 HSD17B11Q8NBQ5 300 aa2.02□□□□□ -2.09
VRK1-207ENST00000557352 OR10G4Q8NGN3 311 aa2.02□□□□□ -2.09
VRK1-207ENST00000557352 OR4X1Q8NH49 305 aa2.02□□□□□ -2.09
VRK1-207ENST00000557352 SGMS2Q8NHU3 365 aa2.02□□□□□ -2.09
VRK1-207ENST00000557352 PIFOQ8TCI5 191 aa2.02□□□□□ -2.09
VRK1-207ENST00000557352 SCGB1C1Q8TD33 95 aa2.02□□□□□ -2.09
VRK1-207ENST00000557352 C22orf15Q8WYQ4 148 aa2.02□□□□□ -2.09
VRK1-207ENST00000557352 FAM210AQ96ND0 272 aa2.02□□□□□ -2.09
VRK1-207ENST00000557352 TRGV9Q99603 122 aa2.02□□□□□ -2.09
VRK1-207ENST00000557352 TCEAL7Q9BRU2 100 aa2.02□□□□□ -2.09
VRK1-207ENST00000557352 PBDC1Q9BVG4 233 aa2.02□□□□□ -2.09
VRK1-207ENST00000557352 GGTLC1Q9BX51 225 aa2.02□□□□□ -2.09
VRK1-207ENST00000557352 MRPL32Q9BYC8 188 aaKnown RBP2.02□□□□□ -2.09
VRK1-207ENST00000557352 METTL1Q9UBP6 276 aaKnown RBP2.02□□□□□ -2.09
VRK1-207ENST00000557352 HILPDAQ9Y5L2 63 aa2.02□□□□□ -2.09
VRK1-207ENST00000557352 SVEP1Q4LDE5 3571 aa2.02□□□□□ -2.09
VRK1-207ENST00000557352 CSMD1Q96PZ7 3565 aa2.02□□□□□ -2.09
VRK1-207ENST00000557352 IGLV11-55A0A075B6I3 123 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 IGKV1D-37A0A075B6S9 117 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 IGKV1OR2-108A0A075B7D4 117 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 A0A0G2JLM5 398 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 TCRBV4S1A1TA0A5B7 111 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 SMCO3A2RU48 225 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 FAM223BA6NKX1 122 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 E7EUB6 86 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 TMEM250H0YL14 139 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 CLDN34H7C241 214 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 I3L2K1 104 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 K7EIM0 57 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 CD5LO43866 347 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 MT-CO2P00403 227 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 FABP1P07148 127 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 OR5G3P0C626 314 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 STAG3L2P0CL84 134 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 STAG3L3P0CL85 134 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 OR13C7P0DN81 318 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 FGF7P21781 194 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 CNTFRP26992 372 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 S100A7P31151 101 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 PSMB3P49720 205 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 RAB9AP51151 201 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 KRTAP12-4P60329 112 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 YPEL3P61236 119 aaPredicted RBP2.01□□□□□ -2.09
VRK1-207ENST00000557352 B2MP61769 119 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 RUNX1Q01196 453 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 FXYD3Q14802 87 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 TNXAQ16473 311 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 TMEM183BQ1AE95 376 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 C5orf47Q569G3 176 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 KHDC3LQ587J8 217 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 FAM74A1Q5RGS3 127 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 SPNS3Q6ZMD2 512 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 SLC16A13Q7RTY0 426 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 S100A7AQ86SG5 101 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 COMMD7Q86VX2 200 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 FAM223AQ8IWN6 122 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 TMEM183AQ8IXX5 376 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 Q8N2B8 174 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 RPP25LQ8N5L8 163 aaKnown RBP2.01□□□□□ -2.09
VRK1-207ENST00000557352 NECAP1Q8NC96 275 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 BPIFCQ8NFQ6 507 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 OR10W1Q8NGF6 305 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 C17orf50Q8WW18 174 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 NRGNQ92686 78 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 PFDN5Q99471 154 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 MGST2Q99735 147 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 RSG1Q9BU20 258 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 SEC11CQ9BY50 192 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 SMIM3Q9BZL3 60 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 NKX6-2Q9C056 277 aaPredicted RBP2.01□□□□□ -2.09
VRK1-207ENST00000557352 ACTR3CQ9C0K3 210 aaPredicted RBP2.01□□□□□ -2.09
VRK1-207ENST00000557352 SH3BGRL3Q9H299 93 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 FBXL15Q9H469 300 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 MANBALQ9NQG1 85 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 RPRMQ9NS64 109 aa2.01□□□□□ -2.09
VRK1-207ENST00000557352 CARHSP1Q9Y2V2 147 aaKnown RBP2.01□□□□□ -2.09
VRK1-207ENST00000557352 TEP1Q99973 2627 aaKnown RBP2.01□□□□□ -2.09
VRK1-207ENST00000557352 TRBV7-1A0A0A6YYK4 115 aa2□□□□□ -2.09
VRK1-207ENST00000557352 IGHV3-72A0A0B4J1Y9 119 aa2□□□□□ -2.09
VRK1-207ENST00000557352 TMEM218A2RU14 115 aa2□□□□□ -2.09
VRK1-207ENST00000557352 MAP1LC3B2A6NCE7 125 aa2□□□□□ -2.09
VRK1-207ENST00000557352 NCBP2LA6PVI3 153 aaKnown RBP2□□□□□ -2.09
VRK1-207ENST00000557352 H3BUX3 64 aa2□□□□□ -2.09
VRK1-207ENST00000557352 HMGB3O15347 200 aaKnown RBP2□□□□□ -2.09
VRK1-207ENST00000557352 YIF1AO95070 293 aa2□□□□□ -2.09
VRK1-207ENST00000557352 CNIH1O95406 144 aa2□□□□□ -2.09
VRK1-207ENST00000557352 CXorf1O96002 111 aa2□□□□□ -2.09
VRK1-207ENST00000557352 IFNA1P01562 189 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms