RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 SMCO4Q9NRQ5 59 aa17.62■□□□□ 0.41
SIX4-203ENST00000556952 HLA-DRB4X5D2U9 266 aa17.62■□□□□ 0.41
SIX4-203ENST00000556952 C19orf71A6NCJ1 209 aa17.61■□□□□ 0.41
SIX4-203ENST00000556952 CXorf65A6NEN9 183 aa17.61■□□□□ 0.41
SIX4-203ENST00000556952 WIPF1O43516 503 aa17.61■□□□□ 0.41
SIX4-203ENST00000556952 DAZAP1Q96EP5 407 aaKnown RBP17.61■□□□□ 0.41
SIX4-203ENST00000556952 CRISP2P16562 243 aa17.6■□□□□ 0.41
SIX4-203ENST00000556952 FAM162BQ5T6X4 162 aa17.6■□□□□ 0.41
SIX4-203ENST00000556952 SAMD5Q5TGI4 173 aa17.6■□□□□ 0.41
SIX4-203ENST00000556952 LINC00322Q6ZN03 302 aaPredicted RBP17.6■□□□□ 0.41
SIX4-203ENST00000556952 A8MTW9 85 aa17.59■□□□□ 0.41
SIX4-203ENST00000556952 TMEM88Q6PEY1 159 aa17.59■□□□□ 0.41
SIX4-203ENST00000556952 CBLN2Q8IUK8 224 aa17.59■□□□□ 0.41
SIX4-203ENST00000556952 NUDT10Q8NFP7 164 aa17.59■□□□□ 0.41
SIX4-203ENST00000556952 NUDT11Q96G61 164 aa17.59■□□□□ 0.41
SIX4-203ENST00000556952 TUBA4BQ9H853 241 aa17.59■□□□□ 0.41
SIX4-203ENST00000556952 V9GYV3 84 aa17.59■□□□□ 0.41
SIX4-203ENST00000556952 P01737 135 aa17.58■□□□□ 0.41
SIX4-203ENST00000556952 CRIP1P50238 77 aa17.58■□□□□ 0.41
SIX4-203ENST00000556952 ACTL10Q5JWF8 245 aa17.58■□□□□ 0.41
SIX4-203ENST00000556952 APRG1Q8IVJ8 170 aa17.58■□□□□ 0.41
SIX4-203ENST00000556952 OR4B1Q8NGF8 309 aa17.58■□□□□ 0.41
SIX4-203ENST00000556952 KNCNA6PVL3 124 aa17.57■□□□□ 0.4
SIX4-203ENST00000556952 H3BMM0 161 aa17.57■□□□□ 0.4
SIX4-203ENST00000556952 GATCO43716 136 aaKnown RBP17.57■□□□□ 0.4
SIX4-203ENST00000556952 LEPP41159 167 aa17.57■□□□□ 0.4
SIX4-203ENST00000556952 BTN1A1Q13410 526 aa17.57■□□□□ 0.4
SIX4-203ENST00000556952 ZFAND2AQ8N6M9 145 aa17.57■□□□□ 0.4
SIX4-203ENST00000556952 SORL1Q92673 2214 aa17.57■□□□□ 0.4
SIX4-203ENST00000556952 ZNF705GA8MUZ8 300 aaPredicted RBP17.57■□□□□ 0.4
SIX4-203ENST00000556952 SH2D1AO60880 128 aa17.56■□□□□ 0.4
SIX4-203ENST00000556952 ZNF80P51504 273 aaPredicted RBP17.56■□□□□ 0.4
SIX4-203ENST00000556952 ZNF124Q15973 351 aa17.56■□□□□ 0.4
SIX4-203ENST00000556952 CT83Q5H943 113 aa17.56■□□□□ 0.4
SIX4-203ENST00000556952 CLUHP3Q96NS8 147 aa17.56■□□□□ 0.4
SIX4-203ENST00000556952 IMMP2LQ96T52 175 aa17.56■□□□□ 0.4
SIX4-203ENST00000556952 RPP21Q9H633 154 aaKnown RBP17.56■□□□□ 0.4
SIX4-203ENST00000556952 FABP5P3A8MUU1 101 aa17.55■□□□□ 0.4
SIX4-203ENST00000556952 KLLNB2CW77 178 aa17.55■□□□□ 0.4
SIX4-203ENST00000556952 PFN1P07737 140 aaKnown RBP17.55■□□□□ 0.4
SIX4-203ENST00000556952 CD7P09564 240 aa17.55■□□□□ 0.4
SIX4-203ENST00000556952 TSPOP30536 169 aa17.55■□□□□ 0.4
SIX4-203ENST00000556952 GPX1P07203 203 aa17.54■□□□□ 0.4
SIX4-203ENST00000556952 AMTNQ6UX39 209 aa17.54■□□□□ 0.4
SIX4-203ENST00000556952 GTSCR1Q86UQ5 136 aa17.54■□□□□ 0.4
SIX4-203ENST00000556952 C19orf73Q9NVV2 129 aa17.54■□□□□ 0.4
SIX4-203ENST00000556952 IGKV3-20P01619 116 aa17.53■□□□□ 0.4
SIX4-203ENST00000556952 S100PP25815 95 aa17.53■□□□□ 0.4
SIX4-203ENST00000556952 PRR9Q5T870 116 aa17.53■□□□□ 0.4
SIX4-203ENST00000556952 IL36BQ9NZH7 164 aa17.53■□□□□ 0.4
SIX4-203ENST00000556952 AGRNO00468 2067 aa17.53■□□□□ 0.4
SIX4-203ENST00000556952 CDKN1BP46527 198 aa17.53■□□□□ 0.4
SIX4-203ENST00000556952 KCNIP4Q6PIL6 250 aa17.53■□□□□ 0.4
SIX4-203ENST00000556952 STHQ8IWL8 128 aa17.53■□□□□ 0.4
SIX4-203ENST00000556952 Q6AWC8 147 aa17.52■□□□□ 0.39
SIX4-203ENST00000556952 TRAV21A0A0B4J279 112 aa17.51■□□□□ 0.39
SIX4-203ENST00000556952 KPRPQ5T749 579 aaPredicted RBP17.51■□□□□ 0.39
SIX4-203ENST00000556952 OR2D3Q8NGH3 330 aa17.51■□□□□ 0.39
SIX4-203ENST00000556952 A8MWL6 223 aa17.5■□□□□ 0.39
SIX4-203ENST00000556952 J3KRW8 73 aa17.5■□□□□ 0.39
SIX4-203ENST00000556952 TRPT1Q86TN4 253 aaKnown RBP17.5■□□□□ 0.39
SIX4-203ENST00000556952 TSKUQ8WUA8 353 aa17.5■□□□□ 0.39
SIX4-203ENST00000556952 URGCP-MRPS24S4R325 110 aa17.5■□□□□ 0.39
SIX4-203ENST00000556952 LINC01559Q495D7 138 aa17.49■□□□□ 0.39
SIX4-203ENST00000556952 YPEL4Q96NS1 127 aa17.49■□□□□ 0.39
SIX4-203ENST00000556952 SMIM27A0A1W2PRY6 76 aa17.49■□□□□ 0.39
SIX4-203ENST00000556952 XKRY2A2RUG3 117 aa17.49■□□□□ 0.39
SIX4-203ENST00000556952 C7orf71A4D174 169 aa17.49■□□□□ 0.39
SIX4-203ENST00000556952 TMEM189A5PLL7 270 aa17.49■□□□□ 0.39
SIX4-203ENST00000556952 RBMY1BA6NDE4 496 aaKnown RBP17.49■□□□□ 0.39
SIX4-203ENST00000556952 RBMY1EA6NEQ0 496 aaKnown RBP17.49■□□□□ 0.39
SIX4-203ENST00000556952 CA1P00915 261 aaPredicted RBP17.49■□□□□ 0.39
SIX4-203ENST00000556952 RBMY1DP0C7P1 496 aaKnown RBP17.49■□□□□ 0.39
SIX4-203ENST00000556952 RNASE4P34096 147 aaKnown RBP17.49■□□□□ 0.39
SIX4-203ENST00000556952 ELOBQ15370 118 aa17.49■□□□□ 0.39
SIX4-203ENST00000556952 SPINK13Q1W4C9 94 aa17.49■□□□□ 0.39
SIX4-203ENST00000556952 GFRA4Q9GZZ7 299 aa17.49■□□□□ 0.39
SIX4-203ENST00000556952 M0R2Z0 102 aa17.48■□□□□ 0.39
SIX4-203ENST00000556952 RPS20P60866 119 aaKnown RBP17.48■□□□□ 0.39
SIX4-203ENST00000556952 TRAV9-1A0A075B6T8 112 aa17.47■□□□□ 0.39
SIX4-203ENST00000556952 FAM231BA6NCW3 169 aa17.47■□□□□ 0.39
SIX4-203ENST00000556952 PRB2P02812 416 aaPredicted RBP17.47■□□□□ 0.39
SIX4-203ENST00000556952 KIR3DS1Q14943 382 aa17.47■□□□□ 0.39
SIX4-203ENST00000556952 GFI1BQ5VTD9 330 aa17.47■□□□□ 0.39
SIX4-203ENST00000556952 AMBPP02760 352 aa17.46■□□□□ 0.39
SIX4-203ENST00000556952 ORM1P02763 201 aa17.46■□□□□ 0.39
SIX4-203ENST00000556952 KRTAP10-11P60412 298 aa17.46■□□□□ 0.39
SIX4-203ENST00000556952 RPL19P84098 196 aaKnown RBP17.46■□□□□ 0.39
SIX4-203ENST00000556952 DEFA6Q01524 100 aa17.46■□□□□ 0.39
SIX4-203ENST00000556952 BTF3L4Q96K17 158 aa17.46■□□□□ 0.39
SIX4-203ENST00000556952 WFDC10AQ9H1F0 79 aa17.46■□□□□ 0.39
SIX4-203ENST00000556952 NUTF2P61970 127 aaKnown RBP17.45■□□□□ 0.38
SIX4-203ENST00000556952 ZMAT5Q9UDW3 170 aaKnown RBP17.45■□□□□ 0.38
SIX4-203ENST00000556952 NAT8BQ9UHF3 227 aa17.45■□□□□ 0.38
SIX4-203ENST00000556952 PRKDCP78527 4128 aaKnown RBP17.45■□□□□ 0.38
SIX4-203ENST00000556952 TRBV24-1A0A075B6N3 115 aa17.45■□□□□ 0.38
SIX4-203ENST00000556952 FAM3BP58499 235 aaPredicted RBP17.45■□□□□ 0.38
SIX4-203ENST00000556952 NEU1Q99519 415 aa17.45■□□□□ 0.38
SIX4-203ENST00000556952 TRAV12-2A0A075B6T6 113 aa17.44■□□□□ 0.38
SIX4-203ENST00000556952 A0A1W2PPQ1 181 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms