RNA–Protein interactions for RNA: ENST00000556067.1

ATL1-208, Transcript of atlastin GTPase 1, human

TSL 4

Gene ATL1, Length 550 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATL1-208	ENST00000556067	TRAV8-1	A0A0A6YYK1	113 aa		4.18	□□□□□ -1.74
ATL1-208	ENST00000556067		A8MWL6	223 aa		4.18	□□□□□ -1.74
ATL1-208	ENST00000556067		K7EN84	100 aa		4.18	□□□□□ -1.74
ATL1-208	ENST00000556067	CSN3	P07498	182 aa		4.18	□□□□□ -1.74
ATL1-208	ENST00000556067	GCSH	P23434	173 aa		4.18	□□□□□ -1.74
ATL1-208	ENST00000556067	TSPO	P30536	169 aa		4.18	□□□□□ -1.74
ATL1-208	ENST00000556067	RPS20	P60866	119 aa	Known RBP	4.18	□□□□□ -1.74
ATL1-208	ENST00000556067	PSMG4	Q5JS54	123 aa		4.18	□□□□□ -1.74
ATL1-208	ENST00000556067	FAM162B	Q5T6X4	162 aa		4.18	□□□□□ -1.74
ATL1-208	ENST00000556067	C9orf47	Q6ZRZ4	202 aa		4.18	□□□□□ -1.74
ATL1-208	ENST00000556067	FAM24B	Q8N5W8	94 aa		4.18	□□□□□ -1.74
ATL1-208	ENST00000556067	OR4B1	Q8NGF8	309 aa		4.18	□□□□□ -1.74
ATL1-208	ENST00000556067	OR2K2	Q8NGT1	345 aa		4.18	□□□□□ -1.74
ATL1-208	ENST00000556067	PRR25	Q96S07	402 aa		4.18	□□□□□ -1.74
ATL1-208	ENST00000556067	SPAG8	Q99932	426 aa	Predicted RBP	4.18	□□□□□ -1.74
ATL1-208	ENST00000556067	VGLL1	Q99990	258 aa		4.18	□□□□□ -1.74
ATL1-208	ENST00000556067	RNASE7	Q9H1E1	156 aa	Known RBP	4.18	□□□□□ -1.74
ATL1-208	ENST00000556067	RPP21	Q9H633	154 aa	Known RBP	4.18	□□□□□ -1.74
ATL1-208	ENST00000556067	SIGLEC8	Q9NYZ4	499 aa		4.18	□□□□□ -1.74
ATL1-208	ENST00000556067	IL36B	Q9NZH7	164 aa		4.18	□□□□□ -1.74
ATL1-208	ENST00000556067	LENEP	Q9Y5L5	61 aa		4.18	□□□□□ -1.74
ATL1-208	ENST00000556067	URGCP-MRPS24	S4R325	110 aa		4.18	□□□□□ -1.74
ATL1-208	ENST00000556067	OTOG	Q6ZRI0	2925 aa		4.18	□□□□□ -1.74
ATL1-208	ENST00000556067	MXRA5	Q9NR99	2828 aa		4.17	□□□□□ -1.74
ATL1-208	ENST00000556067	BAHCC1	Q9P281	2608 aa		4.17	□□□□□ -1.74
ATL1-208	ENST00000556067	TRBV7-9	A0A0J9YWB2	115 aa		4.17	□□□□□ -1.74
ATL1-208	ENST00000556067		A0A1W2PPQ1	181 aa		4.17	□□□□□ -1.74
ATL1-208	ENST00000556067	TMEM189	A5PLL7	270 aa		4.17	□□□□□ -1.74
ATL1-208	ENST00000556067	FABP5P3	A8MUU1	101 aa		4.17	□□□□□ -1.74
ATL1-208	ENST00000556067	C1orf196	B1AJZ1	125 aa		4.17	□□□□□ -1.74
ATL1-208	ENST00000556067	PRAC2	D3DTV9	90 aa		4.17	□□□□□ -1.74
ATL1-208	ENST00000556067		K7EQG2	157 aa		4.17	□□□□□ -1.74
ATL1-208	ENST00000556067	SOCS3	O14543	225 aa		4.17	□□□□□ -1.74
ATL1-208	ENST00000556067	IGLV2-11	P01706	119 aa		4.17	□□□□□ -1.74
ATL1-208	ENST00000556067	IGLV2-8	P01709	118 aa		4.17	□□□□□ -1.74
ATL1-208	ENST00000556067	GPX1	P07203	203 aa		4.17	□□□□□ -1.74
ATL1-208	ENST00000556067	ZNF688	P0C7X2	276 aa		4.17	□□□□□ -1.74
ATL1-208	ENST00000556067	RAB5A	P20339	215 aa		4.17	□□□□□ -1.74
ATL1-208	ENST00000556067	EDN2	P20800	178 aa		4.17	□□□□□ -1.74
ATL1-208	ENST00000556067	LEP	P41159	167 aa		4.17	□□□□□ -1.74
ATL1-208	ENST00000556067	RPS10	P46783	165 aa	Known RBP	4.17	□□□□□ -1.74
ATL1-208	ENST00000556067	ERCC8	Q13216	396 aa		4.17	□□□□□ -1.74
ATL1-208	ENST00000556067	DEFB114	Q30KQ6	69 aa		4.17	□□□□□ -1.74
ATL1-208	ENST00000556067	COX19	Q49B96	90 aa		4.17	□□□□□ -1.74
ATL1-208	ENST00000556067	C12orf54	Q6X4T0	127 aa		4.17	□□□□□ -1.74
ATL1-208	ENST00000556067	C3orf56	Q8N813	242 aa		4.17	□□□□□ -1.74
ATL1-208	ENST00000556067	OR8A1	Q8NGG7	326 aa		4.17	□□□□□ -1.74
ATL1-208	ENST00000556067	OR2D3	Q8NGH3	330 aa		4.17	□□□□□ -1.74
ATL1-208	ENST00000556067	DCANP1	Q8TF63	244 aa		4.17	□□□□□ -1.74
ATL1-208	ENST00000556067	TMEM158	Q8WZ71	300 aa		4.17	□□□□□ -1.74
ATL1-208	ENST00000556067	ZC2HC1A	Q96GY0	325 aa		4.17	□□□□□ -1.74
ATL1-208	ENST00000556067	FAM210B	Q96KR6	192 aa		4.17	□□□□□ -1.74
ATL1-208	ENST00000556067	MCRIP2	Q9BUT9	160 aa	Known RBP	4.17	□□□□□ -1.74
ATL1-208	ENST00000556067	AGPAT4-IT1	Q9H0P7	198 aa		4.17	□□□□□ -1.74
ATL1-208	ENST00000556067	NAT8B	Q9UHF3	227 aa		4.17	□□□□□ -1.74
ATL1-208	ENST00000556067	SELENOK	Q9Y6D0	94 aa		4.17	□□□□□ -1.74
ATL1-208	ENST00000556067	MTOR	P42345	2549 aa		4.17	□□□□□ -1.74
ATL1-208	ENST00000556067	CSMD1	Q96PZ7	3565 aa		4.16	□□□□□ -1.74
ATL1-208	ENST00000556067	AKAP9	Q99996	3911 aa		4.16	□□□□□ -1.74
ATL1-208	ENST00000556067	TRBV24-1	A0A075B6N3	115 aa		4.16	□□□□□ -1.74
ATL1-208	ENST00000556067	TGIF2-C20orf24	A0A0A6YYL0	155 aa		4.16	□□□□□ -1.74
ATL1-208	ENST00000556067	FAM231B	A6NCW3	169 aa		4.16	□□□□□ -1.74
ATL1-208	ENST00000556067	COLCA2	A8K830	154 aa		4.16	□□□□□ -1.74
ATL1-208	ENST00000556067	ORM1	P02763	201 aa		4.16	□□□□□ -1.74
ATL1-208	ENST00000556067	S100A8	P05109	93 aa		4.16	□□□□□ -1.74
ATL1-208	ENST00000556067	INSL3	P51460	131 aa		4.16	□□□□□ -1.74
ATL1-208	ENST00000556067	FAM3B	P58499	235 aa	Predicted RBP	4.16	□□□□□ -1.74
ATL1-208	ENST00000556067	RAB5B	P61020	215 aa		4.16	□□□□□ -1.74
ATL1-208	ENST00000556067	ELOB	Q15370	118 aa		4.16	□□□□□ -1.74
ATL1-208	ENST00000556067	CD300E	Q496F6	205 aa	Predicted RBP	4.16	□□□□□ -1.74
ATL1-208	ENST00000556067	C9orf66	Q5T8R8	295 aa		4.16	□□□□□ -1.74
ATL1-208	ENST00000556067		Q6AWC8	147 aa		4.16	□□□□□ -1.74
ATL1-208	ENST00000556067	HIST2H2BD	Q6DRA6	164 aa		4.16	□□□□□ -1.74
ATL1-208	ENST00000556067	WDR73	Q6P4I2	378 aa		4.16	□□□□□ -1.74
ATL1-208	ENST00000556067	FOXI2	Q6ZQN5	318 aa		4.16	□□□□□ -1.74
ATL1-208	ENST00000556067	TMEM61	Q8N0U2	210 aa		4.16	□□□□□ -1.74
ATL1-208	ENST00000556067		Q8TAT8	98 aa		4.16	□□□□□ -1.74
ATL1-208	ENST00000556067	TSKU	Q8WUA8	353 aa		4.16	□□□□□ -1.74
ATL1-208	ENST00000556067	GPR61	Q9BZJ8	451 aa		4.16	□□□□□ -1.74
ATL1-208	ENST00000556067	GFRA4	Q9GZZ7	299 aa		4.16	□□□□□ -1.74
ATL1-208	ENST00000556067	SAV1	Q9H4B6	383 aa	Predicted RBP	4.16	□□□□□ -1.74
ATL1-208	ENST00000556067		V9GYV3	84 aa		4.16	□□□□□ -1.74
ATL1-208	ENST00000556067	HIVEP1	P15822	2718 aa		4.15	□□□□□ -1.75
ATL1-208	ENST00000556067	TRAV21	A0A0B4J279	112 aa		4.15	□□□□□ -1.75
ATL1-208	ENST00000556067		A0A0J9YX75	114 aa		4.15	□□□□□ -1.75
ATL1-208	ENST00000556067	SMIM27	A0A1W2PRY6	76 aa		4.15	□□□□□ -1.75
ATL1-208	ENST00000556067	C19orf71	A6NCJ1	209 aa		4.15	□□□□□ -1.75
ATL1-208	ENST00000556067	IZUMO1R	A6ND01	250 aa		4.15	□□□□□ -1.75
ATL1-208	ENST00000556067	OR11H12	B2RN74	326 aa		4.15	□□□□□ -1.75
ATL1-208	ENST00000556067	SH2D1A	O60880	128 aa		4.15	□□□□□ -1.75
ATL1-208	ENST00000556067	NUDT3	O95989	172 aa		4.15	□□□□□ -1.75
ATL1-208	ENST00000556067	PFN1	P07737	140 aa	Known RBP	4.15	□□□□□ -1.75
ATL1-208	ENST00000556067	ZNF705D	P0CH99	300 aa	Predicted RBP	4.15	□□□□□ -1.75
ATL1-208	ENST00000556067	ZNF705B	P0CI00	300 aa	Predicted RBP	4.15	□□□□□ -1.75
ATL1-208	ENST00000556067	PRB4	P10163	310 aa	Predicted RBP	4.15	□□□□□ -1.75
ATL1-208	ENST00000556067	RNASE4	P34096	147 aa	Known RBP	4.15	□□□□□ -1.75
ATL1-208	ENST00000556067	TCL1A	P56279	114 aa		4.15	□□□□□ -1.75
ATL1-208	ENST00000556067	DEFB131A	P59861	70 aa		4.15	□□□□□ -1.75
ATL1-208	ENST00000556067	KRTAP10-3	P60369	221 aa		4.15	□□□□□ -1.75
ATL1-208	ENST00000556067	RAB4B	P61018	213 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms