RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 PEA15Q15121 130 aa5.56□□□□□ -1.52
TDP1-214ENST00000556063 RRN3P1Q2M238 152 aa5.56□□□□□ -1.52
TDP1-214ENST00000556063 SMUG1Q53HV7 270 aa5.56□□□□□ -1.52
TDP1-214ENST00000556063 TOR2AQ5JU69 321 aa5.56□□□□□ -1.52
TDP1-214ENST00000556063 GFI1BQ5VTD9 330 aa5.56□□□□□ -1.52
TDP1-214ENST00000556063 ZNF705AQ6ZN79 300 aaPredicted RBP5.56□□□□□ -1.52
TDP1-214ENST00000556063 ZFAND2AQ8N6M9 145 aa5.56□□□□□ -1.52
TDP1-214ENST00000556063 C2CD4CQ8TF44 421 aa5.56□□□□□ -1.52
TDP1-214ENST00000556063 SGK494Q96LW2 274 aa5.56□□□□□ -1.52
TDP1-214ENST00000556063 FAM210AQ96ND0 272 aa5.56□□□□□ -1.52
TDP1-214ENST00000556063 NEU1Q99519 415 aa5.56□□□□□ -1.52
TDP1-214ENST00000556063 PYGO2Q9BRQ0 406 aa5.56□□□□□ -1.52
TDP1-214ENST00000556063 SMDT1Q9H4I9 107 aa5.56□□□□□ -1.52
TDP1-214ENST00000556063 RETNQ9HD89 108 aa5.56□□□□□ -1.52
TDP1-214ENST00000556063 U3KQK5 164 aa5.56□□□□□ -1.52
TDP1-214ENST00000556063 TRAV12-3A0A0B4J271 114 aa5.55□□□□□ -1.52
TDP1-214ENST00000556063 TRAV21A0A0B4J279 112 aa5.55□□□□□ -1.52
TDP1-214ENST00000556063 TMEM189A5PLL7 270 aa5.55□□□□□ -1.52
TDP1-214ENST00000556063 RGS13O14921 159 aa5.55□□□□□ -1.52
TDP1-214ENST00000556063 IGLV2-11P01706 119 aa5.55□□□□□ -1.52
TDP1-214ENST00000556063 CLLU1Q5K131 121 aa5.55□□□□□ -1.52
TDP1-214ENST00000556063 Q86TA4 180 aa5.55□□□□□ -1.52
TDP1-214ENST00000556063 BAGE2Q86Y30 109 aa5.55□□□□□ -1.52
TDP1-214ENST00000556063 TMEM183AQ8IXX5 376 aa5.55□□□□□ -1.52
TDP1-214ENST00000556063 C1orf158Q8N1D5 194 aa5.55□□□□□ -1.52
TDP1-214ENST00000556063 PCNPQ8WW12 178 aaKnown RBP5.55□□□□□ -1.52
TDP1-214ENST00000556063 LINC00479Q96M42 142 aa5.55□□□□□ -1.52
TDP1-214ENST00000556063 KRTAP4-8Q9BYQ9 185 aa5.55□□□□□ -1.52
TDP1-214ENST00000556063 BIN3Q9NQY0 253 aa5.55□□□□□ -1.52
TDP1-214ENST00000556063 GCGP01275 180 aa5.54□□□□□ -1.52
TDP1-214ENST00000556063 LTAP01374 205 aa5.54□□□□□ -1.52
TDP1-214ENST00000556063 HTN1P15515 57 aa5.54□□□□□ -1.52
TDP1-214ENST00000556063 RPL35P42766 123 aaKnown RBP5.54□□□□□ -1.52
TDP1-214ENST00000556063 GNG4P50150 75 aa5.54□□□□□ -1.52
TDP1-214ENST00000556063 IFITM2Q01629 132 aa5.54□□□□□ -1.52
TDP1-214ENST00000556063 BTN1A1Q13410 526 aa5.54□□□□□ -1.52
TDP1-214ENST00000556063 Q6AWC8 147 aa5.54□□□□□ -1.52
TDP1-214ENST00000556063 FAM159AQ6UWV7 190 aa5.54□□□□□ -1.52
TDP1-214ENST00000556063 ZNF493Q6ZR52 646 aa5.54□□□□□ -1.52
TDP1-214ENST00000556063 SMIM12Q96EX1 92 aa5.54□□□□□ -1.52
TDP1-214ENST00000556063 IGHV1OR15-1A0A075B7D0 117 aa5.53□□□□□ -1.52
TDP1-214ENST00000556063 TEX48A0A1B0GUV7 120 aa5.53□□□□□ -1.52
TDP1-214ENST00000556063 FABP5P3A8MUU1 101 aa5.53□□□□□ -1.52
TDP1-214ENST00000556063 ZNF324O75467 553 aaPredicted RBP5.53□□□□□ -1.52
TDP1-214ENST00000556063 PFN1P07737 140 aaKnown RBP5.53□□□□□ -1.52
TDP1-214ENST00000556063 LORP23490 312 aaPredicted RBP5.53□□□□□ -1.52
TDP1-214ENST00000556063 CEBPGP53567 150 aa5.53□□□□□ -1.52
TDP1-214ENST00000556063 KIR3DS1Q14943 382 aa5.53□□□□□ -1.52
TDP1-214ENST00000556063 ZNF674Q2M3X9 581 aa5.53□□□□□ -1.52
TDP1-214ENST00000556063 FAM162BQ5T6X4 162 aa5.53□□□□□ -1.52
TDP1-214ENST00000556063 COX8CQ7Z4L0 72 aa5.53□□□□□ -1.52
TDP1-214ENST00000556063 EIF4E3Q8N5X7 224 aaKnown RBP5.53□□□□□ -1.52
TDP1-214ENST00000556063 TVP23CQ96ET8 276 aa5.53□□□□□ -1.52
TDP1-214ENST00000556063 C16orf74Q96GX8 76 aa5.53□□□□□ -1.52
TDP1-214ENST00000556063 KCNS1Q96KK3 526 aa5.53□□□□□ -1.52
TDP1-214ENST00000556063 C8orf49Q96NF6 230 aa5.53□□□□□ -1.52
TDP1-214ENST00000556063 LINC00467Q9BRT7 94 aa5.53□□□□□ -1.52
TDP1-214ENST00000556063 C11orf68Q9H3H3 251 aaKnown RBP5.53□□□□□ -1.52
TDP1-214ENST00000556063 X6R8D5 127 aa5.53□□□□□ -1.52
TDP1-214ENST00000556063 TRGV11A0A075B6L2 103 aa5.52□□□□□ -1.53
TDP1-214ENST00000556063 IGHV4-28A0A0C4DH34 117 aa5.52□□□□□ -1.53
TDP1-214ENST00000556063 RAB19A4D1S5 217 aa5.52□□□□□ -1.53
TDP1-214ENST00000556063 CBY3A6NI87 242 aa5.52□□□□□ -1.53
TDP1-214ENST00000556063 ZNF705GA8MUZ8 300 aaPredicted RBP5.52□□□□□ -1.53
TDP1-214ENST00000556063 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.52□□□□□ -1.53
TDP1-214ENST00000556063 C9JCJ5 164 aa5.52□□□□□ -1.53
TDP1-214ENST00000556063 SRP19P09132 144 aaKnown RBP5.52□□□□□ -1.53
TDP1-214ENST00000556063 RBMY1A1P0DJD3 496 aaKnown RBP5.52□□□□□ -1.53
TDP1-214ENST00000556063 RBMY1CP0DJD4 496 aa5.52□□□□□ -1.53
TDP1-214ENST00000556063 RBMY1FQ15415 496 aaKnown RBP5.52□□□□□ -1.53
TDP1-214ENST00000556063 ANXA2RQ3ZCQ2 193 aa5.52□□□□□ -1.53
TDP1-214ENST00000556063 FAM74A3Q4VXF1 159 aa5.52□□□□□ -1.53
TDP1-214ENST00000556063 CENPWQ5EE01 88 aa5.52□□□□□ -1.53
TDP1-214ENST00000556063 PRR9Q5T870 116 aa5.52□□□□□ -1.53
TDP1-214ENST00000556063 Q8NAQ8 132 aa5.52□□□□□ -1.53
TDP1-214ENST00000556063 IL17DQ8TAD2 202 aa5.52□□□□□ -1.53
TDP1-214ENST00000556063 TMEM263Q8WUH6 116 aaKnown RBP5.52□□□□□ -1.53
TDP1-214ENST00000556063 DAZAP1Q96EP5 407 aaKnown RBP5.52□□□□□ -1.53
TDP1-214ENST00000556063 DERL1Q9BUN8 251 aa5.52□□□□□ -1.53
TDP1-214ENST00000556063 PARLQ9H300 379 aa5.52□□□□□ -1.53
TDP1-214ENST00000556063 SDF2L1Q9HCN8 221 aa5.52□□□□□ -1.53
TDP1-214ENST00000556063 NAGKQ9UJ70 344 aa5.52□□□□□ -1.53
TDP1-214ENST00000556063 STAB2Q8WWQ8 2551 aa5.51□□□□□ -1.53
TDP1-214ENST00000556063 MEGF8Q7Z7M0 2845 aa5.51□□□□□ -1.53
TDP1-214ENST00000556063 A0A0J9YWU9 116 aa5.51□□□□□ -1.53
TDP1-214ENST00000556063 ZNF727A8MUV8 499 aa5.51□□□□□ -1.53
TDP1-214ENST00000556063 SNURFLB1AK76 121 aa5.51□□□□□ -1.53
TDP1-214ENST00000556063 ORM1P02763 201 aa5.51□□□□□ -1.53
TDP1-214ENST00000556063 SPART-AS1P0CW21 52 aa5.51□□□□□ -1.53
TDP1-214ENST00000556063 MGST1P10620 155 aaKnown RBP5.51□□□□□ -1.53
TDP1-214ENST00000556063 EMP1P54849 157 aa5.51□□□□□ -1.53
TDP1-214ENST00000556063 ZNF415Q09FC8 603 aa5.51□□□□□ -1.53
TDP1-214ENST00000556063 TDRG1Q3Y452 100 aa5.51□□□□□ -1.53
TDP1-214ENST00000556063 SOHLH1Q5JUK2 328 aa5.51□□□□□ -1.53
TDP1-214ENST00000556063 MUC21Q5SSG8 566 aa5.51□□□□□ -1.53
TDP1-214ENST00000556063 IBA57Q5T440 356 aaKnown RBP5.51□□□□□ -1.53
TDP1-214ENST00000556063 NHLRC2Q8NBF2 726 aa5.51□□□□□ -1.53
TDP1-214ENST00000556063 ZC2HC1AQ96GY0 325 aa5.51□□□□□ -1.53
TDP1-214ENST00000556063 SMIM7Q9BQ49 75 aa5.51□□□□□ -1.53
TDP1-214ENST00000556063 MLST8Q9BVC4 326 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms