RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 TNFRSF6BO95407 300 aa5.4□□□□□ -1.55
TDP1-213ENST00000555880 PAX8Q06710 450 aa5.4□□□□□ -1.55
TDP1-213ENST00000555880 CCDC140Q96MF4 163 aa5.4□□□□□ -1.55
TDP1-213ENST00000555880 CHD8Q9HCK8 2581 aa5.39□□□□□ -1.55
TDP1-213ENST00000555880 C7orf71A4D174 169 aa5.39□□□□□ -1.55
TDP1-213ENST00000555880 PRAC2D3DTV9 90 aa5.39□□□□□ -1.55
TDP1-213ENST00000555880 SIVA1O15304 175 aa5.39□□□□□ -1.55
TDP1-213ENST00000555880 NDUFS7O75251 213 aa5.39□□□□□ -1.55
TDP1-213ENST00000555880 GNLYP22749 145 aa5.39□□□□□ -1.55
TDP1-213ENST00000555880 FCER1GP30273 86 aa5.39□□□□□ -1.55
TDP1-213ENST00000555880 LEPP41159 167 aa5.39□□□□□ -1.55
TDP1-213ENST00000555880 FXYD7P58549 80 aa5.39□□□□□ -1.55
TDP1-213ENST00000555880 HSD52Q0P140 79 aa5.39□□□□□ -1.55
TDP1-213ENST00000555880 ANKRD39Q53RE8 183 aa5.39□□□□□ -1.55
TDP1-213ENST00000555880 BOD1L2Q8IYS8 172 aa5.39□□□□□ -1.55
TDP1-213ENST00000555880 OR4X2Q8NGF9 303 aa5.39□□□□□ -1.55
TDP1-213ENST00000555880 RNF185Q96GF1 192 aa5.39□□□□□ -1.55
TDP1-213ENST00000555880 ATP6V0BQ99437 205 aa5.39□□□□□ -1.55
TDP1-213ENST00000555880 MSRB1Q9NZV6 116 aa5.39□□□□□ -1.55
TDP1-213ENST00000555880 HIVEP3Q5T1R4 2406 aa5.39□□□□□ -1.55
TDP1-213ENST00000555880 MED13LQ71F56 2210 aa5.39□□□□□ -1.55
TDP1-213ENST00000555880 IGHV3OR16-13A0A075B7E8 117 aa5.39□□□□□ -1.55
TDP1-213ENST00000555880 IGHV3-74A0A0B4J1X5 117 aa5.39□□□□□ -1.55
TDP1-213ENST00000555880 CENPVL3A0A0U1RRI6 287 aa5.39□□□□□ -1.55
TDP1-213ENST00000555880 CLPSL1A2RUU4 121 aa5.39□□□□□ -1.55
TDP1-213ENST00000555880 LINC01546A6NGU7 62 aa5.39□□□□□ -1.55
TDP1-213ENST00000555880 FAM223BA6NKX1 122 aa5.39□□□□□ -1.55
TDP1-213ENST00000555880 G3V318 75 aa5.39□□□□□ -1.55
TDP1-213ENST00000555880 FGF6P10767 208 aa5.39□□□□□ -1.55
TDP1-213ENST00000555880 NMUP48645 174 aa5.39□□□□□ -1.55
TDP1-213ENST00000555880 AMMECR1LQ6DCA0 310 aa5.39□□□□□ -1.55
TDP1-213ENST00000555880 ERASQ7Z444 233 aa5.39□□□□□ -1.55
TDP1-213ENST00000555880 FAM223AQ8IWN6 122 aa5.39□□□□□ -1.55
TDP1-213ENST00000555880 C5orf56Q8N8D9 126 aa5.39□□□□□ -1.55
TDP1-213ENST00000555880 AJUBAQ96IF1 538 aa5.39□□□□□ -1.55
TDP1-213ENST00000555880 C16orf92Q96LL3 132 aa5.39□□□□□ -1.55
TDP1-213ENST00000555880 C18orf15Q96N68 181 aa5.39□□□□□ -1.55
TDP1-213ENST00000555880 AGPAT4-IT1Q9H0P7 198 aa5.39□□□□□ -1.55
TDP1-213ENST00000555880 MOB4Q9Y3A3 225 aa5.39□□□□□ -1.55
TDP1-213ENST00000555880 CACNA1AO00555 2505 aa5.38□□□□□ -1.55
TDP1-213ENST00000555880 IGHV3-49A0A0A0MS15 119 aa5.38□□□□□ -1.55
TDP1-213ENST00000555880 TRAV41A0A0B4J266 112 aa5.38□□□□□ -1.55
TDP1-213ENST00000555880 ZNF207O43670 478 aaKnown RBP5.38□□□□□ -1.55
TDP1-213ENST00000555880 PRSS1P07477 247 aa5.38□□□□□ -1.55
TDP1-213ENST00000555880 EVI2AP22794 236 aa5.38□□□□□ -1.55
TDP1-213ENST00000555880 PPIFP30405 207 aaKnown RBP5.38□□□□□ -1.55
TDP1-213ENST00000555880 LMO4P61968 165 aa5.38□□□□□ -1.55
TDP1-213ENST00000555880 SPANXN1Q5VSR9 72 aa5.38□□□□□ -1.55
TDP1-213ENST00000555880 C9orf47Q6ZRZ4 202 aa5.38□□□□□ -1.55
TDP1-213ENST00000555880 Q8N8P6 123 aa5.38□□□□□ -1.55
TDP1-213ENST00000555880 BPESC1Q9GZL8 116 aa5.38□□□□□ -1.55
TDP1-213ENST00000555880 SMPXQ9UHP9 88 aa5.38□□□□□ -1.55
TDP1-213ENST00000555880 UFC1Q9Y3C8 167 aa5.38□□□□□ -1.55
TDP1-213ENST00000555880 TRAV8-2A0A0B4J237 113 aa5.37□□□□□ -1.55
TDP1-213ENST00000555880 A0A1W2PPR1 153 aa5.37□□□□□ -1.55
TDP1-213ENST00000555880 ATP5LO75964 103 aa5.37□□□□□ -1.55
TDP1-213ENST00000555880 TRGV3P03979 118 aa5.37□□□□□ -1.55
TDP1-213ENST00000555880 UQCRFS1P47985 274 aa5.37□□□□□ -1.55
TDP1-213ENST00000555880 TCTAP57738 103 aa5.37□□□□□ -1.55
TDP1-213ENST00000555880 C9orf139Q6ZV77 190 aa5.37□□□□□ -1.55
TDP1-213ENST00000555880 GTF2H5Q6ZYL4 71 aa5.37□□□□□ -1.55
TDP1-213ENST00000555880 WFDC3Q8IUB2 231 aa5.37□□□□□ -1.55
TDP1-213ENST00000555880 OR2K2Q8NGT1 345 aa5.37□□□□□ -1.55
TDP1-213ENST00000555880 RNASE8Q8TDE3 154 aaKnown RBP5.37□□□□□ -1.55
TDP1-213ENST00000555880 ITLN2Q8WWU7 325 aaPredicted RBP5.37□□□□□ -1.55
TDP1-213ENST00000555880 KRTAP4-12Q9BQ66 201 aa5.37□□□□□ -1.55
TDP1-213ENST00000555880 DKK2Q9UBU2 259 aa5.37□□□□□ -1.55
TDP1-213ENST00000555880 LENEPQ9Y5L5 61 aa5.37□□□□□ -1.55
TDP1-213ENST00000555880 AKAP6Q13023 2319 aa5.37□□□□□ -1.55
TDP1-213ENST00000555880 IGKV3D-20A0A0C4DH25 116 aa5.37□□□□□ -1.55
TDP1-213ENST00000555880 LINC01548A6NM66 108 aa5.37□□□□□ -1.55
TDP1-213ENST00000555880 H3BRM9 83 aa5.37□□□□□ -1.55
TDP1-213ENST00000555880 DPM2O94777 84 aa5.37□□□□□ -1.55
TDP1-213ENST00000555880 IGLV1-40P01703 118 aa5.37□□□□□ -1.55
TDP1-213ENST00000555880 ARL3P36405 182 aa5.37□□□□□ -1.55
TDP1-213ENST00000555880 LAGE3Q14657 143 aa5.37□□□□□ -1.55
TDP1-213ENST00000555880 ODF1Q14990 250 aa5.37□□□□□ -1.55
TDP1-213ENST00000555880 ZNF575Q86XF7 245 aa5.37□□□□□ -1.55
TDP1-213ENST00000555880 TMEM219Q86XT9 240 aa5.37□□□□□ -1.55
TDP1-213ENST00000555880 OR10J6PQ8NGY7 276 aa5.37□□□□□ -1.55
TDP1-213ENST00000555880 PIFOQ8TCI5 191 aa5.37□□□□□ -1.55
TDP1-213ENST00000555880 MYOZ3Q8TDC0 251 aa5.37□□□□□ -1.55
TDP1-213ENST00000555880 TMEM158Q8WZ71 300 aa5.37□□□□□ -1.55
TDP1-213ENST00000555880 U3KQE9 123 aa5.37□□□□□ -1.55
TDP1-213ENST00000555880 GAGE10A6NGK3 116 aa5.36□□□□□ -1.55
TDP1-213ENST00000555880 IGKCP01834 107 aa5.36□□□□□ -1.55
TDP1-213ENST00000555880 KRTAP1-3Q8IUG1 177 aa5.36□□□□□ -1.55
TDP1-213ENST00000555880 MRAP2Q96G30 205 aa5.36□□□□□ -1.55
TDP1-213ENST00000555880 FOXC2Q99958 501 aa5.36□□□□□ -1.55
TDP1-213ENST00000555880 C11orf21Q9P2W6 132 aa5.36□□□□□ -1.55
TDP1-213ENST00000555880 IGHV4-4A0A075B6R2 117 aa5.35□□□□□ -1.55
TDP1-213ENST00000555880 TRAV8-6A0A0B4J262 113 aa5.35□□□□□ -1.55
TDP1-213ENST00000555880 IGHV1-69DA0A0B4J2H0 117 aa5.35□□□□□ -1.55
TDP1-213ENST00000555880 C9orf118A6NHY6 69 aa5.35□□□□□ -1.55
TDP1-213ENST00000555880 H3BVH4 76 aa5.35□□□□□ -1.55
TDP1-213ENST00000555880 NDUFA4O00483 81 aa5.35□□□□□ -1.55
TDP1-213ENST00000555880 OVOL1O14753 267 aa5.35□□□□□ -1.55
TDP1-213ENST00000555880 IGHV1-69P01742 117 aa5.35□□□□□ -1.55
TDP1-213ENST00000555880 SMIM17P0DL12 118 aa5.35□□□□□ -1.55
TDP1-213ENST00000555880 CDKN1BP46527 198 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms