RNA–Protein interactions for RNA: ENST00000555547.5

SRSF5-211, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 5

Gene SRSF5, Length 2,057 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-211ENST00000555547 LINC01356Q8N9X3 169 aa7.42□□□□□ -1.22
SRSF5-211ENST00000555547 IL1F10Q8WWZ1 152 aa7.42□□□□□ -1.22
SRSF5-211ENST00000555547 H1FXQ92522 213 aaKnown RBP7.42□□□□□ -1.22
SRSF5-211ENST00000555547 TP73-AS1Q9UF72 201 aa7.42□□□□□ -1.22
SRSF5-211ENST00000555547 ARL16Q0P5N6 197 aa7.41□□□□□ -1.22
SRSF5-211ENST00000555547 ERCC8Q13216 396 aa7.41□□□□□ -1.22
SRSF5-211ENST00000555547 RSPO1Q2MKA7 263 aaPredicted RBP7.41□□□□□ -1.22
SRSF5-211ENST00000555547 LINC00305Q7Z4B0 112 aa7.41□□□□□ -1.22
SRSF5-211ENST00000555547 C18orf12Q96KH6 178 aa7.41□□□□□ -1.22
SRSF5-211ENST00000555547 MRPS36P82909 103 aaKnown RBP7.4□□□□□ -1.22
SRSF5-211ENST00000555547 LAGE3Q14657 143 aa7.4□□□□□ -1.22
SRSF5-211ENST00000555547 Q6P435 159 aa7.4□□□□□ -1.22
SRSF5-211ENST00000555547 BCL6BQ8N143 479 aaPredicted RBP7.4□□□□□ -1.22
SRSF5-211ENST00000555547 FGF22Q9HCT0 170 aa7.4□□□□□ -1.22
SRSF5-211ENST00000555547 ZNF256Q9Y2P7 627 aaPredicted RBP7.4□□□□□ -1.22
SRSF5-211ENST00000555547 TACC2O95359 2948 aa7.4□□□□□ -1.22
SRSF5-211ENST00000555547 IGHV1-24A0A0C4DH33 117 aa7.4□□□□□ -1.23
SRSF5-211ENST00000555547 SCGB1C2P0DMR2 95 aa7.4□□□□□ -1.23
SRSF5-211ENST00000555547 CXCL5P42830 114 aa7.4□□□□□ -1.23
SRSF5-211ENST00000555547 SRSF9Q13242 221 aaKnown RBP eCLIP7.4□□□□□ -1.232e-10■■□□□ 14.4
SRSF5-211ENST00000555547 MLANAQ16655 118 aa7.4□□□□□ -1.23
SRSF5-211ENST00000555547 ZNF584Q8IVC4 421 aa7.4□□□□□ -1.23
SRSF5-211ENST00000555547 SFTPA2Q8IWL1 248 aa7.4□□□□□ -1.23
SRSF5-211ENST00000555547 COL6A5A8TX70 2615 aa7.39□□□□□ -1.23
SRSF5-211ENST00000555547 HEATR5BQ9P2D3 2071 aa7.39□□□□□ -1.23
SRSF5-211ENST00000555547 H3BSH0 61 aa7.39□□□□□ -1.23
SRSF5-211ENST00000555547 C19orf84I3L1E1 186 aa7.39□□□□□ -1.23
SRSF5-211ENST00000555547 SYNGR2O43760 224 aa7.39□□□□□ -1.23
SRSF5-211ENST00000555547 PEBP1P30086 187 aaKnown RBP7.39□□□□□ -1.23
SRSF5-211ENST00000555547 TRAV8-2A0A0B4J237 113 aa7.39□□□□□ -1.23
SRSF5-211ENST00000555547 TRAV17A0A0B4J275 112 aa7.39□□□□□ -1.23
SRSF5-211ENST00000555547 A0A1B0GXF2 115 aa7.39□□□□□ -1.23
SRSF5-211ENST00000555547 hADV29S1A0JD25 119 aa7.39□□□□□ -1.23
SRSF5-211ENST00000555547 SS18L1O75177 396 aaPredicted RBP7.39□□□□□ -1.23
SRSF5-211ENST00000555547 CST7O76096 145 aa7.39□□□□□ -1.23
SRSF5-211ENST00000555547 ZNF20P17024 532 aa7.39□□□□□ -1.23
SRSF5-211ENST00000555547 ECSCRQ19T08 205 aa7.39□□□□□ -1.23
SRSF5-211ENST00000555547 C1orf140Q5VVS0 124 aa7.39□□□□□ -1.23
SRSF5-211ENST00000555547 SCGB1D4Q6XE38 83 aa7.39□□□□□ -1.23
SRSF5-211ENST00000555547 VN1R4Q7Z5H5 301 aa7.39□□□□□ -1.23
SRSF5-211ENST00000555547 C10orf105Q8TEF2 133 aa7.39□□□□□ -1.23
SRSF5-211ENST00000555547 HDHD3Q9BSH5 251 aaPredicted RBP7.39□□□□□ -1.23
SRSF5-211ENST00000555547 UPK3BQ9BT76 320 aa7.39□□□□□ -1.23
SRSF5-211ENST00000555547 UNC13CQ8NB66 2214 aa7.38□□□□□ -1.23
SRSF5-211ENST00000555547 ZNF469Q96JG9 3925 aaPredicted RBP7.38□□□□□ -1.23
SRSF5-211ENST00000555547 ATRQ13535 2644 aa7.38□□□□□ -1.23
SRSF5-211ENST00000555547 TRGV11A0A075B6L2 103 aa7.38□□□□□ -1.23
SRSF5-211ENST00000555547 IGHV1-58A0A0C4DH39 117 aa7.38□□□□□ -1.23
SRSF5-211ENST00000555547 HLA-DQA1P01909 254 aa7.38□□□□□ -1.23
SRSF5-211ENST00000555547 KTN1-AS1Q86SY8 53 aa7.38□□□□□ -1.23
SRSF5-211ENST00000555547 CCL4L1Q8NHW4 92 aa7.38□□□□□ -1.23
SRSF5-211ENST00000555547 FAM3DQ96BQ1 224 aa7.38□□□□□ -1.23
SRSF5-211ENST00000555547 ZNF503Q96F45 646 aa7.38□□□□□ -1.23
SRSF5-211ENST00000555547 MGST2Q99735 147 aa7.38□□□□□ -1.23
SRSF5-211ENST00000555547 GNG13Q9P2W3 67 aa7.38□□□□□ -1.23
SRSF5-211ENST00000555547 TRAV8-1A0A0A6YYK1 113 aa7.37□□□□□ -1.23
SRSF5-211ENST00000555547 ZFP92A6NM28 416 aa7.37□□□□□ -1.23
SRSF5-211ENST00000555547 ERVK-16P61578 105 aa7.37□□□□□ -1.23
SRSF5-211ENST00000555547 HIST1H4AP62805 103 aaKnown RBP7.37□□□□□ -1.23
SRSF5-211ENST00000555547 PAX8Q06710 450 aa7.37□□□□□ -1.23
SRSF5-211ENST00000555547 Q0VFX4 171 aa7.37□□□□□ -1.23
SRSF5-211ENST00000555547 LRRC29Q8WV35 223 aa7.37□□□□□ -1.23
SRSF5-211ENST00000555547 PKDREJQ9NTG1 2253 aa7.37□□□□□ -1.23
SRSF5-211ENST00000555547 DAD1P61803 113 aa7.37□□□□□ -1.23
SRSF5-211ENST00000555547 LGALS9CQ6DKI2 356 aa7.37□□□□□ -1.23
SRSF5-211ENST00000555547 WDR86Q86TI4 376 aa7.37□□□□□ -1.23
SRSF5-211ENST00000555547 TMEM158Q8WZ71 300 aa7.37□□□□□ -1.23
SRSF5-211ENST00000555547 EXPH5Q8NEV8 1989 aa7.37□□□□□ -1.23
SRSF5-211ENST00000555547 DCHS2Q6V1P9 2916 aa7.37□□□□□ -1.23
SRSF5-211ENST00000555547 CPAMD8Q8IZJ3 1885 aa7.36□□□□□ -1.23
SRSF5-211ENST00000555547 TRAV8-4A0A0B4J246 113 aa7.36□□□□□ -1.23
SRSF5-211ENST00000555547 TIMM23O14925 209 aa7.36□□□□□ -1.23
SRSF5-211ENST00000555547 RPS27P42677 84 aaKnown RBP7.36□□□□□ -1.23
SRSF5-211ENST00000555547 CFHR3Q02985 330 aa7.36□□□□□ -1.23
SRSF5-211ENST00000555547 UNQ9165/PRO28630Q6UXU0 137 aa7.36□□□□□ -1.23
SRSF5-211ENST00000555547 FP248Q71RG6 208 aaPredicted RBP7.36□□□□□ -1.23
SRSF5-211ENST00000555547 SMR3AQ99954 134 aa7.36□□□□□ -1.23
SRSF5-211ENST00000555547 LIME1Q9H400 295 aa7.36□□□□□ -1.23
SRSF5-211ENST00000555547 IL36BQ9NZH7 164 aa7.36□□□□□ -1.23
SRSF5-211ENST00000555547 HCFC1P51610 2035 aa7.36□□□□□ -1.23
SRSF5-211ENST00000555547 LGALS9O00182 355 aa7.36□□□□□ -1.23
SRSF5-211ENST00000555547 CCL8P80075 99 aa7.36□□□□□ -1.23
SRSF5-211ENST00000555547 FAM19A2Q8N3H0 131 aa7.36□□□□□ -1.23
SRSF5-211ENST00000555547 FAM168AQ92567 244 aa7.36□□□□□ -1.23
SRSF5-211ENST00000555547 C4orf45Q96LM5 186 aa7.36□□□□□ -1.23
SRSF5-211ENST00000555547 DEFB127Q9H1M4 99 aa7.36□□□□□ -1.23
SRSF5-211ENST00000555547 CKLFQ9UBR5 152 aa7.36□□□□□ -1.23
SRSF5-211ENST00000555547 LINC00527Q9UJ94 153 aa7.36□□□□□ -1.23
SRSF5-211ENST00000555547 RTTNQ86VV8 2226 aa7.35□□□□□ -1.23
SRSF5-211ENST00000555547 PRRC2AP48634 2157 aaKnown RBP7.35□□□□□ -1.23
SRSF5-211ENST00000555547 JMJD1CQ15652 2540 aa7.35□□□□□ -1.23
SRSF5-211ENST00000555547 SNURFLB1AK76 121 aa7.35□□□□□ -1.23
SRSF5-211ENST00000555547 LINC01619G3V211 115 aa7.35□□□□□ -1.23
SRSF5-211ENST00000555547 J3QT63 122 aa7.35□□□□□ -1.23
SRSF5-211ENST00000555547 DEFB134Q4QY38 66 aa7.35□□□□□ -1.23
SRSF5-211ENST00000555547 WDR38Q5JTN6 314 aa7.35□□□□□ -1.23
SRSF5-211ENST00000555547 FAM120AOSQ5T036 256 aa7.35□□□□□ -1.23
SRSF5-211ENST00000555547 ZNF627Q7L945 461 aa7.35□□□□□ -1.23
SRSF5-211ENST00000555547 CHAC1Q9BUX1 264 aa7.35□□□□□ -1.23
SRSF5-211ENST00000555547 DIDO1Q9BTC0 2240 aaKnown RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms