RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 IGHV3-23P01764 117 aa18.31■□□□□ 0.52
STRN3-207ENST00000555358 IGHG4P01861 327 aa18.31■□□□□ 0.52
STRN3-207ENST00000555358 DEFB113Q30KQ7 82 aa18.31■□□□□ 0.52
STRN3-207ENST00000555358 Q8N9W7 124 aa18.31■□□□□ 0.52
STRN3-207ENST00000555358 SMAD5-AS1Q9Y6J3 95 aa18.31■□□□□ 0.52
STRN3-207ENST00000555358 Q8TAT8 98 aa18.31■□□□□ 0.52
STRN3-207ENST00000555358 VGLL1Q99990 258 aa18.31■□□□□ 0.52
STRN3-207ENST00000555358 HBDP02042 147 aa18.3■□□□□ 0.52
STRN3-207ENST00000555358 IGLC6P0CF74 106 aa18.3■□□□□ 0.52
STRN3-207ENST00000555358 FXYD7P58549 80 aa18.3■□□□□ 0.52
STRN3-207ENST00000555358 PSMG3-AS1Q96PY0 264 aa18.3■□□□□ 0.52
STRN3-207ENST00000555358 TMEM97Q5BJF2 176 aa18.3■□□□□ 0.52
STRN3-207ENST00000555358 OR1N2Q8NGR9 330 aa18.3■□□□□ 0.52
STRN3-207ENST00000555358 TRAV8-6A0A0B4J262 113 aa18.29■□□□□ 0.52
STRN3-207ENST00000555358 FBLL1A6NHQ2 334 aaKnown RBP18.29■□□□□ 0.52
STRN3-207ENST00000555358 SMKR1H3BMG3 65 aa18.29■□□□□ 0.52
STRN3-207ENST00000555358 NPYP01303 97 aa18.29■□□□□ 0.52
STRN3-207ENST00000555358 CTSGP08311 255 aa18.29■□□□□ 0.52
STRN3-207ENST00000555358 CACNG7P62955 275 aa18.29■□□□□ 0.52
STRN3-207ENST00000555358 FER1L6-AS1Q8NA97 138 aa18.29■□□□□ 0.52
STRN3-207ENST00000555358 CR1P17927 2039 aa18.29■□□□□ 0.52
STRN3-207ENST00000555358 RNF223E7ERA6 249 aa18.29■□□□□ 0.52
STRN3-207ENST00000555358 IGFL4Q6B9Z1 124 aa18.29■□□□□ 0.52
STRN3-207ENST00000555358 HLA-DMBP28068 263 aa18.28■□□□□ 0.52
STRN3-207ENST00000555358 BEX4Q9NWD9 120 aaPredicted RBP18.28■□□□□ 0.52
STRN3-207ENST00000555358 IGHV7-81A0A0B4J1V7 117 aa18.27■□□□□ 0.52
STRN3-207ENST00000555358 SEC11AP67812 179 aa18.27■□□□□ 0.52
STRN3-207ENST00000555358 TWIST1Q15672 202 aa18.27■□□□□ 0.52
STRN3-207ENST00000555358 BOD1L2Q8IYS8 172 aa18.27■□□□□ 0.52
STRN3-207ENST00000555358 THYN1Q9P016 225 aa18.27■□□□□ 0.52
STRN3-207ENST00000555358 CKS2P33552 79 aa18.27■□□□□ 0.52
STRN3-207ENST00000555358 PEF1Q9UBV8 284 aaKnown RBP18.27■□□□□ 0.52
STRN3-207ENST00000555358 RABAC1Q9UI14 185 aa18.27■□□□□ 0.52
STRN3-207ENST00000555358 C7orf71A4D174 169 aa18.26■□□□□ 0.51
STRN3-207ENST00000555358 BMI1P35226 326 aa18.26■□□□□ 0.51
STRN3-207ENST00000555358 Q5PR19 223 aa18.26■□□□□ 0.51
STRN3-207ENST00000555358 TMEM219Q86XT9 240 aa18.26■□□□□ 0.51
STRN3-207ENST00000555358 LINC01356Q8N9X3 169 aa18.26■□□□□ 0.51
STRN3-207ENST00000555358 SRSF2Q01130 221 aaKnown RBP18.26■□□□□ 0.51
STRN3-207ENST00000555358 PIFOQ8TCI5 191 aa18.26■□□□□ 0.51
STRN3-207ENST00000555358 IFI27L1Q96BM0 104 aa18.25■□□□□ 0.51
STRN3-207ENST00000555358 CST9LQ9H4G1 147 aa18.25■□□□□ 0.51
STRN3-207ENST00000555358 ZNF469Q96JG9 3925 aaPredicted RBP18.25■□□□□ 0.51
STRN3-207ENST00000555358 RNF185Q96GF1 192 aa18.25■□□□□ 0.51
STRN3-207ENST00000555358 NPFFR1Q9GZQ6 430 aa18.25■□□□□ 0.51
STRN3-207ENST00000555358 CNFNQ9BYD5 112 aa18.24■□□□□ 0.51
STRN3-207ENST00000555358 MEGF9Q9H1U4 602 aa18.23■□□□□ 0.51
STRN3-207ENST00000555358 MSRB1Q9NZV6 116 aa18.23■□□□□ 0.51
STRN3-207ENST00000555358 SMAD7O15105 426 aaKnown RBP18.23■□□□□ 0.51
STRN3-207ENST00000555358 TGFAP01135 160 aa18.23■□□□□ 0.51
STRN3-207ENST00000555358 LRRC75A-AS1Q8N1F1 130 aa18.23■□□□□ 0.51
STRN3-207ENST00000555358 IGHV3OR16-8A0A075B7F1 116 aa18.22■□□□□ 0.51
STRN3-207ENST00000555358 LINC01546A6NGU7 62 aa18.22■□□□□ 0.51
STRN3-207ENST00000555358 GATA3P23771 443 aa18.22■□□□□ 0.51
STRN3-207ENST00000555358 PRRC2AP48634 2157 aaKnown RBP18.22■□□□□ 0.51
STRN3-207ENST00000555358 CREBBPQ92793 2442 aa18.21■□□□□ 0.51
STRN3-207ENST00000555358 LINC01548A6NM66 108 aa18.21■□□□□ 0.51
STRN3-207ENST00000555358 TCTAP57738 103 aa18.21■□□□□ 0.51
STRN3-207ENST00000555358 PRSS57Q6UWY2 283 aa18.21■□□□□ 0.51
STRN3-207ENST00000555358 KRTAP1-3Q8IUG1 177 aa18.21■□□□□ 0.51
STRN3-207ENST00000555358 SCGB2A1O75556 95 aa18.21■□□□□ 0.5
STRN3-207ENST00000555358 GAS8-AS1O95177 125 aa18.21■□□□□ 0.5
STRN3-207ENST00000555358 OCIAD2Q56VL3 154 aa18.21■□□□□ 0.5
STRN3-207ENST00000555358 C5orf56Q8N8D9 126 aa18.21■□□□□ 0.5
STRN3-207ENST00000555358 OR9G4Q8NGQ1 327 aa18.21■□□□□ 0.5
STRN3-207ENST00000555358 ORM1P02763 201 aa18.2■□□□□ 0.5
STRN3-207ENST00000555358 PPBPP02775 128 aa18.2■□□□□ 0.5
STRN3-207ENST00000555358 Q96MF0 132 aa18.2■□□□□ 0.5
STRN3-207ENST00000555358 IGHV3-35A0A0C4DH35 117 aa18.19■□□□□ 0.5
STRN3-207ENST00000555358 SIVA1O15304 175 aa18.19■□□□□ 0.5
STRN3-207ENST00000555358 RNF151Q2KHN1 245 aa18.19■□□□□ 0.5
STRN3-207ENST00000555358 ADAMTSL5Q6ZMM2 481 aa18.19■□□□□ 0.5
STRN3-207ENST00000555358 PRAC2D3DTV9 90 aa18.19■□□□□ 0.5
STRN3-207ENST00000555358 ATP6V0E1O15342 81 aa18.19■□□□□ 0.5
STRN3-207ENST00000555358 ERCC8Q13216 396 aa18.19■□□□□ 0.5
STRN3-207ENST00000555358 LY6EQ16553 131 aa18.19■□□□□ 0.5
STRN3-207ENST00000555358 DKK2Q9UBU2 259 aa18.19■□□□□ 0.5
STRN3-207ENST00000555358 FABP5P3A8MUU1 101 aa18.18■□□□□ 0.5
STRN3-207ENST00000555358 IGHV4-31P0DP07 118 aa18.18■□□□□ 0.5
STRN3-207ENST00000555358 HSD52Q0P140 79 aa18.18■□□□□ 0.5
STRN3-207ENST00000555358 WFDC3Q8IUB2 231 aa18.18■□□□□ 0.5
STRN3-207ENST00000555358 MAP1LC3AQ9H492 121 aa18.18■□□□□ 0.5
STRN3-207ENST00000555358 GCN1Q92616 2671 aaKnown RBP18.18■□□□□ 0.5
STRN3-207ENST00000555358 GAGE12BA1L429 117 aa18.18■□□□□ 0.5
STRN3-207ENST00000555358 H3BRM9 83 aa18.18■□□□□ 0.5
STRN3-207ENST00000555358 LINC01559Q495D7 138 aa18.18■□□□□ 0.5
STRN3-207ENST00000555358 ZFAND3Q9H8U3 227 aa18.18■□□□□ 0.5
STRN3-207ENST00000555358 CCDC168Q8NDH2 2452 aa18.18■□□□□ 0.5
STRN3-207ENST00000555358 ECSCRQ19T08 205 aa18.17■□□□□ 0.5
STRN3-207ENST00000555358 PCP2Q8IVA1 136 aa18.17■□□□□ 0.5
STRN3-207ENST00000555358 ZNF502Q8TBZ5 544 aa18.17■□□□□ 0.5
STRN3-207ENST00000555358 TEX15Q9BXT5 2789 aa18.17■□□□□ 0.5
STRN3-207ENST00000555358 H3BUX3 64 aa18.17■□□□□ 0.5
STRN3-207ENST00000555358 MOB4Q9Y3A3 225 aa18.17■□□□□ 0.5
STRN3-207ENST00000555358 A6NDN8 102 aa18.16■□□□□ 0.5
STRN3-207ENST00000555358 C9orf118A6NHY6 69 aa18.16■□□□□ 0.5
STRN3-207ENST00000555358 UFSP1Q6NVU6 142 aa18.16■□□□□ 0.5
STRN3-207ENST00000555358 JMJD8Q96S16 334 aa18.16■□□□□ 0.5
STRN3-207ENST00000555358 BUB3O43684 328 aa18.15■□□□□ 0.5
STRN3-207ENST00000555358 OR4X2Q8NGF9 303 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms