RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 SPINK13Q1W4C9 94 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 RRN3P1Q2M238 152 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 TMEM42Q69YG0 159 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 GLYATQ6IB77 296 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 ADM2Q7Z4H4 148 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 FAM223AQ8IWN6 122 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 IFT20Q8IY31 132 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 SYS1Q8N2H4 156 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 ZNF555Q8NEP9 628 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 OR8A1Q8NGG7 326 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 OR4C16Q8NGL9 310 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 DYDC1Q8WWB3 177 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 CCDC124Q96CT7 223 aaKnown RBP0.74□□□□□ -2.29
PRPF39-208ENST00000554785 IGF2BP2-AS1Q96M15 143 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 LINC00052Q96N35 136 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 CIB1Q99828 191 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 PARD6GQ9BYG4 376 aaPredicted RBP0.74□□□□□ -2.29
PRPF39-208ENST00000554785 SRRQ9GZT4 340 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 HRASLSQ9HDD0 168 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 NOP10Q9NPE3 64 aaKnown RBP0.74□□□□□ -2.29
PRPF39-208ENST00000554785 ACOT13Q9NPJ3 140 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 CMC2Q9NRP2 79 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 CMTM6Q9NX76 183 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 TAS2R8Q9NYW2 309 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 TAS2R4Q9NYW5 299 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 ZNF492Q9P255 531 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 CLEC2DQ9UHP7 191 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 JPT1Q9UK76 154 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 UFC1Q9Y3C8 167 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 SAMHD1Q9Y3Z3 626 aaKnown RBP0.74□□□□□ -2.29
PRPF39-208ENST00000554785 DNAH8Q96JB1 4490 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 TRAV14DV4A0A0A6YYC5 116 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 TRAV3A0A0B4J244 114 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 A0A1W2PNN7 141 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 ZNF670-ZNF695F2Z2N8 137 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 H3BUA1 57 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 J3QLW9 94 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 UPK2O00526 184 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 DENRO43583 198 aaKnown RBP0.74□□□□□ -2.29
PRPF39-208ENST00000554785 GNG7O60262 68 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 SULT1C4O75897 302 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 IGLV6-57P01721 117 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 IGHV3-30P01768 117 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 IGHV3-33P01772 117 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 ATP5G1P05496 136 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 IGHV3-30-3P0DP02 117 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 IGHV3-30-5P0DP03 117 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 GTF2F2P13984 249 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 ATF1P18846 271 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 ZNF93P35789 620 aaPredicted RBP0.74□□□□□ -2.29
PRPF39-208ENST00000554785 RPL27AP46776 148 aaKnown RBP0.74□□□□□ -2.29
PRPF39-208ENST00000554785 ATP5G3P48201 142 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 PSMD7P51665 324 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 GTF2A1P52655 376 aaPredicted RBP0.74□□□□□ -2.29
PRPF39-208ENST00000554785 KRTAP10-4P60372 401 aaPredicted RBP0.74□□□□□ -2.29
PRPF39-208ENST00000554785 MAGOHP61326 146 aaKnown RBP0.74□□□□□ -2.29
PRPF39-208ENST00000554785 DHRS2Q13268 280 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 VMA21Q3ZAQ7 101 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 XAF1Q6GPH4 301 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 ERICH5Q6P6B1 374 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 GPHB5Q86YW7 130 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 GAPTQ8N292 157 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 ZNF664Q8N3J9 261 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 LINC00311Q8N616 119 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 Q8N814 137 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 MRPL30Q8TCC3 161 aaKnown RBP0.74□□□□□ -2.29
PRPF39-208ENST00000554785 LGALS14Q8TCE9 139 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 GNPDA2Q8TDQ7 276 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 PP6455Q8WZ26 134 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 DNAJC30Q96LL9 226 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 FAAP24Q9BTP7 215 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 DUSP21Q9H596 190 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 NKIRAS1Q9NYS0 192 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 IL20Q9NYY1 176 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 ABRACLQ9P1F3 81 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 PUS1Q9Y606 427 aaKnown RBP eCLIP0.74□□□□□ -2.29
PRPF39-208ENST00000554785 LY96Q9Y6Y9 160 aa0.74□□□□□ -2.29
PRPF39-208ENST00000554785 RAB19A4D1S5 217 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 RBFOX3A6NFN3 312 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 K7EPK0 472 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 GNGT2O14610 69 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 BIRC5O15392 142 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 ORC5O43913 435 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 COX7A2P2O60397 106 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 PITX3O75364 302 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 E2F6O75461 281 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 DCTN3O75935 186 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 S100A9P06702 114 aaKnown RBP0.73□□□□□ -2.29
PRPF39-208ENST00000554785 CRYGDP07320 174 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 HTR1AP08908 422 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 OR13C7P0DN81 318 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 PTHLHP12272 177 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 HRES1P13985 223 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 IFNGR2P38484 337 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 RANBP1P43487 201 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 CLDN12P56749 244 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 INSL4Q14641 139 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 RTL8BQ17RB0 113 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 Q499Y3 187 aa0.73□□□□□ -2.29
PRPF39-208ENST00000554785 HSP90B2PQ58FF3 399 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms