RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 PSENENQ9NZ42 101 aa3.16□□□□□ -1.9
RDH11-204ENST00000553578 LINC00527Q9UJ94 153 aa3.16□□□□□ -1.9
RDH11-204ENST00000553578 ZNF407Q9C0G0 2248 aa3.16□□□□□ -1.9
RDH11-204ENST00000553578 CACNA1GO43497 2377 aa3.16□□□□□ -1.9
RDH11-204ENST00000553578 C5orf49A4QMS7 147 aa3.16□□□□□ -1.9
RDH11-204ENST00000553578 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.16□□□□□ -1.9
RDH11-204ENST00000553578 IGLV1-44P01699 117 aa3.16□□□□□ -1.9
RDH11-204ENST00000553578 CA6P23280 308 aa3.16□□□□□ -1.9
RDH11-204ENST00000553578 ZNF138P52744 262 aa3.16□□□□□ -1.9
RDH11-204ENST00000553578 MAPKAPK5-AS1Q8N8E1 139 aa3.16□□□□□ -1.9
RDH11-204ENST00000553578 RAI1Q7Z5J4 1906 aaPredicted RBP3.15□□□□□ -1.9
RDH11-204ENST00000553578 C3orf85A0A1B0GTC6 90 aa3.15□□□□□ -1.9
RDH11-204ENST00000553578 TCRBV4S1A1TA0A5B7 111 aa3.15□□□□□ -1.9
RDH11-204ENST00000553578 PATE3B3GLJ2 98 aa3.15□□□□□ -1.9
RDH11-204ENST00000553578 SMKR1H3BMG3 65 aa3.15□□□□□ -1.9
RDH11-204ENST00000553578 ATP6V0E1O15342 81 aa3.15□□□□□ -1.9
RDH11-204ENST00000553578 RPL30P62888 115 aaKnown RBP3.15□□□□□ -1.9
RDH11-204ENST00000553578 Q6ZT83 130 aa3.15□□□□□ -1.9
RDH11-204ENST00000553578 TAF15Q92804 592 aaKnown RBP eCLIP3.15□□□□□ -1.9
RDH11-204ENST00000553578 LINC00526Q96FQ7 95 aa3.15□□□□□ -1.9
RDH11-204ENST00000553578 DPH3Q96FX2 82 aa3.15□□□□□ -1.9
RDH11-204ENST00000553578 SLC25A2Q9BXI2 301 aa3.15□□□□□ -1.9
RDH11-204ENST00000553578 RALGAPA1Q6GYQ0 2036 aa3.15□□□□□ -1.9
RDH11-204ENST00000553578 SHANK1Q9Y566 2161 aa3.15□□□□□ -1.9
RDH11-204ENST00000553578 CRXO43186 299 aaPredicted RBP3.15□□□□□ -1.91
RDH11-204ENST00000553578 IGHG2P01859 326 aa3.15□□□□□ -1.91
RDH11-204ENST00000553578 GCHFRP30047 84 aa3.15□□□□□ -1.91
RDH11-204ENST00000553578 MPV17P39210 176 aa3.15□□□□□ -1.91
RDH11-204ENST00000553578 ZNF137PP52743 207 aa3.15□□□□□ -1.91
RDH11-204ENST00000553578 PCBD1P61457 104 aa3.15□□□□□ -1.91
RDH11-204ENST00000553578 C9orf85Q96MD7 179 aa3.15□□□□□ -1.91
RDH11-204ENST00000553578 C11orf1Q9H5F2 150 aa3.15□□□□□ -1.91
RDH11-204ENST00000553578 FREM2Q5SZK8 3169 aa3.15□□□□□ -1.91
RDH11-204ENST00000553578 A0A0A6YYD4 124 aa3.15□□□□□ -1.91
RDH11-204ENST00000553578 IGHV3-64DA0A0J9YX35 117 aa3.15□□□□□ -1.91
RDH11-204ENST00000553578 PINLYPA6NC86 204 aa3.15□□□□□ -1.91
RDH11-204ENST00000553578 PDCD6O75340 191 aa3.15□□□□□ -1.91
RDH11-204ENST00000553578 LYZL6O75951 148 aa3.15□□□□□ -1.91
RDH11-204ENST00000553578 LINC01545Q5VT33 79 aa3.15□□□□□ -1.91
RDH11-204ENST00000553578 MORN3Q6PF18 240 aaPredicted RBP3.15□□□□□ -1.91
RDH11-204ENST00000553578 TMEM61Q8N0U2 210 aa3.15□□□□□ -1.91
RDH11-204ENST00000553578 PIFOQ8TCI5 191 aa3.15□□□□□ -1.91
RDH11-204ENST00000553578 CHCHD1Q96BP2 118 aaKnown RBP3.15□□□□□ -1.91
RDH11-204ENST00000553578 BORCS8Q96FH0 119 aa3.15□□□□□ -1.91
RDH11-204ENST00000553578 Q9HAA7 133 aa3.15□□□□□ -1.91
RDH11-204ENST00000553578 ROS1P08922 2347 aa3.14□□□□□ -1.91
RDH11-204ENST00000553578 KRTAP4-8A0A0G2JLE6 195 aa3.14□□□□□ -1.91
RDH11-204ENST00000553578 IGKV1D-33P01593 117 aa3.14□□□□□ -1.91
RDH11-204ENST00000553578 IGKV1-33P01594 117 aa3.14□□□□□ -1.91
RDH11-204ENST00000553578 FGF6P10767 208 aa3.14□□□□□ -1.91
RDH11-204ENST00000553578 TMEM258P61165 79 aa3.14□□□□□ -1.91
RDH11-204ENST00000553578 TEX36Q5VZQ5 186 aa3.14□□□□□ -1.91
RDH11-204ENST00000553578 PRR26Q8N8Z3 221 aa3.14□□□□□ -1.91
RDH11-204ENST00000553578 NTN5Q8WTR8 489 aaPredicted RBP3.14□□□□□ -1.91
RDH11-204ENST00000553578 FXYD5Q96DB9 178 aa3.14□□□□□ -1.91
RDH11-204ENST00000553578 C18orf12Q96KH6 178 aa3.14□□□□□ -1.91
RDH11-204ENST00000553578 ZNF714Q96N38 554 aa3.14□□□□□ -1.91
RDH11-204ENST00000553578 TTTY13Q9BZ97 58 aa3.14□□□□□ -1.91
RDH11-204ENST00000553578 LINC00574Q9H8X3 128 aa3.14□□□□□ -1.91
RDH11-204ENST00000553578 POLEQ07864 2286 aa3.14□□□□□ -1.91
RDH11-204ENST00000553578 TRBV20OR9-2A0A075B6H5 130 aa3.14□□□□□ -1.91
RDH11-204ENST00000553578 TRAV41A0A0B4J266 112 aa3.14□□□□□ -1.91
RDH11-204ENST00000553578 IZUMO1RA6ND01 250 aa3.14□□□□□ -1.91
RDH11-204ENST00000553578 OVOL1O14753 267 aa3.14□□□□□ -1.91
RDH11-204ENST00000553578 WT1P19544 449 aaPredicted RBP3.14□□□□□ -1.91
RDH11-204ENST00000553578 PMAIP1Q13794 54 aa3.14□□□□□ -1.91
RDH11-204ENST00000553578 TRIP6Q15654 476 aaKnown RBP3.14□□□□□ -1.91
RDH11-204ENST00000553578 Q5XG85 94 aa3.14□□□□□ -1.91
RDH11-204ENST00000553578 ZNF525Q8N782 197 aa3.14□□□□□ -1.91
RDH11-204ENST00000553578 PRSS33Q8NF86 280 aa3.14□□□□□ -1.91
RDH11-204ENST00000553578 UBALD1Q8TB05 177 aa3.14□□□□□ -1.91
RDH11-204ENST00000553578 ZNF414Q96IQ9 312 aa3.14□□□□□ -1.91
RDH11-204ENST00000553578 HIGD1BQ9P298 99 aa3.14□□□□□ -1.91
RDH11-204ENST00000553578 V9GYV3 84 aa3.14□□□□□ -1.91
RDH11-204ENST00000553578 LINC01548A6NM66 108 aa3.14□□□□□ -1.91
RDH11-204ENST00000553578 IGKV3-15P01624 115 aa3.14□□□□□ -1.91
RDH11-204ENST00000553578 IGKCP01834 107 aa3.14□□□□□ -1.91
RDH11-204ENST00000553578 IGHV4-31P0DP07 118 aa3.14□□□□□ -1.91
RDH11-204ENST00000553578 EGR2P11161 476 aaPredicted RBP3.14□□□□□ -1.91
RDH11-204ENST00000553578 UBE2L3P68036 154 aaKnown RBP3.14□□□□□ -1.91
RDH11-204ENST00000553578 EIF4EBP1Q13541 118 aaPredicted RBP3.14□□□□□ -1.91
RDH11-204ENST00000553578 VMA21Q3ZAQ7 101 aa3.14□□□□□ -1.91
RDH11-204ENST00000553578 AAED1Q7RTV5 226 aa3.14□□□□□ -1.91
RDH11-204ENST00000553578 ABHD14BQ96IU4 210 aa3.14□□□□□ -1.91
RDH11-204ENST00000553578 TTTY12Q9BZ98 90 aa3.14□□□□□ -1.91
RDH11-204ENST00000553578 ARRDC1-AS1Q9H2J1 176 aa3.14□□□□□ -1.91
RDH11-204ENST00000553578 IL36RNQ9UBH0 155 aa3.14□□□□□ -1.91
RDH11-204ENST00000553578 SPTBN2O15020 2390 aa3.14□□□□□ -1.91
RDH11-204ENST00000553578 PGPA6NDG6 321 aa3.13□□□□□ -1.91
RDH11-204ENST00000553578 SLC25A20O43772 301 aa3.13□□□□□ -1.91
RDH11-204ENST00000553578 OXTP01178 125 aa3.13□□□□□ -1.91
RDH11-204ENST00000553578 CD24P25063 80 aa3.13□□□□□ -1.91
RDH11-204ENST00000553578 EDDM3BP56851 147 aa3.13□□□□□ -1.91
RDH11-204ENST00000553578 TMEM14EPQ6UXP3 125 aa3.13□□□□□ -1.91
RDH11-204ENST00000553578 Q6YL49 198 aa3.13□□□□□ -1.91
RDH11-204ENST00000553578 IGHV4OR15-8A0A075B7B6 117 aa3.13□□□□□ -1.91
RDH11-204ENST00000553578 LINC01549A6NIU2 74 aa3.13□□□□□ -1.91
RDH11-204ENST00000553578 NCR2O95944 276 aa3.13□□□□□ -1.91
RDH11-204ENST00000553578 LTAP01374 205 aa3.13□□□□□ -1.91
RDH11-204ENST00000553578 LCE4AQ5TA78 99 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms