RNA–Protein interactions for RNA: ENST00000552610.1

RAB3IP-217, Transcript of RAB3A interacting protein, humanhuman

TSL 2

Gene RAB3IP, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-217ENST00000552610 DEFB113Q30KQ7 82 aa1.72□□□□□ -2.13
RAB3IP-217ENST00000552610 CROCCP2Q86T23 111 aa1.72□□□□□ -2.13
RAB3IP-217ENST00000552610 SPTBN4Q9H254 2564 aa1.72□□□□□ -2.13
RAB3IP-217ENST00000552610 SPTBN2O15020 2390 aa1.72□□□□□ -2.13
RAB3IP-217ENST00000552610 DOCK4Q8N1I0 1966 aa1.72□□□□□ -2.13
RAB3IP-217ENST00000552610 CACNA1BQ00975 2339 aa1.72□□□□□ -2.13
RAB3IP-217ENST00000552610 PTPRFP10586 1907 aa1.72□□□□□ -2.13
RAB3IP-217ENST00000552610 MYH1P12882 1939 aa1.72□□□□□ -2.13
RAB3IP-217ENST00000552610 ALPK3Q96L96 1907 aa1.72□□□□□ -2.13
RAB3IP-217ENST00000552610 ARAP2Q8WZ64 1704 aa1.71□□□□□ -2.13
RAB3IP-217ENST00000552610 DOCK1Q14185 1865 aa1.71□□□□□ -2.14
RAB3IP-217ENST00000552610 SCN8AQ9UQD0 1980 aa1.71□□□□□ -2.14
RAB3IP-217ENST00000552610 A0A1B0GV72 72 aa1.71□□□□□ -2.14
RAB3IP-217ENST00000552610 MAP1LC3B2A6NCE7 125 aa1.71□□□□□ -2.14
RAB3IP-217ENST00000552610 C17orf112F2Z3M2 114 aa1.71□□□□□ -2.14
RAB3IP-217ENST00000552610 IFNA4P05014 189 aa1.71□□□□□ -2.14
RAB3IP-217ENST00000552610 CSN2P05814 226 aa1.71□□□□□ -2.14
RAB3IP-217ENST00000552610 OR10J4P0C629 311 aa1.71□□□□□ -2.14
RAB3IP-217ENST00000552610 GLRXP35754 106 aa1.71□□□□□ -2.14
RAB3IP-217ENST00000552610 INSL3P51460 131 aa1.71□□□□□ -2.14
RAB3IP-217ENST00000552610 PLCXD2Q0VAA5 305 aa1.71□□□□□ -2.14
RAB3IP-217ENST00000552610 C2orf82Q6UX34 121 aa1.71□□□□□ -2.14
RAB3IP-217ENST00000552610 Q6ZSA8 131 aa1.71□□□□□ -2.14
RAB3IP-217ENST00000552610 MAP1LC3BQ9GZQ8 125 aa1.71□□□□□ -2.14
RAB3IP-217ENST00000552610 LAMB1P07942 1786 aa1.71□□□□□ -2.14
RAB3IP-217ENST00000552610 HTTP42858 3142 aa1.71□□□□□ -2.14
RAB3IP-217ENST00000552610 DDX60LQ5H9U9 1706 aaKnown RBP1.71□□□□□ -2.14
RAB3IP-217ENST00000552610 CNOT1A5YKK6 2376 aaKnown RBP1.71□□□□□ -2.14
RAB3IP-217ENST00000552610 PLXNA1Q9UIW2 1896 aa1.71□□□□□ -2.14
RAB3IP-217ENST00000552610 MED13Q9UHV7 2174 aa1.71□□□□□ -2.14
RAB3IP-217ENST00000552610 RP1L1Q8IWN7 2480 aaPredicted RBP1.71□□□□□ -2.14
RAB3IP-217ENST00000552610 DOCK2Q92608 1830 aa1.7□□□□□ -2.14
RAB3IP-217ENST00000552610 MYH10P35580 1976 aa1.7□□□□□ -2.14
RAB3IP-217ENST00000552610 TRBV6-8A0A0A6YYG3 113 aa1.7□□□□□ -2.14
RAB3IP-217ENST00000552610 TCRBV4S1A1TA0A5B7 111 aa1.7□□□□□ -2.14
RAB3IP-217ENST00000552610 PGRMC1O00264 195 aaKnown RBP1.7□□□□□ -2.14
RAB3IP-217ENST00000552610 GPR31O00270 319 aa1.7□□□□□ -2.14
RAB3IP-217ENST00000552610 ROMO1P60602 79 aa1.7□□□□□ -2.14
RAB3IP-217ENST00000552610 TFAMQ00059 246 aaKnown RBP1.7□□□□□ -2.14
RAB3IP-217ENST00000552610 C1orf140Q5VVS0 124 aa1.7□□□□□ -2.14
RAB3IP-217ENST00000552610 DCUN1D2Q6PH85 259 aa1.7□□□□□ -2.14
RAB3IP-217ENST00000552610 ZNF714Q96N38 554 aa1.7□□□□□ -2.14
RAB3IP-217ENST00000552610 SMPXQ9UHP9 88 aa1.7□□□□□ -2.14
RAB3IP-217ENST00000552610 Q9Y3F1 56 aa1.7□□□□□ -2.14
RAB3IP-217ENST00000552610 MCM3APO60318 1980 aa1.7□□□□□ -2.14
RAB3IP-217ENST00000552610 PHIPQ8WWQ0 1821 aa1.7□□□□□ -2.14
RAB3IP-217ENST00000552610 VCANP13611 3396 aa1.7□□□□□ -2.14
RAB3IP-217ENST00000552610 MYH8P13535 1937 aa1.7□□□□□ -2.14
RAB3IP-217ENST00000552610 UNC80Q8N2C7 3258 aa1.69□□□□□ -2.14
RAB3IP-217ENST00000552610 TET1Q8NFU7 2136 aa1.69□□□□□ -2.14
RAB3IP-217ENST00000552610 PRUNE2Q8WUY3 3088 aa1.69□□□□□ -2.14
RAB3IP-217ENST00000552610 CACNA1AO00555 2505 aa1.69□□□□□ -2.14
RAB3IP-217ENST00000552610 PLXNB2O15031 1838 aa1.69□□□□□ -2.14
RAB3IP-217ENST00000552610 LOC110117498A0A087WWA1 95 aa1.69□□□□□ -2.14
RAB3IP-217ENST00000552610 TMBIM6P55061 237 aa1.69□□□□□ -2.14
RAB3IP-217ENST00000552610 LTC4SQ16873 150 aa1.69□□□□□ -2.14
RAB3IP-217ENST00000552610 RTL8BQ17RB0 113 aa1.69□□□□□ -2.14
RAB3IP-217ENST00000552610 TMEM78Q5T7P6 136 aa1.69□□□□□ -2.14
RAB3IP-217ENST00000552610 C4orf22Q6V702 233 aa1.69□□□□□ -2.14
RAB3IP-217ENST00000552610 CLECL1Q8IZS7 167 aa1.69□□□□□ -2.14
RAB3IP-217ENST00000552610 OR5D16Q8NGK9 328 aa1.69□□□□□ -2.14
RAB3IP-217ENST00000552610 DYDC1Q8WWB3 177 aa1.69□□□□□ -2.14
RAB3IP-217ENST00000552610 TP53RKQ96S44 253 aa1.69□□□□□ -2.14
RAB3IP-217ENST00000552610 RETNLBQ9BQ08 111 aa1.69□□□□□ -2.14
RAB3IP-217ENST00000552610 MRPL57Q9BQC6 102 aaKnown RBP1.69□□□□□ -2.14
RAB3IP-217ENST00000552610 CACYBPQ9HB71 228 aaKnown RBP1.69□□□□□ -2.14
RAB3IP-217ENST00000552610 MED11Q9P086 117 aa1.69□□□□□ -2.14
RAB3IP-217ENST00000552610 A0A1B0GUL6 1792 aa1.69□□□□□ -2.14
RAB3IP-217ENST00000552610 RFX7Q2KHR2 1363 aa1.69□□□□□ -2.14
RAB3IP-217ENST00000552610 DNAH12Q6ZR08 3092 aa1.69□□□□□ -2.14
RAB3IP-217ENST00000552610 MYO5AQ9Y4I1 1855 aaKnown RBP1.69□□□□□ -2.14
RAB3IP-217ENST00000552610 DIDO1Q9BTC0 2240 aaKnown RBP1.68□□□□□ -2.14
RAB3IP-217ENST00000552610 CHD8Q9HCK8 2581 aa1.68□□□□□ -2.14
RAB3IP-217ENST00000552610 LAMA2P24043 3122 aaKnown RBP1.68□□□□□ -2.14
RAB3IP-217ENST00000552610 LOC285556D6RIA3 1793 aa1.68□□□□□ -2.14
RAB3IP-217ENST00000552610 GEMIN2O14893 280 aaKnown RBP1.68□□□□□ -2.14
RAB3IP-217ENST00000552610 HIST1H2BKO60814 126 aa1.68□□□□□ -2.14
RAB3IP-217ENST00000552610 HIST1H2BJP06899 126 aa1.68□□□□□ -2.14
RAB3IP-217ENST00000552610 ZNF93P35789 620 aaPredicted RBP1.68□□□□□ -2.14
RAB3IP-217ENST00000552610 DSCR4P56555 118 aaPredicted RBP1.68□□□□□ -2.14
RAB3IP-217ENST00000552610 PATE2Q6UY27 113 aa1.68□□□□□ -2.14
RAB3IP-217ENST00000552610 ST6GALNAC3Q8NDV1 305 aa1.68□□□□□ -2.14
RAB3IP-217ENST00000552610 OR5D14Q8NGL3 314 aa1.68□□□□□ -2.14
RAB3IP-217ENST00000552610 ISOC1Q96CN7 298 aa1.68□□□□□ -2.14
RAB3IP-217ENST00000552610 OR52A1Q9UKL2 312 aa1.68□□□□□ -2.14
RAB3IP-217ENST00000552610 NUBP2Q9Y5Y2 271 aa1.68□□□□□ -2.14
RAB3IP-217ENST00000552610 ACACBO00763 2458 aa1.68□□□□□ -2.14
RAB3IP-217ENST00000552610 ASXL3Q9C0F0 2248 aa1.68□□□□□ -2.14
RAB3IP-217ENST00000552610 EML6Q6ZMW3 1958 aa1.68□□□□□ -2.14
RAB3IP-217ENST00000552610 CEP250Q9BV73 2442 aa1.68□□□□□ -2.14
RAB3IP-217ENST00000552610 MYH4Q9Y623 1939 aa1.68□□□□□ -2.14
RAB3IP-217ENST00000552610 KNTC1P50748 2209 aa1.67□□□□□ -2.14
RAB3IP-217ENST00000552610 GVINP1Q7Z2Y8 2422 aa1.67□□□□□ -2.14
RAB3IP-217ENST00000552610 TECTAO75443 2155 aa1.67□□□□□ -2.14
RAB3IP-217ENST00000552610 CCDC160A6NGH7 325 aa1.67□□□□□ -2.14
RAB3IP-217ENST00000552610 ZNF736B4DX44 427 aaPredicted RBP1.67□□□□□ -2.14
RAB3IP-217ENST00000552610 E7EUB6 86 aa1.67□□□□□ -2.14
RAB3IP-217ENST00000552610 H3BQV1 296 aa1.67□□□□□ -2.14
RAB3IP-217ENST00000552610 M0R2N4 97 aa1.67□□□□□ -2.14
RAB3IP-217ENST00000552610 CXCL1P09341 107 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms