RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 KRTAP10-2P60368 255 aa8.86□□□□□ -0.99
PTCH1-218ENST00000548945 RAB14P61106 215 aa8.86□□□□□ -0.99
PTCH1-218ENST00000548945 Q6ZTI0 123 aa8.86□□□□□ -0.99
PTCH1-218ENST00000548945 OR1L4Q8NGR5 311 aa8.86□□□□□ -0.99
PTCH1-218ENST00000548945 PFDN5Q99471 154 aa8.86□□□□□ -0.99
PTCH1-218ENST00000548945 LINC00467Q9BRT7 94 aa8.86□□□□□ -0.99
PTCH1-218ENST00000548945 PSMG3Q9BT73 122 aaPredicted RBP8.86□□□□□ -0.99
PTCH1-218ENST00000548945 ZNF586Q9NXT0 402 aa8.86□□□□□ -0.99
PTCH1-218ENST00000548945 TIMM9Q9Y5J7 89 aa8.86□□□□□ -0.99
PTCH1-218ENST00000548945 A0A096LPF7 62 aa8.85□□□□□ -0.99
PTCH1-218ENST00000548945 C17orf112F2Z3M2 114 aa8.85□□□□□ -0.99
PTCH1-218ENST00000548945 H3BTX0 84 aa8.85□□□□□ -0.99
PTCH1-218ENST00000548945 VSIG2Q96IQ7 327 aa8.85□□□□□ -0.99
PTCH1-218ENST00000548945 SH3BGRL3Q9H299 93 aa8.85□□□□□ -0.99
PTCH1-218ENST00000548945 KCNIP2Q9NS61 270 aa8.85□□□□□ -0.99
PTCH1-218ENST00000548945 TRGV2A0A075B6R0 118 aa8.84□□□□□ -0.99
PTCH1-218ENST00000548945 C7orf71A4D174 169 aa8.84□□□□□ -0.99
PTCH1-218ENST00000548945 KLLNB2CW77 178 aa8.84□□□□□ -0.99
PTCH1-218ENST00000548945 UMAD1C9J7I0 102 aa8.84□□□□□ -0.99
PTCH1-218ENST00000548945 SULT1A2P50226 295 aa8.84□□□□□ -0.99
PTCH1-218ENST00000548945 RAB5CP51148 216 aa8.84□□□□□ -0.99
PTCH1-218ENST00000548945 SERF2P84101 59 aa8.84□□□□□ -0.99
PTCH1-218ENST00000548945 ANXA2RQ3ZCQ2 193 aa8.84□□□□□ -0.99
PTCH1-218ENST00000548945 FAM74A1Q5RGS3 127 aa8.84□□□□□ -0.99
PTCH1-218ENST00000548945 Q6ZRN7 208 aaPredicted RBP8.84□□□□□ -0.99
PTCH1-218ENST00000548945 C11orf72Q8NBR9 251 aa8.84□□□□□ -0.99
PTCH1-218ENST00000548945 OR2G3Q8NGZ4 309 aa8.84□□□□□ -0.99
PTCH1-218ENST00000548945 NPCDR1Q9BY65 106 aa8.84□□□□□ -0.99
PTCH1-218ENST00000548945 PRELID1Q9Y255 219 aa8.84□□□□□ -0.99
PTCH1-218ENST00000548945 HERC1Q15751 4861 aa8.83□□□□□ -1
PTCH1-218ENST00000548945 TRBV19A0A075B6N1 114 aa8.83□□□□□ -1
PTCH1-218ENST00000548945 J3KRW8 73 aa8.83□□□□□ -1
PTCH1-218ENST00000548945 ZNF324O75467 553 aaPredicted RBP8.83□□□□□ -1
PTCH1-218ENST00000548945 NMBP08949 121 aa8.83□□□□□ -1
PTCH1-218ENST00000548945 RPL29P47914 159 aaKnown RBP8.83□□□□□ -1
PTCH1-218ENST00000548945 LINC00315P59091 139 aa8.83□□□□□ -1
PTCH1-218ENST00000548945 PDE6HQ13956 83 aa8.83□□□□□ -1
PTCH1-218ENST00000548945 CLLU1Q5K131 121 aa8.83□□□□□ -1
PTCH1-218ENST00000548945 AKR1C8PQ5T2L2 129 aa8.83□□□□□ -1
PTCH1-218ENST00000548945 MIC13Q5XKP0 118 aa8.83□□□□□ -1
PTCH1-218ENST00000548945 EIF4E3Q8N5X7 224 aaKnown RBP8.83□□□□□ -1
PTCH1-218ENST00000548945 FAM19A4Q96LR4 140 aa8.83□□□□□ -1
PTCH1-218ENST00000548945 LINC00477Q96M19 166 aa8.83□□□□□ -1
PTCH1-218ENST00000548945 PGPEP1Q9NXJ5 209 aa8.83□□□□□ -1
PTCH1-218ENST00000548945 TMEM14CQ9P0S9 112 aa8.83□□□□□ -1
PTCH1-218ENST00000548945 SRRM2Q9UQ35 2752 aaKnown RBP8.82□□□□□ -1
PTCH1-218ENST00000548945 TRAV5A0A0B4J249 113 aa8.82□□□□□ -1
PTCH1-218ENST00000548945 SIVA1O15304 175 aa8.82□□□□□ -1
PTCH1-218ENST00000548945 SPINK4O60575 86 aa8.82□□□□□ -1
PTCH1-218ENST00000548945 IBA57Q5T440 356 aaKnown RBP8.82□□□□□ -1
PTCH1-218ENST00000548945 CDPF1Q6NVV7 123 aa8.82□□□□□ -1
PTCH1-218ENST00000548945 GSN-AS1Q9NRJ2 163 aa8.82□□□□□ -1
PTCH1-218ENST00000548945 SLC39A9Q9NUM3 307 aa8.82□□□□□ -1
PTCH1-218ENST00000548945 FUT9Q9Y231 359 aa8.82□□□□□ -1
PTCH1-218ENST00000548945 TRGV1A0A0A0MS02 117 aa8.81□□□□□ -1
PTCH1-218ENST00000548945 EREGO14944 169 aa8.81□□□□□ -1
PTCH1-218ENST00000548945 MBP02144 154 aa8.81□□□□□ -1
PTCH1-218ENST00000548945 HIST1H1EP10412 219 aaKnown RBP8.81□□□□□ -1
PTCH1-218ENST00000548945 CRISP2P16562 243 aa8.81□□□□□ -1
PTCH1-218ENST00000548945 TCL1AP56279 114 aa8.81□□□□□ -1
PTCH1-218ENST00000548945 SLAQ13239 276 aa8.81□□□□□ -1
PTCH1-218ENST00000548945 NDUFA5Q16718 116 aa8.81□□□□□ -1
PTCH1-218ENST00000548945 DPPA3Q6W0C5 159 aa8.81□□□□□ -1
PTCH1-218ENST00000548945 ICOSQ9Y6W8 199 aa8.81□□□□□ -1
PTCH1-218ENST00000548945 VPS13BQ7Z7G8 4022 aa8.8□□□□□ -1
PTCH1-218ENST00000548945 M0R3E3 92 aa8.8□□□□□ -1
PTCH1-218ENST00000548945 NDUFB4O95168 129 aa8.8□□□□□ -1
PTCH1-218ENST00000548945 BLOC1S1P78537 153 aa8.8□□□□□ -1
PTCH1-218ENST00000548945 ERCC8Q13216 396 aa8.8□□□□□ -1
PTCH1-218ENST00000548945 FFAR4Q5NUL3 377 aa8.8□□□□□ -1
PTCH1-218ENST00000548945 C9orf47Q6ZRZ4 202 aa8.8□□□□□ -1
PTCH1-218ENST00000548945 AGPAT4-IT1Q9H0P7 198 aa8.8□□□□□ -1
PTCH1-218ENST00000548945 PRO0255Q9UI72 69 aa8.8□□□□□ -1
PTCH1-218ENST00000548945 EPM2AB3EWF7 344 aa8.79□□□□□ -1
PTCH1-218ENST00000548945 K7EP13 123 aa8.79□□□□□ -1
PTCH1-218ENST00000548945 PAX4O43316 350 aa8.79□□□□□ -1
PTCH1-218ENST00000548945 NXPH4O95158 308 aa8.79□□□□□ -1
PTCH1-218ENST00000548945 GPX1P07203 203 aa8.79□□□□□ -1
PTCH1-218ENST00000548945 RNASE4P34096 147 aaKnown RBP8.79□□□□□ -1
PTCH1-218ENST00000548945 ERVFC1-1P60608 527 aa8.79□□□□□ -1
PTCH1-218ENST00000548945 BTN1A1Q13410 526 aa8.79□□□□□ -1
PTCH1-218ENST00000548945 ACOT6Q3I5F7 207 aaPredicted RBP8.79□□□□□ -1
PTCH1-218ENST00000548945 NFE4Q86UQ8 179 aa8.79□□□□□ -1
PTCH1-218ENST00000548945 FAM213BQ8TBF2 198 aa8.79□□□□□ -1
PTCH1-218ENST00000548945 PCNPQ8WW12 178 aaKnown RBP8.79□□□□□ -1
PTCH1-218ENST00000548945 VGLL1Q99990 258 aa8.79□□□□□ -1
PTCH1-218ENST00000548945 AAMDCQ9H7C9 122 aa8.79□□□□□ -1
PTCH1-218ENST00000548945 KLF12Q9Y4X4 402 aa8.79□□□□□ -1
PTCH1-218ENST00000548945 TRBV7-9A0A0J9YWB2 115 aa8.78□□□□□ -1
PTCH1-218ENST00000548945 TMEM78Q5T7P6 136 aa8.78□□□□□ -1
PTCH1-218ENST00000548945 ZFAND2AQ8N6M9 145 aa8.78□□□□□ -1
PTCH1-218ENST00000548945 IGHV1OR15-1A0A075B7D0 117 aa8.77□□□□□ -1.01
PTCH1-218ENST00000548945 LINC00862A6NCI5 91 aa8.77□□□□□ -1.01
PTCH1-218ENST00000548945 CRYBA4P53673 196 aa8.77□□□□□ -1.01
PTCH1-218ENST00000548945 RAB2AP61019 212 aa8.77□□□□□ -1.01
PTCH1-218ENST00000548945 MRPL23Q16540 153 aaKnown RBP8.77□□□□□ -1.01
PTCH1-218ENST00000548945 LYPD1Q8N2G4 141 aa8.77□□□□□ -1.01
PTCH1-218ENST00000548945 OR10G4Q8NGN3 311 aa8.77□□□□□ -1.01
PTCH1-218ENST00000548945 OR10G9Q8NGN4 311 aa8.77□□□□□ -1.01
PTCH1-218ENST00000548945 OR10G7Q8NGN6 311 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms