RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 NAGKQ9UJ70 344 aa12.6□□□□□ -0.39
CHFR-224ENST00000545046 ITPR3Q14573 2671 aa12.6□□□□□ -0.39
CHFR-224ENST00000545046 NTF3P20783 257 aa12.59□□□□□ -0.39
CHFR-224ENST00000545046 EDN2P20800 178 aa12.59□□□□□ -0.39
CHFR-224ENST00000545046 REC114Q7Z4M0 266 aa12.59□□□□□ -0.39
CHFR-224ENST00000545046 IGHV4OR15-8A0A075B7B6 117 aa12.59□□□□□ -0.39
CHFR-224ENST00000545046 A0A087WW49 117 aa12.59□□□□□ -0.39
CHFR-224ENST00000545046 TMEM213A2RRL7 107 aa12.59□□□□□ -0.39
CHFR-224ENST00000545046 LGALS9O00182 355 aa12.59□□□□□ -0.39
CHFR-224ENST00000545046 SRD5A1P18405 259 aa12.59□□□□□ -0.39
CHFR-224ENST00000545046 FAM19A2Q8N3H0 131 aa12.59□□□□□ -0.39
CHFR-224ENST00000545046 SELENOKQ9Y6D0 94 aa12.59□□□□□ -0.39
CHFR-224ENST00000545046 FAM181BA6NEQ2 426 aa12.58□□□□□ -0.4
CHFR-224ENST00000545046 TWIST1Q15672 202 aa12.58□□□□□ -0.4
CHFR-224ENST00000545046 ZNF575Q86XF7 245 aa12.58□□□□□ -0.4
CHFR-224ENST00000545046 MUC21A0A0G2JKD1 596 aa12.57□□□□□ -0.4
CHFR-224ENST00000545046 MUC21A0A140T8X8 626 aa12.57□□□□□ -0.4
CHFR-224ENST00000545046 SYNJ2BPP57105 145 aa12.57□□□□□ -0.4
CHFR-224ENST00000545046 PKIAP61925 76 aa12.57□□□□□ -0.4
CHFR-224ENST00000545046 MUC21Q5SSG8 566 aa12.57□□□□□ -0.4
CHFR-224ENST00000545046 KLHDC1Q8N7A1 406 aa12.57□□□□□ -0.4
CHFR-224ENST00000545046 TSTD3H0UI37 97 aa12.57□□□□□ -0.4
CHFR-224ENST00000545046 CD33P20138 364 aa12.57□□□□□ -0.4
CHFR-224ENST00000545046 OR8A1Q8NGG7 326 aa12.57□□□□□ -0.4
CHFR-224ENST00000545046 IGKV3D-20A0A0C4DH25 116 aa12.56□□□□□ -0.4
CHFR-224ENST00000545046 LINC00587B1AMM8 73 aa12.56□□□□□ -0.4
CHFR-224ENST00000545046 CD5LO43866 347 aa12.56□□□□□ -0.4
CHFR-224ENST00000545046 HOXD3P31249 432 aaPredicted RBP12.56□□□□□ -0.4
CHFR-224ENST00000545046 FAM104BQ5XKR9 115 aa12.56□□□□□ -0.4
CHFR-224ENST00000545046 WFDC3Q8IUB2 231 aa12.56□□□□□ -0.4
CHFR-224ENST00000545046 CHCHD1Q96BP2 118 aaKnown RBP12.56□□□□□ -0.4
CHFR-224ENST00000545046 C11orf21Q9P2W6 132 aa12.56□□□□□ -0.4
CHFR-224ENST00000545046 NBPF19A0A087WUL8 3843 aa12.56□□□□□ -0.4
CHFR-224ENST00000545046 M0R2Z0 102 aa12.56□□□□□ -0.4
CHFR-224ENST00000545046 KRTDAPP60985 99 aa12.56□□□□□ -0.4
CHFR-224ENST00000545046 DCANP1Q8TF63 244 aa12.56□□□□□ -0.4
CHFR-224ENST00000545046 YAE1D1Q9NRH1 226 aa12.56□□□□□ -0.4
CHFR-224ENST00000545046 PDZD2O15018 2839 aa12.55□□□□□ -0.4
CHFR-224ENST00000545046 DNAJC9-AS1A6NH13 148 aa12.54□□□□□ -0.4
CHFR-224ENST00000545046 F6UB75 175 aa12.54□□□□□ -0.4
CHFR-224ENST00000545046 LINC00614P0C842 121 aa12.54□□□□□ -0.4
CHFR-224ENST00000545046 DEFB1P60022 68 aa12.54□□□□□ -0.4
CHFR-224ENST00000545046 DMRTA1Q5VZB9 504 aa12.54□□□□□ -0.4
CHFR-224ENST00000545046 CNFNQ9BYD5 112 aa12.54□□□□□ -0.4
CHFR-224ENST00000545046 MS4A6AQ9H2W1 248 aa12.54□□□□□ -0.4
CHFR-224ENST00000545046 PRO1933Q9H354 126 aa12.54□□□□□ -0.4
CHFR-224ENST00000545046 J3KRW8 73 aa12.54□□□□□ -0.4
CHFR-224ENST00000545046 AMN1Q8IY45 258 aa12.54□□□□□ -0.4
CHFR-224ENST00000545046 URB1-AS1Q96HZ7 61 aa12.54□□□□□ -0.4
CHFR-224ENST00000545046 TRAV21A0A0B4J279 112 aa12.53□□□□□ -0.4
CHFR-224ENST00000545046 TRBV7-9A0A0J9YWB2 115 aa12.53□□□□□ -0.4
CHFR-224ENST00000545046 M0QZ24 198 aa12.53□□□□□ -0.4
CHFR-224ENST00000545046 PRR9Q5T870 116 aa12.53□□□□□ -0.4
CHFR-224ENST00000545046 ZNF664Q8N3J9 261 aa12.53□□□□□ -0.4
CHFR-224ENST00000545046 ZFAND2AQ8N6M9 145 aa12.53□□□□□ -0.4
CHFR-224ENST00000545046 TMEM191AQ9H0A3 160 aa12.53□□□□□ -0.4
CHFR-224ENST00000545046 KRTAP1-1Q07627 177 aa12.53□□□□□ -0.4
CHFR-224ENST00000545046 Q6ZSV7 163 aa12.53□□□□□ -0.4
CHFR-224ENST00000545046 FAM19A4Q96LR4 140 aa12.53□□□□□ -0.4
CHFR-224ENST00000545046 CSN3P07498 182 aa12.52□□□□□ -0.4
CHFR-224ENST00000545046 TFPI2P48307 235 aa12.52□□□□□ -0.4
CHFR-224ENST00000545046 MRPL51Q4U2R6 128 aaKnown RBP12.52□□□□□ -0.4
CHFR-224ENST00000545046 HELZ2Q9BYK8 2649 aaKnown RBP12.52□□□□□ -0.41
CHFR-224ENST00000545046 C2orf70A6NJV1 201 aa12.52□□□□□ -0.41
CHFR-224ENST00000545046 D6R8Y8 96 aa12.52□□□□□ -0.41
CHFR-224ENST00000545046 LINC01619G3V211 115 aa12.52□□□□□ -0.41
CHFR-224ENST00000545046 SNRPD3P62318 126 aaKnown RBP12.52□□□□□ -0.41
CHFR-224ENST00000545046 ORMDL3Q8N138 153 aa12.52□□□□□ -0.41
CHFR-224ENST00000545046 C4orf3Q8WVX3 66 aa12.52□□□□□ -0.41
CHFR-224ENST00000545046 DPF1Q92782 380 aa12.52□□□□□ -0.41
CHFR-224ENST00000545046 PRELID3AQ96N28 172 aa12.52□□□□□ -0.41
CHFR-224ENST00000545046 MSRB1Q9NZV6 116 aa12.52□□□□□ -0.41
CHFR-224ENST00000545046 RNF114Q9Y508 228 aa12.52□□□□□ -0.41
CHFR-224ENST00000545046 U3KQK5 164 aa12.52□□□□□ -0.41
CHFR-224ENST00000545046 FLNAP21333 2647 aaKnown RBP12.51□□□□□ -0.41
CHFR-224ENST00000545046 C3orf79P0CE67 100 aa12.51□□□□□ -0.41
CHFR-224ENST00000545046 RNASE4P34096 147 aaKnown RBP12.51□□□□□ -0.41
CHFR-224ENST00000545046 KHDC1LQ5JSQ8 128 aa12.51□□□□□ -0.41
CHFR-224ENST00000545046 Q6ZQT7 251 aa12.51□□□□□ -0.41
CHFR-224ENST00000545046 C18orf65Q6ZTR6 163 aa12.51□□□□□ -0.41
CHFR-224ENST00000545046 SLURP1P55000 103 aa12.5□□□□□ -0.41
CHFR-224ENST00000545046 DEFB136Q30KP8 78 aa12.5□□□□□ -0.41
CHFR-224ENST00000545046 PRSS3P2Q8NHM4 247 aa12.5□□□□□ -0.41
CHFR-224ENST00000545046 ZNF469Q96JG9 3925 aaPredicted RBP12.5□□□□□ -0.41
CHFR-224ENST00000545046 CCDC168Q8NDH2 2452 aa12.5□□□□□ -0.41
CHFR-224ENST00000545046 K7EQG2 157 aa12.5□□□□□ -0.41
CHFR-224ENST00000545046 RAB4AP20338 218 aa12.5□□□□□ -0.41
CHFR-224ENST00000545046 CKS2P33552 79 aa12.5□□□□□ -0.41
CHFR-224ENST00000545046 SCGB2A2Q13296 93 aa12.5□□□□□ -0.41
CHFR-224ENST00000545046 APRG1Q8IVJ8 170 aa12.5□□□□□ -0.41
CHFR-224ENST00000545046 OR11H1Q8NG94 326 aa12.5□□□□□ -0.41
CHFR-224ENST00000545046 IGHV1-24A0A0C4DH33 117 aa12.49□□□□□ -0.41
CHFR-224ENST00000545046 OR5AL1P0C617 328 aa12.49□□□□□ -0.41
CHFR-224ENST00000545046 ZNF688P0C7X2 276 aa12.49□□□□□ -0.41
CHFR-224ENST00000545046 TCTEX1D4Q5JR98 221 aa12.49□□□□□ -0.41
CHFR-224ENST00000545046 PSMG4Q5JS54 123 aa12.49□□□□□ -0.41
CHFR-224ENST00000545046 SMIM15Q7Z3B0 74 aa12.49□□□□□ -0.41
CHFR-224ENST00000545046 OR1N2Q8NGR9 330 aa12.49□□□□□ -0.41
CHFR-224ENST00000545046 TLN2Q9Y4G6 2542 aa12.49□□□□□ -0.41
CHFR-224ENST00000545046 SNAI2O43623 268 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms