RNA–Protein interactions for RNA: ENST00000544907.6

TNFAIP1-202, Transcript of TNF alpha induced protein 1, humanhuman

TSL 2 BASIC

Gene TNFAIP1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-202ENST00000544907 ST20Q9HBF5 79 aa13.8□□□□□ -0.2
TNFAIP1-202ENST00000544907 MRPS16Q9Y3D3 137 aaKnown RBP13.8□□□□□ -0.2
TNFAIP1-202ENST00000544907 TRBV7-9A0A0J9YWB2 115 aa13.79□□□□□ -0.2
TNFAIP1-202ENST00000544907 D6R8Y8 96 aa13.79□□□□□ -0.2
TNFAIP1-202ENST00000544907 TWIST1Q15672 202 aa13.79□□□□□ -0.2
TNFAIP1-202ENST00000544907 MRPL51Q4U2R6 128 aaKnown RBP13.79□□□□□ -0.2
TNFAIP1-202ENST00000544907 SAMD13Q5VXD3 122 aa13.79□□□□□ -0.2
TNFAIP1-202ENST00000544907 IL17RELQ6ZVW7 336 aa13.79□□□□□ -0.2
TNFAIP1-202ENST00000544907 LINC00477Q96M19 166 aa13.79□□□□□ -0.2
TNFAIP1-202ENST00000544907 MED13LQ71F56 2210 aa13.79□□□□□ -0.2
TNFAIP1-202ENST00000544907 PDZD2O15018 2839 aa13.79□□□□□ -0.2
TNFAIP1-202ENST00000544907 CSMD1Q96PZ7 3565 aa13.79□□□□□ -0.2
TNFAIP1-202ENST00000544907 IGHV3-66A0A0C4DH42 116 aa13.79□□□□□ -0.2
TNFAIP1-202ENST00000544907 OVOL1O14753 267 aa13.79□□□□□ -0.2
TNFAIP1-202ENST00000544907 AMN1Q8IY45 258 aa13.79□□□□□ -0.2
TNFAIP1-202ENST00000544907 C16orf92Q96LL3 132 aa13.79□□□□□ -0.2
TNFAIP1-202ENST00000544907 LINC01546A6NGU7 62 aa13.78□□□□□ -0.2
TNFAIP1-202ENST00000544907 OR4C46A6NHA9 309 aa13.78□□□□□ -0.2
TNFAIP1-202ENST00000544907 LY6EQ16553 131 aa13.78□□□□□ -0.2
TNFAIP1-202ENST00000544907 FOXC2Q99958 501 aa13.78□□□□□ -0.2
TNFAIP1-202ENST00000544907 NOTCH2Q04721 2471 aa13.77□□□□□ -0.2
TNFAIP1-202ENST00000544907 IGHV4-4A0A075B6R2 117 aa13.77□□□□□ -0.21
TNFAIP1-202ENST00000544907 A0A096LNT2 108 aa13.77□□□□□ -0.21
TNFAIP1-202ENST00000544907 K7EMT4 169 aa13.77□□□□□ -0.21
TNFAIP1-202ENST00000544907 SOCS3O14543 225 aa13.77□□□□□ -0.21
TNFAIP1-202ENST00000544907 Q5PR19 223 aa13.77□□□□□ -0.21
TNFAIP1-202ENST00000544907 LINC01545Q5VT33 79 aa13.77□□□□□ -0.21
TNFAIP1-202ENST00000544907 ZNF747Q9BV97 191 aa13.77□□□□□ -0.21
TNFAIP1-202ENST00000544907 SIGLEC8Q9NYZ4 499 aa13.77□□□□□ -0.21
TNFAIP1-202ENST00000544907 LINC00527Q9UJ94 153 aa13.77□□□□□ -0.21
TNFAIP1-202ENST00000544907 CKS2P33552 79 aa13.76□□□□□ -0.21
TNFAIP1-202ENST00000544907 HNRNPA3P51991 378 aaKnown RBP13.76□□□□□ -0.21
TNFAIP1-202ENST00000544907 PRR31Q5SQ13 230 aa13.76□□□□□ -0.21
TNFAIP1-202ENST00000544907 MS4A6AQ9H2W1 248 aa13.76□□□□□ -0.21
TNFAIP1-202ENST00000544907 IGKV3D-20A0A0C4DH25 116 aa13.75□□□□□ -0.21
TNFAIP1-202ENST00000544907 ZNF207O43670 478 aaKnown RBP13.75□□□□□ -0.21
TNFAIP1-202ENST00000544907 RPLP1P05386 114 aaKnown RBP13.75□□□□□ -0.21
TNFAIP1-202ENST00000544907 CSN3P07498 182 aa13.75□□□□□ -0.21
TNFAIP1-202ENST00000544907 PRB4P10163 310 aaPredicted RBP13.75□□□□□ -0.21
TNFAIP1-202ENST00000544907 IGLL1P15814 213 aa13.75□□□□□ -0.21
TNFAIP1-202ENST00000544907 UNQ9165/PRO28630Q6UXU0 137 aa13.75□□□□□ -0.21
TNFAIP1-202ENST00000544907 Q6ZN92 141 aa13.75□□□□□ -0.21
TNFAIP1-202ENST00000544907 OR4X2Q8NGF9 303 aa13.75□□□□□ -0.21
TNFAIP1-202ENST00000544907 TCF21O43680 179 aa13.75□□□□□ -0.21
TNFAIP1-202ENST00000544907 PF4V1P10720 104 aa13.75□□□□□ -0.21
TNFAIP1-202ENST00000544907 IFI27P40305 119 aaPredicted RBP13.75□□□□□ -0.21
TNFAIP1-202ENST00000544907 BLCAPP62952 87 aa13.75□□□□□ -0.21
TNFAIP1-202ENST00000544907 CACNG7P62955 275 aa13.75□□□□□ -0.21
TNFAIP1-202ENST00000544907 GPHB5Q86YW7 130 aa13.75□□□□□ -0.21
TNFAIP1-202ENST00000544907 DEFB125Q8N687 156 aa13.75□□□□□ -0.21
TNFAIP1-202ENST00000544907 RNF185Q96GF1 192 aa13.75□□□□□ -0.21
TNFAIP1-202ENST00000544907 IGHV3OR16-13A0A075B7E8 117 aa13.74□□□□□ -0.21
TNFAIP1-202ENST00000544907 IGHV3-74A0A0B4J1X5 117 aa13.74□□□□□ -0.21
TNFAIP1-202ENST00000544907 HSBP1L1C9JCN9 74 aa13.74□□□□□ -0.21
TNFAIP1-202ENST00000544907 SMAD7O15105 426 aaKnown RBP13.74□□□□□ -0.21
TNFAIP1-202ENST00000544907 SNAI2O43623 268 aa13.74□□□□□ -0.21
TNFAIP1-202ENST00000544907 AVPP01185 164 aa13.74□□□□□ -0.21
TNFAIP1-202ENST00000544907 TSPOP30536 169 aa13.74□□□□□ -0.21
TNFAIP1-202ENST00000544907 PRSS57Q6UWY2 283 aa13.74□□□□□ -0.21
TNFAIP1-202ENST00000544907 LINC00173Q6ZV60 143 aa13.74□□□□□ -0.21
TNFAIP1-202ENST00000544907 ATOH7Q8N100 152 aa13.74□□□□□ -0.21
TNFAIP1-202ENST00000544907 DAZ1Q9NQZ3 744 aaKnown RBP13.74□□□□□ -0.21
TNFAIP1-202ENST00000544907 CCDC168Q8NDH2 2452 aa13.74□□□□□ -0.21
TNFAIP1-202ENST00000544907 IGHV3-49A0A0A0MS15 119 aa13.73□□□□□ -0.21
TNFAIP1-202ENST00000544907 IGHV7-4-1A0A0J9YVY3 117 aa13.73□□□□□ -0.21
TNFAIP1-202ENST00000544907 TRBV12-3P01733 135 aa13.73□□□□□ -0.21
TNFAIP1-202ENST00000544907 LOXL1Q08397 574 aaPredicted RBP13.73□□□□□ -0.21
TNFAIP1-202ENST00000544907 OR10J6PQ8NGY7 276 aa13.73□□□□□ -0.21
TNFAIP1-202ENST00000544907 DPF1Q92782 380 aa13.73□□□□□ -0.21
TNFAIP1-202ENST00000544907 KLK15Q9H2R5 256 aa13.73□□□□□ -0.21
TNFAIP1-202ENST00000544907 COL5A1-AS1Q5SY13 56 aa13.72□□□□□ -0.21
TNFAIP1-202ENST00000544907 APRG1Q8IVJ8 170 aa13.72□□□□□ -0.21
TNFAIP1-202ENST00000544907 ZNF738Q8NE65 137 aa13.72□□□□□ -0.21
TNFAIP1-202ENST00000544907 NXT2Q9NPJ8 142 aaKnown RBP13.72□□□□□ -0.21
TNFAIP1-202ENST00000544907 PRRC2AP48634 2157 aaKnown RBP13.72□□□□□ -0.21
TNFAIP1-202ENST00000544907 A0A096LNJ9 63 aa13.72□□□□□ -0.21
TNFAIP1-202ENST00000544907 CYSRT1A8MQ03 144 aa13.72□□□□□ -0.21
TNFAIP1-202ENST00000544907 PRSS47A8MTI9 375 aa13.72□□□□□ -0.21
TNFAIP1-202ENST00000544907 HBDP02042 147 aa13.72□□□□□ -0.21
TNFAIP1-202ENST00000544907 SMIM15Q7Z3B0 74 aa13.72□□□□□ -0.21
TNFAIP1-202ENST00000544907 KRTAP1-3Q8IUG1 177 aa13.72□□□□□ -0.21
TNFAIP1-202ENST00000544907 FAM19A4Q96LR4 140 aa13.72□□□□□ -0.21
TNFAIP1-202ENST00000544907 MAP1LC3AQ9H492 121 aa13.72□□□□□ -0.21
TNFAIP1-202ENST00000544907 C11orf21Q9P2W6 132 aa13.72□□□□□ -0.21
TNFAIP1-202ENST00000544907 PEF1Q9UBV8 284 aaKnown RBP13.72□□□□□ -0.21
TNFAIP1-202ENST00000544907 TCAPO15273 167 aa13.71□□□□□ -0.21
TNFAIP1-202ENST00000544907 MED14OSP0DP75 135 aa13.71□□□□□ -0.21
TNFAIP1-202ENST00000544907 PSMB8P28062 276 aa13.71□□□□□ -0.21
TNFAIP1-202ENST00000544907 FOXE3Q13461 319 aa13.71□□□□□ -0.21
TNFAIP1-202ENST00000544907 MAJINQ3KP22 176 aa13.71□□□□□ -0.21
TNFAIP1-202ENST00000544907 FAM106AQ4KMX7 169 aa13.71□□□□□ -0.21
TNFAIP1-202ENST00000544907 Q96MF0 132 aa13.71□□□□□ -0.21
TNFAIP1-202ENST00000544907 NPYP01303 97 aa13.7□□□□□ -0.22
TNFAIP1-202ENST00000544907 C20orf173Q96LM9 149 aa13.7□□□□□ -0.22
TNFAIP1-202ENST00000544907 SMPXQ9UHP9 88 aa13.7□□□□□ -0.22
TNFAIP1-202ENST00000544907 TRAV21A0A0B4J279 112 aa13.69□□□□□ -0.22
TNFAIP1-202ENST00000544907 FSHBP01225 129 aa13.69□□□□□ -0.22
TNFAIP1-202ENST00000544907 LGALS9BQ3B8N2 356 aa13.69□□□□□ -0.22
TNFAIP1-202ENST00000544907 PSMG4Q5JS54 123 aa13.69□□□□□ -0.22
TNFAIP1-202ENST00000544907 LGALS9CQ6DKI2 356 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms