RNA–Protein interactions for RNA: ENST00000544513.1

SEMA4D-224, Transcript of semaphorin 4D, humanhuman

TSL 5

Gene SEMA4D, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-224ENST00000544513 NHLH2Q02577 135 aa9.43□□□□□ -0.9
SEMA4D-224ENST00000544513 MRPL23Q16540 153 aaKnown RBP9.43□□□□□ -0.9
SEMA4D-224ENST00000544513 IQCF2Q8IXL9 164 aa9.43□□□□□ -0.9
SEMA4D-224ENST00000544513 THAP6Q8TBB0 222 aa9.43□□□□□ -0.9
SEMA4D-224ENST00000544513 C8orf49Q96NF6 230 aa9.43□□□□□ -0.9
SEMA4D-224ENST00000544513 MRPL32Q9BYC8 188 aaKnown RBP9.43□□□□□ -0.9
SEMA4D-224ENST00000544513 OR51M1Q9H341 326 aa9.43□□□□□ -0.9
SEMA4D-224ENST00000544513 EPM2AB3EWF7 344 aa9.42□□□□□ -0.9
SEMA4D-224ENST00000544513 EREGO14944 169 aa9.42□□□□□ -0.9
SEMA4D-224ENST00000544513 PRAF2O60831 178 aa9.42□□□□□ -0.9
SEMA4D-224ENST00000544513 FUSP35637 526 aaKnown RBP eCLIP9.42□□□□□ -0.9
SEMA4D-224ENST00000544513 ERVFC1-1P60608 527 aa9.42□□□□□ -0.9
SEMA4D-224ENST00000544513 ZNF266Q14584 549 aa9.42□□□□□ -0.9
SEMA4D-224ENST00000544513 NEGR1Q7Z3B1 354 aa9.42□□□□□ -0.9
SEMA4D-224ENST00000544513 NFE4Q86UQ8 179 aa9.42□□□□□ -0.9
SEMA4D-224ENST00000544513 LYPD1Q8N2G4 141 aa9.42□□□□□ -0.9
SEMA4D-224ENST00000544513 OR5C1Q8NGR4 320 aa9.42□□□□□ -0.9
SEMA4D-224ENST00000544513 DNAH8Q96JB1 4490 aa9.42□□□□□ -0.9
SEMA4D-224ENST00000544513 A0A087WTM6 91 aa9.41□□□□□ -0.9
SEMA4D-224ENST00000544513 RBAKDNA6NC62 111 aa9.41□□□□□ -0.9
SEMA4D-224ENST00000544513 K7EP13 123 aa9.41□□□□□ -0.9
SEMA4D-224ENST00000544513 UPK1BO75841 260 aa9.41□□□□□ -0.9
SEMA4D-224ENST00000544513 ZNF415Q09FC8 603 aa9.41□□□□□ -0.9
SEMA4D-224ENST00000544513 Q8TAT8 98 aa9.41□□□□□ -0.9
SEMA4D-224ENST00000544513 RASL10AQ92737 203 aa9.41□□□□□ -0.9
SEMA4D-224ENST00000544513 PHYHIPLQ96FC7 376 aa9.41□□□□□ -0.9
SEMA4D-224ENST00000544513 ARPC5LQ9BPX5 153 aa9.41□□□□□ -0.9
SEMA4D-224ENST00000544513 PAXXQ9BUH6 204 aa9.41□□□□□ -0.9
SEMA4D-224ENST00000544513 MDFICQ9P1T7 246 aa9.41□□□□□ -0.9
SEMA4D-224ENST00000544513 FLG2Q5D862 2391 aaPredicted RBP9.4□□□□□ -0.9
SEMA4D-224ENST00000544513 TRAV9-2A0A087WT02 112 aa9.4□□□□□ -0.9
SEMA4D-224ENST00000544513 K7EQD1 137 aa9.4□□□□□ -0.9
SEMA4D-224ENST00000544513 OR10J4P0C629 311 aa9.4□□□□□ -0.9
SEMA4D-224ENST00000544513 DEFA1P59665 94 aa9.4□□□□□ -0.9
SEMA4D-224ENST00000544513 DEFA3P59666 94 aa9.4□□□□□ -0.9
SEMA4D-224ENST00000544513 KRTAP10-1P60331 282 aa9.4□□□□□ -0.9
SEMA4D-224ENST00000544513 Q6AWC8 147 aa9.4□□□□□ -0.9
SEMA4D-224ENST00000544513 OR10G4Q8NGN3 311 aa9.4□□□□□ -0.9
SEMA4D-224ENST00000544513 ZNF479Q96JC4 524 aa9.4□□□□□ -0.9
SEMA4D-224ENST00000544513 LY96Q9Y6Y9 160 aa9.4□□□□□ -0.9
SEMA4D-224ENST00000544513 FAM240BA0A1B0GVZ2 78 aa9.39□□□□□ -0.91
SEMA4D-224ENST00000544513 E5RGE8 158 aa9.39□□□□□ -0.91
SEMA4D-224ENST00000544513 H0YIZ8 118 aa9.39□□□□□ -0.91
SEMA4D-224ENST00000544513 DNAH10OSP0CZ25 163 aa9.39□□□□□ -0.91
SEMA4D-224ENST00000544513 SPXQ9BT56 116 aa9.39□□□□□ -0.91
SEMA4D-224ENST00000544513 WDR61Q9GZS3 305 aaKnown RBP9.39□□□□□ -0.91
SEMA4D-224ENST00000544513 SLC25A31Q9H0C2 315 aa9.39□□□□□ -0.91
SEMA4D-224ENST00000544513 KCNIP2Q9NS61 270 aa9.39□□□□□ -0.91
SEMA4D-224ENST00000544513 OR5AC2Q9NZP5 309 aa9.39□□□□□ -0.91
SEMA4D-224ENST00000544513 MSRB1Q9NZV6 116 aa9.39□□□□□ -0.91
SEMA4D-224ENST00000544513 TRGV4A0A0C4DH28 118 aa9.38□□□□□ -0.91
SEMA4D-224ENST00000544513 SFTA3P0C7M3 94 aa9.38□□□□□ -0.91
SEMA4D-224ENST00000544513 RANP62826 216 aaKnown RBP9.38□□□□□ -0.91
SEMA4D-224ENST00000544513 TDRG1Q3Y452 100 aa9.38□□□□□ -0.91
SEMA4D-224ENST00000544513 MUC21Q5SSG8 566 aa9.38□□□□□ -0.91
SEMA4D-224ENST00000544513 MZT2BQ6NZ67 158 aa9.38□□□□□ -0.91
SEMA4D-224ENST00000544513 WFDC10BQ8IUB3 73 aa9.38□□□□□ -0.91
SEMA4D-224ENST00000544513 NMES1Q9C002 83 aa9.38□□□□□ -0.91
SEMA4D-224ENST00000544513 LENEPQ9Y5L5 61 aa9.38□□□□□ -0.91
SEMA4D-224ENST00000544513 DIRC3C9JPN6 131 aa9.37□□□□□ -0.91
SEMA4D-224ENST00000544513 SIX6O95475 246 aa9.37□□□□□ -0.91
SEMA4D-224ENST00000544513 ORM1P02763 201 aa9.37□□□□□ -0.91
SEMA4D-224ENST00000544513 INAFM2P0DMQ5 153 aa9.37□□□□□ -0.91
SEMA4D-224ENST00000544513 GYPEP15421 78 aa9.37□□□□□ -0.91
SEMA4D-224ENST00000544513 SRIP30626 198 aa9.37□□□□□ -0.91
SEMA4D-224ENST00000544513 CSN1S1P47710 185 aa9.37□□□□□ -0.91
SEMA4D-224ENST00000544513 ASAH1Q13510 395 aa9.37□□□□□ -0.91
SEMA4D-224ENST00000544513 TMED6Q8WW62 240 aa9.37□□□□□ -0.91
SEMA4D-224ENST00000544513 OR7C2O60412 319 aa9.36□□□□□ -0.91
SEMA4D-224ENST00000544513 EVI2AP22794 236 aa9.36□□□□□ -0.91
SEMA4D-224ENST00000544513 TMEM183BQ1AE95 376 aa9.36□□□□□ -0.91
SEMA4D-224ENST00000544513 TMEM183AQ8IXX5 376 aa9.36□□□□□ -0.91
SEMA4D-224ENST00000544513 TRGV11A0A075B6L2 103 aa9.35□□□□□ -0.91
SEMA4D-224ENST00000544513 TRAV4A0A0B4J268 109 aa9.35□□□□□ -0.91
SEMA4D-224ENST00000544513 IFNA5P01569 189 aa9.35□□□□□ -0.91
SEMA4D-224ENST00000544513 TIRAPP58753 221 aa9.35□□□□□ -0.91
SEMA4D-224ENST00000544513 UBE2L3P68036 154 aaKnown RBP9.35□□□□□ -0.91
SEMA4D-224ENST00000544513 Q5VSD8 79 aa9.35□□□□□ -0.91
SEMA4D-224ENST00000544513 FAM159AQ6UWV7 190 aa9.35□□□□□ -0.91
SEMA4D-224ENST00000544513 PCNPQ8WW12 178 aaKnown RBP9.35□□□□□ -0.91
SEMA4D-224ENST00000544513 TXNDC17Q9BRA2 123 aa9.35□□□□□ -0.91
SEMA4D-224ENST00000544513 IGHV3-16A0A0C4DH30 117 aa9.34□□□□□ -0.91
SEMA4D-224ENST00000544513 C9JCJ5 164 aa9.34□□□□□ -0.91
SEMA4D-224ENST00000544513 C17orf112F2Z3M2 114 aa9.34□□□□□ -0.91
SEMA4D-224ENST00000544513 CRYGDP07320 174 aa9.34□□□□□ -0.91
SEMA4D-224ENST00000544513 CYCSP99999 105 aaKnown RBP9.34□□□□□ -0.91
SEMA4D-224ENST00000544513 IFITM3Q01628 133 aa9.34□□□□□ -0.91
SEMA4D-224ENST00000544513 ENKURQ8TC29 256 aa9.34□□□□□ -0.91
SEMA4D-224ENST00000544513 ATP5SQ99766 215 aa9.34□□□□□ -0.91
SEMA4D-224ENST00000544513 M0R2P5 195 aa9.33□□□□□ -0.92
SEMA4D-224ENST00000544513 GNRH2O43555 120 aa9.33□□□□□ -0.92
SEMA4D-224ENST00000544513 GCSHP23434 173 aa9.33□□□□□ -0.92
SEMA4D-224ENST00000544513 H2BFSP57053 126 aa9.33□□□□□ -0.92
SEMA4D-224ENST00000544513 LRRC37A5PQ49AS3 106 aa9.33□□□□□ -0.92
SEMA4D-224ENST00000544513 KHDC3LQ587J8 217 aa9.33□□□□□ -0.92
SEMA4D-224ENST00000544513 FFAR4Q5NUL3 377 aa9.33□□□□□ -0.92
SEMA4D-224ENST00000544513 SH2D6Q7Z4S9 175 aa9.33□□□□□ -0.92
SEMA4D-224ENST00000544513 C10orf126Q8N4M7 172 aa9.33□□□□□ -0.92
SEMA4D-224ENST00000544513 FRZBQ92765 325 aa9.33□□□□□ -0.92
SEMA4D-224ENST00000544513 OTORQ9NRC9 128 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms