RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 TMEM158Q8WZ71 300 aa11.9□□□□□ -0.5
CNOT9-208ENST00000542068 BPESC1Q9GZL8 116 aa11.9□□□□□ -0.5
CNOT9-208ENST00000542068 AGRNO00468 2067 aa11.9□□□□□ -0.5
CNOT9-208ENST00000542068 WI2-2373I1.2A0A1W2PRP0 233 aa11.9□□□□□ -0.5
CNOT9-208ENST00000542068 RPL7P18124 248 aaKnown RBP11.9□□□□□ -0.5
CNOT9-208ENST00000542068 RPL11P62913 178 aaKnown RBP11.9□□□□□ -0.5
CNOT9-208ENST00000542068 ZNF493Q6ZR52 646 aa11.9□□□□□ -0.5
CNOT9-208ENST00000542068 IL17RELQ6ZVW7 336 aa11.9□□□□□ -0.5
CNOT9-208ENST00000542068 LYPD1Q8N2G4 141 aa11.9□□□□□ -0.5
CNOT9-208ENST00000542068 K7EP34 96 aa11.89□□□□□ -0.51
CNOT9-208ENST00000542068 PRTN3P24158 256 aa11.89□□□□□ -0.51
CNOT9-208ENST00000542068 TNFRSF6BO95407 300 aa11.89□□□□□ -0.51
CNOT9-208ENST00000542068 CLEC3BP05452 202 aa11.89□□□□□ -0.51
CNOT9-208ENST00000542068 CLEC19AQ6UXS0 136 aa11.89□□□□□ -0.51
CNOT9-208ENST00000542068 BRD3OSQ6XYD6 125 aa11.89□□□□□ -0.51
CNOT9-208ENST00000542068 ADAMTSL5Q6ZMM2 481 aa11.89□□□□□ -0.51
CNOT9-208ENST00000542068 SMAD5-AS1Q9Y6J3 95 aa11.89□□□□□ -0.51
CNOT9-208ENST00000542068 TRGV3P03979 118 aa11.89□□□□□ -0.51
CNOT9-208ENST00000542068 FABP2P12104 132 aa11.89□□□□□ -0.51
CNOT9-208ENST00000542068 ZC2HC1BQ5TFG8 222 aa11.89□□□□□ -0.51
CNOT9-208ENST00000542068 SAMD5Q5TGI4 173 aa11.89□□□□□ -0.51
CNOT9-208ENST00000542068 OR1N2Q8NGR9 330 aa11.89□□□□□ -0.51
CNOT9-208ENST00000542068 LY6EQ16553 131 aa11.88□□□□□ -0.51
CNOT9-208ENST00000542068 C15orf32Q32M92 178 aa11.88□□□□□ -0.51
CNOT9-208ENST00000542068 TRAV40A0A0B4J280 105 aa11.88□□□□□ -0.51
CNOT9-208ENST00000542068 A0A1W2PPM0 123 aa11.88□□□□□ -0.51
CNOT9-208ENST00000542068 F8W735 103 aaPredicted RBP11.88□□□□□ -0.51
CNOT9-208ENST00000542068 SMIM13P0DJ93 91 aa11.87□□□□□ -0.51
CNOT9-208ENST00000542068 BMI1P35226 326 aa11.87□□□□□ -0.51
CNOT9-208ENST00000542068 LINC01548A6NM66 108 aa11.87□□□□□ -0.51
CNOT9-208ENST00000542068 NDUFA3O95167 84 aa11.87□□□□□ -0.51
CNOT9-208ENST00000542068 CCDC144NLQ6NUI1 221 aa11.87□□□□□ -0.51
CNOT9-208ENST00000542068 UFSP1Q6NVU6 142 aa11.87□□□□□ -0.51
CNOT9-208ENST00000542068 OR9G4Q8NGQ1 327 aa11.87□□□□□ -0.51
CNOT9-208ENST00000542068 UTP20O75691 2785 aaKnown RBP11.87□□□□□ -0.51
CNOT9-208ENST00000542068 IGLV11-55A0A075B6I3 123 aa11.87□□□□□ -0.51
CNOT9-208ENST00000542068 TMEM8BA6NDV4 472 aa11.87□□□□□ -0.51
CNOT9-208ENST00000542068 LY6LH3BQJ8 138 aa11.87□□□□□ -0.51
CNOT9-208ENST00000542068 EFNA4P52798 201 aa11.87□□□□□ -0.51
CNOT9-208ENST00000542068 CFHR4Q92496 578 aa11.87□□□□□ -0.51
CNOT9-208ENST00000542068 RNF185Q96GF1 192 aa11.87□□□□□ -0.51
CNOT9-208ENST00000542068 CUBNO60494 3623 aa11.87□□□□□ -0.51
CNOT9-208ENST00000542068 TRBV6-1A0A0K0K1D8 114 aa11.86□□□□□ -0.51
CNOT9-208ENST00000542068 SAA4P35542 130 aa11.86□□□□□ -0.51
CNOT9-208ENST00000542068 OR4X2Q8NGF9 303 aa11.86□□□□□ -0.51
CNOT9-208ENST00000542068 U3KQK5 164 aa11.86□□□□□ -0.51
CNOT9-208ENST00000542068 FABP5P3A8MUU1 101 aa11.86□□□□□ -0.51
CNOT9-208ENST00000542068 CTSGP08311 255 aa11.86□□□□□ -0.51
CNOT9-208ENST00000542068 SFTA2Q6UW10 78 aa11.86□□□□□ -0.51
CNOT9-208ENST00000542068 ZNF562Q6V9R5 426 aa11.86□□□□□ -0.51
CNOT9-208ENST00000542068 CHAC1Q9BUX1 264 aa11.86□□□□□ -0.51
CNOT9-208ENST00000542068 NAV2Q8IVL1 2488 aa11.85□□□□□ -0.51
CNOT9-208ENST00000542068 PAX2Q02962 417 aa11.85□□□□□ -0.51
CNOT9-208ENST00000542068 DTX2Q86UW9 622 aa11.85□□□□□ -0.51
CNOT9-208ENST00000542068 WNK1Q9H4A3 2382 aa11.85□□□□□ -0.51
CNOT9-208ENST00000542068 ATP6V0E1O15342 81 aa11.85□□□□□ -0.51
CNOT9-208ENST00000542068 IGKCP01834 107 aa11.85□□□□□ -0.51
CNOT9-208ENST00000542068 IGHG4P01861 327 aa11.85□□□□□ -0.51
CNOT9-208ENST00000542068 PDE6HQ13956 83 aa11.85□□□□□ -0.51
CNOT9-208ENST00000542068 ODF1Q14990 250 aa11.85□□□□□ -0.51
CNOT9-208ENST00000542068 AMTNQ6UX39 209 aa11.85□□□□□ -0.51
CNOT9-208ENST00000542068 S100A7AQ86SG5 101 aa11.85□□□□□ -0.51
CNOT9-208ENST00000542068 MRPL35Q9NZE8 188 aaKnown RBP11.85□□□□□ -0.51
CNOT9-208ENST00000542068 GNLYP22749 145 aa11.84□□□□□ -0.51
CNOT9-208ENST00000542068 DEFB1P60022 68 aa11.84□□□□□ -0.51
CNOT9-208ENST00000542068 RPS20P60866 119 aaKnown RBP11.84□□□□□ -0.51
CNOT9-208ENST00000542068 HIF1ANQ9NWT6 349 aa11.84□□□□□ -0.51
CNOT9-208ENST00000542068 UCNP55089 124 aa11.84□□□□□ -0.51
CNOT9-208ENST00000542068 OR11H6Q8NGC7 330 aa11.84□□□□□ -0.51
CNOT9-208ENST00000542068 ZFHX3Q15911 3703 aa11.84□□□□□ -0.51
CNOT9-208ENST00000542068 CFAP46Q8IYW2 2715 aa11.84□□□□□ -0.51
CNOT9-208ENST00000542068 TEX48A0A1B0GUV7 120 aa11.84□□□□□ -0.51
CNOT9-208ENST00000542068 SMIM17P0DL12 118 aa11.84□□□□□ -0.51
CNOT9-208ENST00000542068 GATD1Q8NB37 220 aa11.84□□□□□ -0.51
CNOT9-208ENST00000542068 IGHV3-11P01762 117 aa11.83□□□□□ -0.52
CNOT9-208ENST00000542068 NPFFR1Q9GZQ6 430 aa11.83□□□□□ -0.52
CNOT9-208ENST00000542068 C11orf21Q9P2W6 132 aa11.83□□□□□ -0.52
CNOT9-208ENST00000542068 EPG5Q9HCE0 2579 aa11.83□□□□□ -0.52
CNOT9-208ENST00000542068 TRBV25-1A0A075B6N4 114 aa11.83□□□□□ -0.52
CNOT9-208ENST00000542068 IGLC6P0CF74 106 aa11.83□□□□□ -0.52
CNOT9-208ENST00000542068 SPANXN1Q5VSR9 72 aa11.83□□□□□ -0.52
CNOT9-208ENST00000542068 ITPR1Q14643 2758 aa11.83□□□□□ -0.52
CNOT9-208ENST00000542068 SCGB2A1O75556 95 aa11.82□□□□□ -0.52
CNOT9-208ENST00000542068 PAX8Q06710 450 aa11.82□□□□□ -0.52
CNOT9-208ENST00000542068 MAPKAPK5-AS1Q8N8E1 139 aa11.82□□□□□ -0.52
CNOT9-208ENST00000542068 GTSF1LQ9H1H1 148 aa11.82□□□□□ -0.52
CNOT9-208ENST00000542068 ZNF462Q96JM2 2506 aa11.82□□□□□ -0.52
CNOT9-208ENST00000542068 IGHV7-81A0A0B4J1V7 117 aa11.82□□□□□ -0.52
CNOT9-208ENST00000542068 G3V4G9 280 aa11.82□□□□□ -0.52
CNOT9-208ENST00000542068 LY6G5BQ8NDX9 201 aa11.82□□□□□ -0.52
CNOT9-208ENST00000542068 TMEM238C9JI98 176 aa11.82□□□□□ -0.52
CNOT9-208ENST00000542068 ZNF575Q86XF7 245 aa11.82□□□□□ -0.52
CNOT9-208ENST00000542068 RNF5Q99942 180 aa11.82□□□□□ -0.52
CNOT9-208ENST00000542068 HHLA3Q9XRX5 114 aa11.82□□□□□ -0.52
CNOT9-208ENST00000542068 IGKV3D-20A0A0C4DH25 116 aa11.81□□□□□ -0.52
CNOT9-208ENST00000542068 M0R1W7 72 aa11.81□□□□□ -0.52
CNOT9-208ENST00000542068 DPM2O94777 84 aa11.81□□□□□ -0.52
CNOT9-208ENST00000542068 H3BVH4 76 aa11.81□□□□□ -0.52
CNOT9-208ENST00000542068 C19orf84I3L1E1 186 aa11.81□□□□□ -0.52
CNOT9-208ENST00000542068 M0R381 172 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms