RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 FAM90A26D6RGX4 464 aa5.35□□□□□ -1.55
LMO3-220ENST00000539232 K7EMT4 169 aa5.35□□□□□ -1.55
LMO3-220ENST00000539232 GNG7O60262 68 aa5.35□□□□□ -1.55
LMO3-220ENST00000539232 GPX1P07203 203 aa5.35□□□□□ -1.55
LMO3-220ENST00000539232 IGLC1P0CG04 106 aa5.35□□□□□ -1.55
LMO3-220ENST00000539232 TSPOP30536 169 aa5.35□□□□□ -1.55
LMO3-220ENST00000539232 OPRK1P41145 380 aa5.35□□□□□ -1.55
LMO3-220ENST00000539232 RNF151Q2KHN1 245 aa5.35□□□□□ -1.55
LMO3-220ENST00000539232 CST9LP1Q5W188 147 aa5.35□□□□□ -1.55
LMO3-220ENST00000539232 MRPL54Q6P161 138 aaKnown RBP5.35□□□□□ -1.55
LMO3-220ENST00000539232 GTSCR1Q86UQ5 136 aa5.35□□□□□ -1.55
LMO3-220ENST00000539232 WFDC3Q8IUB2 231 aa5.35□□□□□ -1.55
LMO3-220ENST00000539232 TMEM116Q8NCL8 245 aa5.35□□□□□ -1.55
LMO3-220ENST00000539232 GNB1LQ9BYB4 327 aa5.35□□□□□ -1.55
LMO3-220ENST00000539232 SAMD10Q9BYL1 202 aa5.35□□□□□ -1.55
LMO3-220ENST00000539232 UBR4Q5T4S7 5183 aa5.34□□□□□ -1.55
LMO3-220ENST00000539232 CORTO00230 105 aa5.34□□□□□ -1.55
LMO3-220ENST00000539232 SSSCA1O60232 199 aa5.34□□□□□ -1.55
LMO3-220ENST00000539232 RPL35AP18077 110 aaKnown RBP5.34□□□□□ -1.55
LMO3-220ENST00000539232 NPY1RP25929 384 aa5.34□□□□□ -1.55
LMO3-220ENST00000539232 VAMP3Q15836 100 aa5.34□□□□□ -1.55
LMO3-220ENST00000539232 RBPMS2Q6ZRY4 209 aaKnown RBP5.34□□□□□ -1.55
LMO3-220ENST00000539232 TMEM256Q8N2U0 113 aa5.34□□□□□ -1.55
LMO3-220ENST00000539232 ZNF709Q8N972 641 aa5.34□□□□□ -1.55
LMO3-220ENST00000539232 KCNS1Q96KK3 526 aa5.34□□□□□ -1.55
LMO3-220ENST00000539232 ATP6V0BQ99437 205 aa5.34□□□□□ -1.55
LMO3-220ENST00000539232 PMCHL2Q9BQD1 86 aa5.34□□□□□ -1.55
LMO3-220ENST00000539232 OVOL2Q9BRP0 275 aa5.34□□□□□ -1.55
LMO3-220ENST00000539232 VSIRQ9H7M9 311 aa5.34□□□□□ -1.55
LMO3-220ENST00000539232 ENY2Q9NPA8 101 aa5.34□□□□□ -1.55
LMO3-220ENST00000539232 KCNIP2Q9NS61 270 aa5.34□□□□□ -1.55
LMO3-220ENST00000539232 HECTD4Q9Y4D8 3996 aa5.33□□□□□ -1.56
LMO3-220ENST00000539232 IGKV1OR2-108A0A075B7D4 117 aa5.33□□□□□ -1.56
LMO3-220ENST00000539232 TRAV9-2A0A087WT02 112 aa5.33□□□□□ -1.56
LMO3-220ENST00000539232 TRAV25A0A0B4J276 109 aa5.33□□□□□ -1.56
LMO3-220ENST00000539232 PRSS46E5RG02 174 aa5.33□□□□□ -1.56
LMO3-220ENST00000539232 SUB1P53999 127 aaKnown RBP eCLIP5.33□□□□□ -1.56
LMO3-220ENST00000539232 DEFB1P60022 68 aa5.33□□□□□ -1.56
LMO3-220ENST00000539232 ZNF90Q03938 601 aa5.33□□□□□ -1.56
LMO3-220ENST00000539232 FAM78BQ5VT40 261 aa5.33□□□□□ -1.56
LMO3-220ENST00000539232 CFAP161Q6P656 301 aa5.33□□□□□ -1.56
LMO3-220ENST00000539232 RASL11AQ6T310 242 aa5.33□□□□□ -1.56
LMO3-220ENST00000539232 C16orf54Q6UWD8 224 aa5.33□□□□□ -1.56
LMO3-220ENST00000539232 GTF2H5Q6ZYL4 71 aa5.33□□□□□ -1.56
LMO3-220ENST00000539232 BAGE3Q86Y29 109 aa5.33□□□□□ -1.56
LMO3-220ENST00000539232 BAGE2Q86Y30 109 aa5.33□□□□□ -1.56
LMO3-220ENST00000539232 Q8N976 141 aa5.33□□□□□ -1.56
LMO3-220ENST00000539232 OR10G8Q8NGN5 311 aa5.33□□□□□ -1.56
LMO3-220ENST00000539232 SFRP2Q96HF1 295 aa5.33□□□□□ -1.56
LMO3-220ENST00000539232 SPAG8Q99932 426 aaPredicted RBP5.33□□□□□ -1.56
LMO3-220ENST00000539232 WDR61Q9GZS3 305 aaKnown RBP5.33□□□□□ -1.56
LMO3-220ENST00000539232 MS4A6AQ9H2W1 248 aa5.33□□□□□ -1.56
LMO3-220ENST00000539232 ST20Q9HBF5 79 aa5.33□□□□□ -1.56
LMO3-220ENST00000539232 IL36BQ9NZH7 164 aa5.33□□□□□ -1.56
LMO3-220ENST00000539232 U3KQE9 123 aa5.33□□□□□ -1.56
LMO3-220ENST00000539232 ARL2-SNX15V9GYD0 113 aa5.33□□□□□ -1.56
LMO3-220ENST00000539232 PLECQ15149 4684 aaKnown RBP5.32□□□□□ -1.56
LMO3-220ENST00000539232 KNCNA6PVL3 124 aa5.32□□□□□ -1.56
LMO3-220ENST00000539232 H3BP45 60 aa5.32□□□□□ -1.56
LMO3-220ENST00000539232 SERF1AO75920 110 aa5.32□□□□□ -1.56
LMO3-220ENST00000539232 GIG44P09565 113 aaPredicted RBP5.32□□□□□ -1.56
LMO3-220ENST00000539232 MED14OSP0DP75 135 aa5.32□□□□□ -1.56
LMO3-220ENST00000539232 CRYBB3P26998 211 aa5.32□□□□□ -1.56
LMO3-220ENST00000539232 FGF8P55075 233 aaPredicted RBP5.32□□□□□ -1.56
LMO3-220ENST00000539232 PAX9P55771 341 aa5.32□□□□□ -1.56
LMO3-220ENST00000539232 ZNF726P1Q15940 193 aa5.32□□□□□ -1.56
LMO3-220ENST00000539232 LCN15Q6UWW0 184 aa5.32□□□□□ -1.56
LMO3-220ENST00000539232 OR10P1Q8NGE3 313 aa5.32□□□□□ -1.56
LMO3-220ENST00000539232 BORCS7Q96B45 105 aa5.32□□□□□ -1.56
LMO3-220ENST00000539232 C17orf77Q96MU5 243 aa5.32□□□□□ -1.56
LMO3-220ENST00000539232 SPATA25Q9BR10 227 aa5.32□□□□□ -1.56
LMO3-220ENST00000539232 GGTLC1Q9BX51 225 aa5.32□□□□□ -1.56
LMO3-220ENST00000539232 KRTAP4-5Q9BYR2 181 aa5.32□□□□□ -1.56
LMO3-220ENST00000539232 MRPL18Q9H0U6 180 aaKnown RBP5.32□□□□□ -1.56
LMO3-220ENST00000539232 MAP6D1Q9H9H5 199 aa5.32□□□□□ -1.56
LMO3-220ENST00000539232 NRN1Q9NPD7 142 aa5.32□□□□□ -1.56
LMO3-220ENST00000539232 HERC1Q15751 4861 aa5.32□□□□□ -1.56
LMO3-220ENST00000539232 ZNF324O75467 553 aaPredicted RBP5.31□□□□□ -1.56
LMO3-220ENST00000539232 CST7O76096 145 aa5.31□□□□□ -1.56
LMO3-220ENST00000539232 HLA-DQA1P01909 254 aa5.31□□□□□ -1.56
LMO3-220ENST00000539232 OR10J4P0C629 311 aa5.31□□□□□ -1.56
LMO3-220ENST00000539232 LINC00869P0C866 280 aa5.31□□□□□ -1.56
LMO3-220ENST00000539232 PRB4P10163 310 aaPredicted RBP5.31□□□□□ -1.56
LMO3-220ENST00000539232 PSG1P11464 419 aa5.31□□□□□ -1.56
LMO3-220ENST00000539232 GATA2P23769 480 aaPredicted RBP5.31□□□□□ -1.56
LMO3-220ENST00000539232 DEFB131AP59861 70 aa5.31□□□□□ -1.56
LMO3-220ENST00000539232 ARL16Q0P5N6 197 aa5.31□□□□□ -1.56
LMO3-220ENST00000539232 DEFB135Q30KP9 77 aa5.31□□□□□ -1.56
LMO3-220ENST00000539232 GLMPQ8WWB7 406 aa5.31□□□□□ -1.56
LMO3-220ENST00000539232 SSBP4Q9BWG4 385 aaPredicted RBP5.31□□□□□ -1.56
LMO3-220ENST00000539232 ZMAT4Q9H898 229 aa5.31□□□□□ -1.56
LMO3-220ENST00000539232 TP53TG3Q9ULZ0 132 aa5.31□□□□□ -1.56
LMO3-220ENST00000539232 ALMS1Q8TCU4 4167 aa5.3□□□□□ -1.56
LMO3-220ENST00000539232 LOC102724200A0A096LPH7 203 aaPredicted RBP5.3□□□□□ -1.56
LMO3-220ENST00000539232 GAGE12BA1L429 117 aa5.3□□□□□ -1.56
LMO3-220ENST00000539232 OR4C46A6NHA9 309 aa5.3□□□□□ -1.56
LMO3-220ENST00000539232 PMS2P5A8MQ11 134 aa5.3□□□□□ -1.56
LMO3-220ENST00000539232 C9JCJ5 164 aa5.3□□□□□ -1.56
LMO3-220ENST00000539232 K7EQG2 157 aa5.3□□□□□ -1.56
LMO3-220ENST00000539232 SYNGR2O43760 224 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms