RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 CYYR1Q96J86 154 aa13.32□□□□□ -0.28
SCARB1-205ENST00000538291 MRPL53Q96EL3 112 aaKnown RBP13.31□□□□□ -0.28
SCARB1-205ENST00000538291 NDUFA12Q9UI09 145 aa13.31□□□□□ -0.28
SCARB1-205ENST00000538291 K7EM74 188 aa13.31□□□□□ -0.28
SCARB1-205ENST00000538291 CD5LO43866 347 aa13.31□□□□□ -0.28
SCARB1-205ENST00000538291 C8orf31Q8N9H6 132 aa13.31□□□□□ -0.28
SCARB1-205ENST00000538291 VOPP1Q96AW1 172 aa13.31□□□□□ -0.28
SCARB1-205ENST00000538291 WISP1O95388 367 aa13.3□□□□□ -0.28
SCARB1-205ENST00000538291 SCRT2Q9NQ03 307 aa13.3□□□□□ -0.28
SCARB1-205ENST00000538291 HERVK_113P63121 156 aa13.3□□□□□ -0.28
SCARB1-205ENST00000538291 C9orf66Q5T8R8 295 aa13.3□□□□□ -0.28
SCARB1-205ENST00000538291 IGKV2D-24A0A075B6R9 120 aa13.3□□□□□ -0.28
SCARB1-205ENST00000538291 GRNP28799 593 aaKnown RBP13.3□□□□□ -0.28
SCARB1-205ENST00000538291 SIP14410 1827 aa13.3□□□□□ -0.28
SCARB1-205ENST00000538291 VWA8A3KMH1 1905 aa13.29□□□□□ -0.28
SCARB1-205ENST00000538291 TRAV25A0A0B4J276 109 aa13.29□□□□□ -0.28
SCARB1-205ENST00000538291 TAL2Q16559 108 aa13.29□□□□□ -0.28
SCARB1-205ENST00000538291 SMIM2Q9BVW6 85 aa13.29□□□□□ -0.28
SCARB1-205ENST00000538291 NOP10Q9NPE3 64 aaKnown RBP13.29□□□□□ -0.28
SCARB1-205ENST00000538291 A8MWP6 167 aa13.29□□□□□ -0.28
SCARB1-205ENST00000538291 IGKV1OR2-108A0A075B7D4 117 aa13.29□□□□□ -0.28
SCARB1-205ENST00000538291 A0A0J9YY99 117 aa13.29□□□□□ -0.28
SCARB1-205ENST00000538291 UBE2BP63146 152 aa13.29□□□□□ -0.28
SCARB1-205ENST00000538291 FNDC1Q4ZHG4 1894 aaPredicted RBP13.29□□□□□ -0.28
SCARB1-205ENST00000538291 POU2AF1Q16633 256 aa13.28□□□□□ -0.28
SCARB1-205ENST00000538291 ZNF491Q8N8L2 437 aa13.28□□□□□ -0.28
SCARB1-205ENST00000538291 PYGO2Q9BRQ0 406 aa13.28□□□□□ -0.28
SCARB1-205ENST00000538291 A0A1B0GUS0 222 aa13.28□□□□□ -0.28
SCARB1-205ENST00000538291 RSPO1Q2MKA7 263 aaPredicted RBP13.28□□□□□ -0.28
SCARB1-205ENST00000538291 IGHV4-61A0A0C4DH41 118 aa13.27□□□□□ -0.28
SCARB1-205ENST00000538291 CLPSL2Q6UWE3 100 aa13.27□□□□□ -0.28
SCARB1-205ENST00000538291 ZC2HC1AQ96GY0 325 aa13.27□□□□□ -0.28
SCARB1-205ENST00000538291 CTSZQ9UBR2 303 aa13.27□□□□□ -0.28
SCARB1-205ENST00000538291 KLF2Q9Y5W3 355 aaPredicted RBP13.27□□□□□ -0.28
SCARB1-205ENST00000538291 FOXE3Q13461 319 aa13.27□□□□□ -0.29
SCARB1-205ENST00000538291 PYY3Q5JQD4 70 aa13.27□□□□□ -0.29
SCARB1-205ENST00000538291 C20orf78Q9BR46 151 aa13.27□□□□□ -0.29
SCARB1-205ENST00000538291 FXYD5Q96DB9 178 aa13.26□□□□□ -0.29
SCARB1-205ENST00000538291 U3KQE9 123 aa13.26□□□□□ -0.29
SCARB1-205ENST00000538291 PCNX1Q96RV3 2341 aa13.26□□□□□ -0.29
SCARB1-205ENST00000538291 CENPVL3A0A0U1RRI6 287 aa13.26□□□□□ -0.29
SCARB1-205ENST00000538291 CRLF1O75462 422 aa13.26□□□□□ -0.29
SCARB1-205ENST00000538291 PKIGQ9Y2B9 76 aa13.26□□□□□ -0.29
SCARB1-205ENST00000538291 TCF15Q12870 199 aa13.26□□□□□ -0.29
SCARB1-205ENST00000538291 MRPL52Q86TS9 123 aaKnown RBP13.26□□□□□ -0.29
SCARB1-205ENST00000538291 OR11H6Q8NGC7 330 aa13.26□□□□□ -0.29
SCARB1-205ENST00000538291 DKK4Q9UBT3 224 aa13.26□□□□□ -0.29
SCARB1-205ENST00000538291 ANK1P16157 1881 aa13.26□□□□□ -0.29
SCARB1-205ENST00000538291 TRBV20-1A0A075B6N2 111 aa13.25□□□□□ -0.29
SCARB1-205ENST00000538291 TEX48A0A1B0GUV7 120 aa13.25□□□□□ -0.29
SCARB1-205ENST00000538291 DEFB136Q30KP8 78 aa13.25□□□□□ -0.29
SCARB1-205ENST00000538291 UBL5Q9BZL1 73 aa13.25□□□□□ -0.29
SCARB1-205ENST00000538291 PIFOQ8TCI5 191 aa13.25□□□□□ -0.29
SCARB1-205ENST00000538291 UBE2WQ96B02 151 aa13.25□□□□□ -0.29
SCARB1-205ENST00000538291 V9GYV3 84 aa13.25□□□□□ -0.29
SCARB1-205ENST00000538291 TICRRQ7Z2Z1 1910 aa13.25□□□□□ -0.29
SCARB1-205ENST00000538291 PLXNA3P51805 1871 aa13.25□□□□□ -0.29
SCARB1-205ENST00000538291 PRB1P04280 392 aa13.25□□□□□ -0.29
SCARB1-205ENST00000538291 ADCYAP1P18509 176 aa13.25□□□□□ -0.29
SCARB1-205ENST00000538291 WT1P19544 449 aaPredicted RBP13.25□□□□□ -0.29
SCARB1-205ENST00000538291 ZNF524Q96C55 264 aa13.25□□□□□ -0.29
SCARB1-205ENST00000538291 IGHV4-30-2A0A087WSY4 118 aa13.24□□□□□ -0.29
SCARB1-205ENST00000538291 TRAV13-2A0A0B4J235 113 aa13.24□□□□□ -0.29
SCARB1-205ENST00000538291 SMIM27A0A1W2PRY6 76 aa13.24□□□□□ -0.29
SCARB1-205ENST00000538291 F6UB75 175 aa13.24□□□□□ -0.29
SCARB1-205ENST00000538291 DLEU1O43261 78 aa13.24□□□□□ -0.29
SCARB1-205ENST00000538291 GP9P14770 177 aa13.24□□□□□ -0.29
SCARB1-205ENST00000538291 ZNF726P1Q15940 193 aa13.24□□□□□ -0.29
SCARB1-205ENST00000538291 IGF2-ASQ6U949 168 aa13.24□□□□□ -0.29
SCARB1-205ENST00000538291 IGFL2Q6UWQ7 119 aa13.24□□□□□ -0.29
SCARB1-205ENST00000538291 NPYP01303 97 aa13.24□□□□□ -0.29
SCARB1-205ENST00000538291 ADAMTSL5Q6ZMM2 481 aa13.24□□□□□ -0.29
SCARB1-205ENST00000538291 SIGLEC8Q9NYZ4 499 aa13.24□□□□□ -0.29
SCARB1-205ENST00000538291 C1orf43Q9BWL3 253 aa13.23□□□□□ -0.29
SCARB1-205ENST00000538291 Q9HAA7 133 aa13.23□□□□□ -0.29
SCARB1-205ENST00000538291 IGLC7A0M8Q6 106 aa13.23□□□□□ -0.29
SCARB1-205ENST00000538291 LENEPQ9Y5L5 61 aa13.23□□□□□ -0.29
SCARB1-205ENST00000538291 XCL1P47992 114 aa13.23□□□□□ -0.29
SCARB1-205ENST00000538291 UBE2V1Q13404 147 aa13.23□□□□□ -0.29
SCARB1-205ENST00000538291 F8VRH5 84 aa13.23□□□□□ -0.29
SCARB1-205ENST00000538291 LGALS9BQ3B8N2 356 aa13.22□□□□□ -0.29
SCARB1-205ENST00000538291 LGALS9CQ6DKI2 356 aa13.22□□□□□ -0.29
SCARB1-205ENST00000538291 ZNF664Q8N3J9 261 aa13.22□□□□□ -0.29
SCARB1-205ENST00000538291 MRPL35Q9NZE8 188 aaKnown RBP13.22□□□□□ -0.29
SCARB1-205ENST00000538291 SPINK8P0C7L1 97 aa13.22□□□□□ -0.29
SCARB1-205ENST00000538291 HAMPP81172 84 aa13.22□□□□□ -0.29
SCARB1-205ENST00000538291 DSCR8Q96T75 97 aa13.22□□□□□ -0.29
SCARB1-205ENST00000538291 IGLV2-23P01705 113 aa13.22□□□□□ -0.29
SCARB1-205ENST00000538291 IGHV4-38-2P0DP08 117 aa13.22□□□□□ -0.29
SCARB1-205ENST00000538291 AGPAT4-IT1Q9H0P7 198 aa13.22□□□□□ -0.29
SCARB1-205ENST00000538291 C9JQL5 133 aa13.21□□□□□ -0.29
SCARB1-205ENST00000538291 MORN5Q5VZ52 161 aa13.21□□□□□ -0.29
SCARB1-205ENST00000538291 DYNAPQ8N1N2 210 aa13.21□□□□□ -0.29
SCARB1-205ENST00000538291 SLURP1P55000 103 aa13.21□□□□□ -0.29
SCARB1-205ENST00000538291 ATRXP46100 2492 aa13.21□□□□□ -0.29
SCARB1-205ENST00000538291 GNRH2O43555 120 aa13.21□□□□□ -0.29
SCARB1-205ENST00000538291 IGLV3-1P01715 115 aa13.21□□□□□ -0.29
SCARB1-205ENST00000538291 RBAKDNA6NC62 111 aa13.21□□□□□ -0.3
SCARB1-205ENST00000538291 SPART-AS1P0CW21 52 aa13.21□□□□□ -0.3
SCARB1-205ENST00000538291 CCL18P55774 89 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms