RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 CSMD2Q7Z408 3487 aa8.3□□□□□ -1.08
CLIP1-210ENST00000538120 GPR183P32249 361 aa8.3□□□□□ -1.08
CLIP1-210ENST00000538120 LY6EQ16553 131 aa8.3□□□□□ -1.08
CLIP1-210ENST00000538120 BVES-AS1Q5T3Y7 98 aa8.3□□□□□ -1.08
CLIP1-210ENST00000538120 ZC2HC1AQ96GY0 325 aa8.3□□□□□ -1.08
CLIP1-210ENST00000538120 FMC1Q96HJ9 113 aa8.3□□□□□ -1.08
CLIP1-210ENST00000538120 LINC00527Q9UJ94 153 aa8.3□□□□□ -1.08
CLIP1-210ENST00000538120 LOC102724200A0A096LPH7 203 aaPredicted RBP8.29□□□□□ -1.08
CLIP1-210ENST00000538120 H3BUX3 64 aa8.29□□□□□ -1.08
CLIP1-210ENST00000538120 ST20Q9HBF5 79 aa8.29□□□□□ -1.08
CLIP1-210ENST00000538120 A0A087X0K7 114 aa8.29□□□□□ -1.08
CLIP1-210ENST00000538120 TRAV41A0A0B4J266 112 aa8.29□□□□□ -1.08
CLIP1-210ENST00000538120 IGHV3-35A0A0C4DH35 117 aa8.29□□□□□ -1.08
CLIP1-210ENST00000538120 SNAI2O43623 268 aa8.29□□□□□ -1.08
CLIP1-210ENST00000538120 LINC01356Q8N9X3 169 aa8.29□□□□□ -1.08
CLIP1-210ENST00000538120 CHCHD1Q96BP2 118 aaKnown RBP8.29□□□□□ -1.08
CLIP1-210ENST00000538120 SMAD5-AS1Q9Y6J3 95 aa8.29□□□□□ -1.08
CLIP1-210ENST00000538120 EPG5Q9HCE0 2579 aa8.29□□□□□ -1.08
CLIP1-210ENST00000538120 IGHV3OR16-8A0A075B7F1 116 aa8.28□□□□□ -1.08
CLIP1-210ENST00000538120 ZNF785A8K8V0 405 aa8.28□□□□□ -1.08
CLIP1-210ENST00000538120 CHEK1O14757 476 aa8.28□□□□□ -1.08
CLIP1-210ENST00000538120 APOHP02749 345 aaPredicted RBP8.28□□□□□ -1.08
CLIP1-210ENST00000538120 GATA3P23771 443 aa8.28□□□□□ -1.08
CLIP1-210ENST00000538120 SLC25A34Q6PIV7 304 aa8.28□□□□□ -1.08
CLIP1-210ENST00000538120 GOLT1AQ6ZVE7 132 aa8.28□□□□□ -1.08
CLIP1-210ENST00000538120 LYPD1Q8N2G4 141 aa8.28□□□□□ -1.08
CLIP1-210ENST00000538120 DUX5Q96PT3 197 aa8.28□□□□□ -1.08
CLIP1-210ENST00000538120 SCRT2Q9NQ03 307 aa8.28□□□□□ -1.08
CLIP1-210ENST00000538120 TRBV7-9A0A0J9YWB2 115 aa8.28□□□□□ -1.08
CLIP1-210ENST00000538120 IGF1P05019 195 aa8.28□□□□□ -1.08
CLIP1-210ENST00000538120 DGAT2L7PQ6IED9 249 aa8.28□□□□□ -1.08
CLIP1-210ENST00000538120 CLEC19AQ6UXS0 136 aa8.28□□□□□ -1.08
CLIP1-210ENST00000538120 PRNTQ86SH4 94 aa8.28□□□□□ -1.08
CLIP1-210ENST00000538120 Q86TA4 180 aa8.28□□□□□ -1.08
CLIP1-210ENST00000538120 MAPK1IP1LQ8NDC0 245 aa8.28□□□□□ -1.08
CLIP1-210ENST00000538120 RABAC1Q9UI14 185 aa8.28□□□□□ -1.08
CLIP1-210ENST00000538120 TRBV6-1A0A0K0K1D8 114 aa8.27□□□□□ -1.09
CLIP1-210ENST00000538120 CLPSL1A2RUU4 121 aa8.27□□□□□ -1.09
CLIP1-210ENST00000538120 EEF1AKMT3Q96AZ1 226 aa8.27□□□□□ -1.09
CLIP1-210ENST00000538120 ZNF492Q9P255 531 aa8.27□□□□□ -1.09
CLIP1-210ENST00000538120 LRRK2Q5S007 2527 aa8.27□□□□□ -1.09
CLIP1-210ENST00000538120 M0R3E3 92 aa8.27□□□□□ -1.09
CLIP1-210ENST00000538120 NCR2O95944 276 aa8.27□□□□□ -1.09
CLIP1-210ENST00000538120 IGHG2P01859 326 aa8.27□□□□□ -1.09
CLIP1-210ENST00000538120 ARMS2P0C7Q2 107 aa8.27□□□□□ -1.09
CLIP1-210ENST00000538120 BLCAPP62952 87 aa8.27□□□□□ -1.09
CLIP1-210ENST00000538120 PDE6HQ13956 83 aa8.27□□□□□ -1.09
CLIP1-210ENST00000538120 AMMECR1LQ6DCA0 310 aa8.27□□□□□ -1.09
CLIP1-210ENST00000538120 WFDC3Q8IUB2 231 aa8.27□□□□□ -1.09
CLIP1-210ENST00000538120 NDFIP1Q9BT67 221 aa8.27□□□□□ -1.09
CLIP1-210ENST00000538120 MAP1LC3CQ9BXW4 147 aa8.27□□□□□ -1.09
CLIP1-210ENST00000538120 TMEM191AQ9H0A3 160 aa8.27□□□□□ -1.09
CLIP1-210ENST00000538120 FAM208BQ5VWN6 2430 aa8.26□□□□□ -1.09
CLIP1-210ENST00000538120 TRBV7-1A0A0A6YYK4 115 aa8.26□□□□□ -1.09
CLIP1-210ENST00000538120 NPIPB6E9PJ23 425 aa8.26□□□□□ -1.09
CLIP1-210ENST00000538120 EIF4EBP3O60516 100 aaPredicted RBP8.26□□□□□ -1.09
CLIP1-210ENST00000538120 PPIFP30405 207 aaKnown RBP8.26□□□□□ -1.09
CLIP1-210ENST00000538120 SEC61GP60059 68 aa8.26□□□□□ -1.09
CLIP1-210ENST00000538120 ATP5G2Q06055 141 aa8.26□□□□□ -1.09
CLIP1-210ENST00000538120 FAM106AQ4KMX7 169 aa8.26□□□□□ -1.09
CLIP1-210ENST00000538120 LRRC75A-AS1Q8N1F1 130 aa8.26□□□□□ -1.09
CLIP1-210ENST00000538120 DEFB125Q8N687 156 aa8.26□□□□□ -1.09
CLIP1-210ENST00000538120 TMEM190Q8WZ59 177 aa8.26□□□□□ -1.09
CLIP1-210ENST00000538120 SELENOKQ9Y6D0 94 aa8.26□□□□□ -1.09
CLIP1-210ENST00000538120 MAP1AP78559 2803 aaPredicted RBP8.26□□□□□ -1.09
CLIP1-210ENST00000538120 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.26□□□□□ -1.09
CLIP1-210ENST00000538120 RPL7P18124 248 aaKnown RBP8.26□□□□□ -1.09
CLIP1-210ENST00000538120 RPS20P60866 119 aaKnown RBP8.26□□□□□ -1.09
CLIP1-210ENST00000538120 LOXL1Q08397 574 aaPredicted RBP8.26□□□□□ -1.09
CLIP1-210ENST00000538120 FAM162BQ5T6X4 162 aa8.26□□□□□ -1.09
CLIP1-210ENST00000538120 TMEM75Q8N9X5 138 aa8.26□□□□□ -1.09
CLIP1-210ENST00000538120 RAX2Q96IS3 184 aa8.26□□□□□ -1.09
CLIP1-210ENST00000538120 GFRA4Q9GZZ7 299 aa8.26□□□□□ -1.09
CLIP1-210ENST00000538120 TCTAP57738 103 aa8.25□□□□□ -1.09
CLIP1-210ENST00000538120 C5orf47Q569G3 176 aa8.25□□□□□ -1.09
CLIP1-210ENST00000538120 TRAV26-1A0A087WT03 109 aa8.25□□□□□ -1.09
CLIP1-210ENST00000538120 FAM223BA6NKX1 122 aa8.25□□□□□ -1.09
CLIP1-210ENST00000538120 BUB3O43684 328 aa8.25□□□□□ -1.09
CLIP1-210ENST00000538120 IGHG4P01861 327 aa8.25□□□□□ -1.09
CLIP1-210ENST00000538120 DEFB113Q30KQ7 82 aa8.25□□□□□ -1.09
CLIP1-210ENST00000538120 DEFB112Q30KQ8 113 aa8.25□□□□□ -1.09
CLIP1-210ENST00000538120 FAM223AQ8IWN6 122 aa8.25□□□□□ -1.09
CLIP1-210ENST00000538120 PSG8Q9UQ74 426 aa8.25□□□□□ -1.09
CLIP1-210ENST00000538120 TRAV8-6A0A0B4J262 113 aa8.24□□□□□ -1.09
CLIP1-210ENST00000538120 J3QLI3 93 aa8.24□□□□□ -1.09
CLIP1-210ENST00000538120 TRGV3P03979 118 aa8.24□□□□□ -1.09
CLIP1-210ENST00000538120 OR5AL1P0C617 328 aa8.24□□□□□ -1.09
CLIP1-210ENST00000538120 IGHV4-31P0DP07 118 aa8.24□□□□□ -1.09
CLIP1-210ENST00000538120 FXYD7P58549 80 aa8.24□□□□□ -1.09
CLIP1-210ENST00000538120 PSG9Q00887 426 aa8.24□□□□□ -1.09
CLIP1-210ENST00000538120 C2orf91Q6ZV80 131 aa8.24□□□□□ -1.09
CLIP1-210ENST00000538120 C16orf92Q96LL3 132 aa8.24□□□□□ -1.09
CLIP1-210ENST00000538120 CST9LQ9H4G1 147 aa8.24□□□□□ -1.09
CLIP1-210ENST00000538120 POLQO75417 2590 aa8.24□□□□□ -1.09
CLIP1-210ENST00000538120 LINC01545Q5VT33 79 aa8.24□□□□□ -1.09
CLIP1-210ENST00000538120 C12orf54Q6X4T0 127 aa8.24□□□□□ -1.09
CLIP1-210ENST00000538120 A0A1B0GUT8 65 aa8.23□□□□□ -1.09
CLIP1-210ENST00000538120 IGHV4-59P01825 116 aa8.23□□□□□ -1.09
CLIP1-210ENST00000538120 HLA-DMBP28068 263 aa8.23□□□□□ -1.09
CLIP1-210ENST00000538120 CRIP1P50238 77 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms