RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 H3BP45 60 aa5.23□□□□□ -1.57
CLIP1-206ENST00000535290 WRBO00258 174 aa5.23□□□□□ -1.57
CLIP1-206ENST00000535290 RAB3DO95716 219 aa5.23□□□□□ -1.57
CLIP1-206ENST00000535290 NMBP08949 121 aa5.23□□□□□ -1.57
CLIP1-206ENST00000535290 TBPP20226 339 aa5.23□□□□□ -1.57
CLIP1-206ENST00000535290 SELENOTP62341 195 aa5.23□□□□□ -1.57
CLIP1-206ENST00000535290 SPANXN5Q5MJ07 72 aa5.23□□□□□ -1.57
CLIP1-206ENST00000535290 WDR73Q6P4I2 378 aa5.23□□□□□ -1.57
CLIP1-206ENST00000535290 S100A7AQ86SG5 101 aa5.23□□□□□ -1.57
CLIP1-206ENST00000535290 CROCCP3Q8IVE0 287 aa5.23□□□□□ -1.57
CLIP1-206ENST00000535290 C9orf163Q8N9P6 203 aa5.23□□□□□ -1.57
CLIP1-206ENST00000535290 CNBD2Q96M20 576 aa5.23□□□□□ -1.57
CLIP1-206ENST00000535290 SPXQ9BT56 116 aa5.23□□□□□ -1.57
CLIP1-206ENST00000535290 COMMD3Q9UBI1 195 aa5.23□□□□□ -1.57
CLIP1-206ENST00000535290 MTFP1Q9UDX5 166 aa5.23□□□□□ -1.57
CLIP1-206ENST00000535290 GPR132Q9UNW8 380 aa5.23□□□□□ -1.57
CLIP1-206ENST00000535290 PHOX2AO14813 284 aa5.22□□□□□ -1.57
CLIP1-206ENST00000535290 APOA1P02647 267 aa5.22□□□□□ -1.57
CLIP1-206ENST00000535290 PTTG1IPP53801 180 aa5.22□□□□□ -1.57
CLIP1-206ENST00000535290 SLC38A11Q08AI6 406 aa5.22□□□□□ -1.57
CLIP1-206ENST00000535290 SURF2Q15527 256 aaPredicted RBP5.22□□□□□ -1.57
CLIP1-206ENST00000535290 TMEM183BQ1AE95 376 aa5.22□□□□□ -1.57
CLIP1-206ENST00000535290 C14orf177Q52M58 125 aa5.22□□□□□ -1.57
CLIP1-206ENST00000535290 TMEM183AQ8IXX5 376 aa5.22□□□□□ -1.57
CLIP1-206ENST00000535290 UBE2WQ96B02 151 aa5.22□□□□□ -1.57
CLIP1-206ENST00000535290 PRADC1Q9BSG0 188 aa5.22□□□□□ -1.57
CLIP1-206ENST00000535290 SRRQ9GZT4 340 aa5.22□□□□□ -1.57
CLIP1-206ENST00000535290 KLK12Q9UKR0 248 aa5.22□□□□□ -1.57
CLIP1-206ENST00000535290 RNF24Q9Y225 148 aa5.22□□□□□ -1.57
CLIP1-206ENST00000535290 KCNIP3Q9Y2W7 256 aa5.22□□□□□ -1.57
CLIP1-206ENST00000535290 KIF25-AS1Q9Y6Z4 181 aa5.22□□□□□ -1.57
CLIP1-206ENST00000535290 IGKV2-40A0A087WW87 121 aaPredicted RBP5.21□□□□□ -1.58
CLIP1-206ENST00000535290 SYNGR2O43760 224 aa5.21□□□□□ -1.58
CLIP1-206ENST00000535290 ZNF253O75346 499 aa5.21□□□□□ -1.58
CLIP1-206ENST00000535290 IGKV2D-40P01614 121 aaPredicted RBP5.21□□□□□ -1.58
CLIP1-206ENST00000535290 PRSS1P07477 247 aa5.21□□□□□ -1.58
CLIP1-206ENST00000535290 GABARAPL2P60520 117 aa5.21□□□□□ -1.58
CLIP1-206ENST00000535290 UBE2MP61081 183 aaKnown RBP5.21□□□□□ -1.58
CLIP1-206ENST00000535290 RPP30P78346 268 aaKnown RBP5.21□□□□□ -1.58
CLIP1-206ENST00000535290 CIRBPQ14011 172 aaKnown RBP5.21□□□□□ -1.58
CLIP1-206ENST00000535290 DPPA3Q6W0C5 159 aa5.21□□□□□ -1.58
CLIP1-206ENST00000535290 TMEM229BQ8NBD8 167 aa5.21□□□□□ -1.58
CLIP1-206ENST00000535290 OR51S1Q8NGJ8 323 aa5.21□□□□□ -1.58
CLIP1-206ENST00000535290 MRPL53Q96EL3 112 aaKnown RBP5.21□□□□□ -1.58
CLIP1-206ENST00000535290 ZC2HC1AQ96GY0 325 aa5.21□□□□□ -1.58
CLIP1-206ENST00000535290 CIB3Q96Q77 187 aaPredicted RBP5.21□□□□□ -1.58
CLIP1-206ENST00000535290 A0A087WYN8 130 aa5.2□□□□□ -1.58
CLIP1-206ENST00000535290 IGHV3-73A0A0B4J1V6 119 aa5.2□□□□□ -1.58
CLIP1-206ENST00000535290 TRBV6-4A0A1B0GX49 114 aa5.2□□□□□ -1.58
CLIP1-206ENST00000535290 FBLL1A6NHQ2 334 aaKnown RBP5.2□□□□□ -1.58
CLIP1-206ENST00000535290 USP17L23D6RBM5 183 aa5.2□□□□□ -1.58
CLIP1-206ENST00000535290 ANKRD65E5RJM6 399 aa5.2□□□□□ -1.58
CLIP1-206ENST00000535290 K7EPK0 472 aa5.2□□□□□ -1.58
CLIP1-206ENST00000535290 M0R2P5 195 aa5.2□□□□□ -1.58
CLIP1-206ENST00000535290 HPGDSO60760 199 aa5.2□□□□□ -1.58
CLIP1-206ENST00000535290 MED6O75586 246 aa5.2□□□□□ -1.58
CLIP1-206ENST00000535290 NDUFB4O95168 129 aa5.2□□□□□ -1.58
CLIP1-206ENST00000535290 OR10J4P0C629 311 aa5.2□□□□□ -1.58
CLIP1-206ENST00000535290 TAS2R19P59542 299 aa5.2□□□□□ -1.58
CLIP1-206ENST00000535290 RRAS2P62070 204 aaPredicted RBP5.2□□□□□ -1.58
CLIP1-206ENST00000535290 RHOHQ15669 191 aa5.2□□□□□ -1.58
CLIP1-206ENST00000535290 BAK1Q16611 211 aa5.2□□□□□ -1.58
CLIP1-206ENST00000535290 GUK1Q16774 197 aa5.2□□□□□ -1.58
CLIP1-206ENST00000535290 DGAT2L7PQ6IED9 249 aa5.2□□□□□ -1.58
CLIP1-206ENST00000535290 ATRAIDQ6UW56 229 aa5.2□□□□□ -1.58
CLIP1-206ENST00000535290 Q8TAT8 98 aa5.2□□□□□ -1.58
CLIP1-206ENST00000535290 RAB2BQ8WUD1 216 aa5.2□□□□□ -1.58
CLIP1-206ENST00000535290 DPH3Q96FX2 82 aa5.2□□□□□ -1.58
CLIP1-206ENST00000535290 C2orf50Q96LR7 162 aa5.2□□□□□ -1.58
CLIP1-206ENST00000535290 ZNF492Q9P255 531 aa5.2□□□□□ -1.58
CLIP1-206ENST00000535290 STRAPQ9Y3F4 350 aaKnown RBP5.2□□□□□ -1.58
CLIP1-206ENST00000535290 TRBV19A0A075B6N1 114 aa5.19□□□□□ -1.58
CLIP1-206ENST00000535290 C9orf118A6NHY6 69 aa5.19□□□□□ -1.58
CLIP1-206ENST00000535290 GOSR2O14653 212 aa5.19□□□□□ -1.58
CLIP1-206ENST00000535290 GNRH2O43555 120 aa5.19□□□□□ -1.58
CLIP1-206ENST00000535290 COX7A2P2O60397 106 aa5.19□□□□□ -1.58
CLIP1-206ENST00000535290 CHTF8P0CG12 524 aa5.19□□□□□ -1.58
CLIP1-206ENST00000535290 LSM3P62310 102 aaKnown RBP5.19□□□□□ -1.58
CLIP1-206ENST00000535290 RNF151Q2KHN1 245 aa5.19□□□□□ -1.58
CLIP1-206ENST00000535290 TMEM78Q5T7P6 136 aa5.19□□□□□ -1.58
CLIP1-206ENST00000535290 PXDC1Q5TGL8 231 aa5.19□□□□□ -1.58
CLIP1-206ENST00000535290 C10orf113Q5VZT2 155 aa5.19□□□□□ -1.58
CLIP1-206ENST00000535290 NIT1Q86X76 327 aa5.19□□□□□ -1.58
CLIP1-206ENST00000535290 EXOC3-AS1Q8N2X6 119 aa5.19□□□□□ -1.58
CLIP1-206ENST00000535290 YIPF6Q96EC8 236 aa5.19□□□□□ -1.58
CLIP1-206ENST00000535290 OR51M1Q9H341 326 aa5.19□□□□□ -1.58
CLIP1-206ENST00000535290 TRGV11A0A075B6L2 103 aa5.18□□□□□ -1.58
CLIP1-206ENST00000535290 C5orf51A6NDU8 294 aa5.18□□□□□ -1.58
CLIP1-206ENST00000535290 AGPAT2O15120 278 aa5.18□□□□□ -1.58
CLIP1-206ENST00000535290 POLR2GP62487 172 aaKnown RBP eCLIP5.18□□□□□ -1.58
CLIP1-206ENST00000535290 VAMP2P63027 116 aa5.18□□□□□ -1.58
CLIP1-206ENST00000535290 PRR3P79522 188 aaKnown RBP5.18□□□□□ -1.58
CLIP1-206ENST00000535290 CFAP126Q5VTH2 177 aa5.18□□□□□ -1.58
CLIP1-206ENST00000535290 REG3GQ6UW15 175 aa5.18□□□□□ -1.58
CLIP1-206ENST00000535290 ZNF546Q86UE3 836 aa5.18□□□□□ -1.58
CLIP1-206ENST00000535290 ARL6IP6Q8N6S5 226 aa5.18□□□□□ -1.58
CLIP1-206ENST00000535290 NPVFQ9HCQ7 196 aa5.18□□□□□ -1.58
CLIP1-206ENST00000535290 Q9UF83 564 aa5.18□□□□□ -1.58
CLIP1-206ENST00000535290 GAGE12JA6NER3 117 aa5.17□□□□□ -1.58
CLIP1-206ENST00000535290 DISC1C4P0D8 188 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms