RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 OR11H6Q8NGC7 330 aa14.37□□□□□ -0.11
SFSWAP-203ENST00000535236 ABCA1O95477 2261 aa14.37□□□□□ -0.11
SFSWAP-203ENST00000535236 TRBV20-1A0A075B6N2 111 aa14.37□□□□□ -0.11
SFSWAP-203ENST00000535236 DEFB113Q30KQ7 82 aa14.37□□□□□ -0.11
SFSWAP-203ENST00000535236 THSD7BQ9C0I4 1608 aa14.37□□□□□ -0.11
SFSWAP-203ENST00000535236 DIDO1Q9BTC0 2240 aaKnown RBP14.37□□□□□ -0.11
SFSWAP-203ENST00000535236 A0A1B0GUS0 222 aa14.37□□□□□ -0.11
SFSWAP-203ENST00000535236 K7EM74 188 aa14.37□□□□□ -0.11
SFSWAP-203ENST00000535236 YLPM1P49750 1951 aaKnown RBP14.37□□□□□ -0.11
SFSWAP-203ENST00000535236 TRAV13-2A0A0B4J235 113 aa14.37□□□□□ -0.11
SFSWAP-203ENST00000535236 ZNF664Q8N3J9 261 aa14.36□□□□□ -0.11
SFSWAP-203ENST00000535236 C9orf66Q5T8R8 295 aa14.36□□□□□ -0.11
SFSWAP-203ENST00000535236 A8MWP6 167 aa14.36□□□□□ -0.11
SFSWAP-203ENST00000535236 SHISA9B4DS77 424 aa14.36□□□□□ -0.11
SFSWAP-203ENST00000535236 ADCYAP1P18509 176 aa14.36□□□□□ -0.11
SFSWAP-203ENST00000535236 U3KQE9 123 aa14.36□□□□□ -0.11
SFSWAP-203ENST00000535236 KIAA2026Q5HYC2 2103 aa14.36□□□□□ -0.11
SFSWAP-203ENST00000535236 NDUFS7O75251 213 aa14.36□□□□□ -0.11
SFSWAP-203ENST00000535236 Q9HAA7 133 aa14.36□□□□□ -0.11
SFSWAP-203ENST00000535236 SMIM27A0A1W2PRY6 76 aa14.35□□□□□ -0.11
SFSWAP-203ENST00000535236 IGHV2-70P01814 119 aa14.35□□□□□ -0.11
SFSWAP-203ENST00000535236 XCL1P47992 114 aa14.35□□□□□ -0.11
SFSWAP-203ENST00000535236 RNASE13Q5GAN3 156 aaKnown RBP14.35□□□□□ -0.11
SFSWAP-203ENST00000535236 PYGO2Q9BRQ0 406 aa14.35□□□□□ -0.11
SFSWAP-203ENST00000535236 SIGLEC8Q9NYZ4 499 aa14.35□□□□□ -0.11
SFSWAP-203ENST00000535236 V9GYV3 84 aa14.35□□□□□ -0.11
SFSWAP-203ENST00000535236 NPYP01303 97 aa14.35□□□□□ -0.11
SFSWAP-203ENST00000535236 C1orf147Q96MC9 270 aaPredicted RBP14.35□□□□□ -0.11
SFSWAP-203ENST00000535236 TP53BP1Q12888 1972 aaPredicted RBP14.34□□□□□ -0.11
SFSWAP-203ENST00000535236 C20orf78Q9BR46 151 aa14.34□□□□□ -0.11
SFSWAP-203ENST00000535236 WISP1O95388 367 aa14.34□□□□□ -0.11
SFSWAP-203ENST00000535236 FGF6P10767 208 aa14.34□□□□□ -0.11
SFSWAP-203ENST00000535236 FXYD5Q96DB9 178 aa14.34□□□□□ -0.11
SFSWAP-203ENST00000535236 DEFB136Q30KP8 78 aa14.34□□□□□ -0.11
SFSWAP-203ENST00000535236 Q6ZQT7 251 aa14.34□□□□□ -0.11
SFSWAP-203ENST00000535236 IGLV2-23P01705 113 aa14.34□□□□□ -0.11
SFSWAP-203ENST00000535236 ZNF726P1Q15940 193 aa14.34□□□□□ -0.11
SFSWAP-203ENST00000535236 F6UB75 175 aa14.33□□□□□ -0.11
SFSWAP-203ENST00000535236 ZNF491Q8N8L2 437 aa14.33□□□□□ -0.11
SFSWAP-203ENST00000535236 PKIGQ9Y2B9 76 aa14.33□□□□□ -0.11
SFSWAP-203ENST00000535236 RIF1Q5UIP0 2472 aaKnown RBP14.33□□□□□ -0.11
SFSWAP-203ENST00000535236 GRNP28799 593 aaKnown RBP14.33□□□□□ -0.12
SFSWAP-203ENST00000535236 MRPL35Q9NZE8 188 aaKnown RBP14.33□□□□□ -0.12
SFSWAP-203ENST00000535236 USF3Q68DE3 2245 aa14.33□□□□□ -0.12
SFSWAP-203ENST00000535236 UTF1Q5T230 341 aa14.33□□□□□ -0.12
SFSWAP-203ENST00000535236 PHF3Q92576 2039 aaKnown RBP14.32□□□□□ -0.12
SFSWAP-203ENST00000535236 PI4KAP42356 2102 aa14.32□□□□□ -0.12
SFSWAP-203ENST00000535236 LGALS9BQ3B8N2 356 aa14.32□□□□□ -0.12
SFSWAP-203ENST00000535236 LGALS9CQ6DKI2 356 aa14.32□□□□□ -0.12
SFSWAP-203ENST00000535236 POLR3KQ9Y2Y1 108 aaPredicted RBP14.32□□□□□ -0.12
SFSWAP-203ENST00000535236 ROS1P08922 2347 aa14.32□□□□□ -0.12
SFSWAP-203ENST00000535236 C1orf43Q9BWL3 253 aa14.32□□□□□ -0.12
SFSWAP-203ENST00000535236 C8orf31Q8N9H6 132 aa14.32□□□□□ -0.12
SFSWAP-203ENST00000535236 PIFOQ8TCI5 191 aa14.32□□□□□ -0.12
SFSWAP-203ENST00000535236 SLX1AQ9BQ83 275 aa14.32□□□□□ -0.12
SFSWAP-203ENST00000535236 CFHR4Q92496 578 aa14.31□□□□□ -0.12
SFSWAP-203ENST00000535236 F8VRH5 84 aa14.31□□□□□ -0.12
SFSWAP-203ENST00000535236 J3QQQ9 107 aa14.31□□□□□ -0.12
SFSWAP-203ENST00000535236 GNRH2O43555 120 aa14.31□□□□□ -0.12
SFSWAP-203ENST00000535236 COX11Q9Y6N1 276 aa14.31□□□□□ -0.12
SFSWAP-203ENST00000535236 ZNF124Q15973 351 aa14.31□□□□□ -0.12
SFSWAP-203ENST00000535236 DOCK7Q96N67 2140 aa14.31□□□□□ -0.12
SFSWAP-203ENST00000535236 C9JQL5 133 aa14.31□□□□□ -0.12
SFSWAP-203ENST00000535236 CRYGCP07315 174 aa14.31□□□□□ -0.12
SFSWAP-203ENST00000535236 FOXE3Q13461 319 aa14.31□□□□□ -0.12
SFSWAP-203ENST00000535236 hADV29S1A0JD25 119 aa14.31□□□□□ -0.12
SFSWAP-203ENST00000535236 GP9P14770 177 aa14.31□□□□□ -0.12
SFSWAP-203ENST00000535236 CTSZQ9UBR2 303 aa14.31□□□□□ -0.12
SFSWAP-203ENST00000535236 TEX48A0A1B0GUV7 120 aa14.3□□□□□ -0.12
SFSWAP-203ENST00000535236 NDUFS5O43920 106 aa14.3□□□□□ -0.12
SFSWAP-203ENST00000535236 HLA-DMBP28068 263 aa14.3□□□□□ -0.12
SFSWAP-203ENST00000535236 DYNAPQ8N1N2 210 aa14.3□□□□□ -0.12
SFSWAP-203ENST00000535236 PRO1854Q9UHT4 67 aa14.3□□□□□ -0.12
SFSWAP-203ENST00000535236 C9orf153Q5TBE3 101 aa14.3□□□□□ -0.12
SFSWAP-203ENST00000535236 IGHG4P01861 327 aa14.29□□□□□ -0.12
SFSWAP-203ENST00000535236 SLURP1P55000 103 aa14.29□□□□□ -0.12
SFSWAP-203ENST00000535236 APRG1Q8IVJ8 170 aa14.29□□□□□ -0.12
SFSWAP-203ENST00000535236 IGHV4-61A0A0C4DH41 118 aa14.29□□□□□ -0.12
SFSWAP-203ENST00000535236 CENPVL3A0A0U1RRI6 287 aa14.29□□□□□ -0.12
SFSWAP-203ENST00000535236 TCF20Q9UGU0 1960 aaKnown RBP14.29□□□□□ -0.12
SFSWAP-203ENST00000535236 ANK1P16157 1881 aa14.29□□□□□ -0.12
SFSWAP-203ENST00000535236 RPL18AQ02543 176 aaKnown RBP14.28□□□□□ -0.12
SFSWAP-203ENST00000535236 POU2AF1Q16633 256 aa14.28□□□□□ -0.12
SFSWAP-203ENST00000535236 RSPO1Q2MKA7 263 aaPredicted RBP14.28□□□□□ -0.12
SFSWAP-203ENST00000535236 TICRRQ7Z2Z1 1910 aa14.28□□□□□ -0.12
SFSWAP-203ENST00000535236 C17orf77Q96MU5 243 aa14.28□□□□□ -0.12
SFSWAP-203ENST00000535236 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.28□□□□□ -0.12
SFSWAP-203ENST00000535236 TRAV12-1A0A0B4J245 112 aa14.28□□□□□ -0.12
SFSWAP-203ENST00000535236 IGKV2-29A2NJV5 120 aaPredicted RBP14.28□□□□□ -0.12
SFSWAP-203ENST00000535236 C20orf144Q9BQM9 153 aa14.28□□□□□ -0.12
SFSWAP-203ENST00000535236 PRB1P04280 392 aa14.28□□□□□ -0.12
SFSWAP-203ENST00000535236 IGHV4-30-2A0A087WSY4 118 aa14.28□□□□□ -0.12
SFSWAP-203ENST00000535236 CCL18P55774 89 aa14.28□□□□□ -0.12
SFSWAP-203ENST00000535236 DEFB105AQ8NG35 78 aa14.28□□□□□ -0.12
SFSWAP-203ENST00000535236 AGPAT4-IT1Q9H0P7 198 aa14.28□□□□□ -0.12
SFSWAP-203ENST00000535236 DOCK10Q96BY6 2186 aa14.28□□□□□ -0.12
SFSWAP-203ENST00000535236 BUB3O43684 328 aa14.27□□□□□ -0.12
SFSWAP-203ENST00000535236 LTAP01374 205 aa14.27□□□□□ -0.12
SFSWAP-203ENST00000535236 ICOSQ9Y6W8 199 aa14.27□□□□□ -0.12
SFSWAP-203ENST00000535236 FNDC1Q4ZHG4 1894 aaPredicted RBP14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms