RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	MEIG1	Q5JSS6	88 aa		2.92	□□□□□ -1.94
ATM-223	ENST00000533979	UNQ9165/PRO28630	Q6UXU0	137 aa		2.92	□□□□□ -1.94
ATM-223	ENST00000533979	MKX	Q8IYA7	352 aa		2.92	□□□□□ -1.94
ATM-223	ENST00000533979	DEFB106A	Q8N104	65 aa		2.92	□□□□□ -1.94
ATM-223	ENST00000533979	TTC9C	Q8N5M4	171 aa		2.92	□□□□□ -1.94
ATM-223	ENST00000533979	CCL13	Q99616	98 aa		2.92	□□□□□ -1.94
ATM-223	ENST00000533979	RNF5	Q99942	180 aa		2.92	□□□□□ -1.94
ATM-223	ENST00000533979	ADAT1	Q9BUB4	502 aa	Known RBP	2.92	□□□□□ -1.94
ATM-223	ENST00000533979	TCEAL2	Q9H3H9	227 aa	Predicted RBP	2.92	□□□□□ -1.94
ATM-223	ENST00000533979	TUBA4B	Q9H853	241 aa		2.92	□□□□□ -1.94
ATM-223	ENST00000533979	LINC00574	Q9H8X3	128 aa		2.92	□□□□□ -1.94
ATM-223	ENST00000533979	SMCO4	Q9NRQ5	59 aa		2.92	□□□□□ -1.94
ATM-223	ENST00000533979	ZNF586	Q9NXT0	402 aa		2.92	□□□□□ -1.94
ATM-223	ENST00000533979	IER3IP1	Q9Y5U9	82 aa		2.92	□□□□□ -1.94
ATM-223	ENST00000533979	CSPG4	Q6UVK1	2322 aa		2.92	□□□□□ -1.94
ATM-223	ENST00000533979	APC	P25054	2843 aa		2.92	□□□□□ -1.94
ATM-223	ENST00000533979	TRPM6	Q9BX84	2022 aa		2.92	□□□□□ -1.94
ATM-223	ENST00000533979	JMJD1C	Q15652	2540 aa		2.91	□□□□□ -1.94
ATM-223	ENST00000533979	TRBV19	A0A075B6N1	114 aa		2.91	□□□□□ -1.94
ATM-223	ENST00000533979	TRAV4	A0A0B4J268	109 aa		2.91	□□□□□ -1.94
ATM-223	ENST00000533979		A0A1W2PRS3	328 aa		2.91	□□□□□ -1.94
ATM-223	ENST00000533979	COLCA2	A8K830	154 aa		2.91	□□□□□ -1.94
ATM-223	ENST00000533979	IGLL5	B9A064	214 aa		2.91	□□□□□ -1.94
ATM-223	ENST00000533979	ZNF670-ZNF695	F2Z2N8	137 aa		2.91	□□□□□ -1.94
ATM-223	ENST00000533979	FNDC10	F2Z333	226 aa		2.91	□□□□□ -1.94
ATM-223	ENST00000533979		H7BYZ3	331 aa		2.91	□□□□□ -1.94
ATM-223	ENST00000533979		J3QQQ9	107 aa		2.91	□□□□□ -1.94
ATM-223	ENST00000533979	OR2T1	O43869	369 aa		2.91	□□□□□ -1.94
ATM-223	ENST00000533979	NCR2	O95944	276 aa		2.91	□□□□□ -1.94
ATM-223	ENST00000533979	HRAS	P01112	189 aa		2.91	□□□□□ -1.94
ATM-223	ENST00000533979	KRAS	P01116	189 aa		2.91	□□□□□ -1.94
ATM-223	ENST00000533979	LHB	P01229	141 aa		2.91	□□□□□ -1.94
ATM-223	ENST00000533979	SPINK8	P0C7L1	97 aa		2.91	□□□□□ -1.94
ATM-223	ENST00000533979	LINC00869	P0C866	280 aa		2.91	□□□□□ -1.94
ATM-223	ENST00000533979	ZNF728	P0DKX0	622 aa		2.91	□□□□□ -1.94
ATM-223	ENST00000533979	PPIB	P23284	216 aa	Known RBP	2.91	□□□□□ -1.94
ATM-223	ENST00000533979	BTG2	P78543	158 aa		2.91	□□□□□ -1.94
ATM-223	ENST00000533979	BSPH1	Q075Z2	132 aa		2.91	□□□□□ -1.94
ATM-223	ENST00000533979	DHRS2	Q13268	280 aa		2.91	□□□□□ -1.94
ATM-223	ENST00000533979	TMEM244	Q5VVB8	128 aa		2.91	□□□□□ -1.94
ATM-223	ENST00000533979		Q5XG85	94 aa		2.91	□□□□□ -1.94
ATM-223	ENST00000533979	AMMECR1L	Q6DCA0	310 aa		2.91	□□□□□ -1.94
ATM-223	ENST00000533979	FOXI2	Q6ZQN5	318 aa		2.91	□□□□□ -1.94
ATM-223	ENST00000533979	ARPIN	Q7Z6K5	226 aa		2.91	□□□□□ -1.94
ATM-223	ENST00000533979	TEX29	Q8N6K0	151 aa		2.91	□□□□□ -1.94
ATM-223	ENST00000533979	OR4C16	Q8NGL9	310 aa		2.91	□□□□□ -1.94
ATM-223	ENST00000533979	MAGOHB	Q96A72	148 aa	Known RBP	2.91	□□□□□ -1.94
ATM-223	ENST00000533979	CARD19	Q96LW7	228 aa		2.91	□□□□□ -1.94
ATM-223	ENST00000533979	NMNAT3	Q96T66	252 aa		2.91	□□□□□ -1.94
ATM-223	ENST00000533979	NAA38	Q9BRA0	125 aa	Known RBP	2.91	□□□□□ -1.94
ATM-223	ENST00000533979	TMEM191A	Q9H0A3	160 aa		2.91	□□□□□ -1.94
ATM-223	ENST00000533979	BET1L	Q9NYM9	111 aa		2.91	□□□□□ -1.94
ATM-223	ENST00000533979	TAAR3P	Q9P1P4	343 aa		2.91	□□□□□ -1.94
ATM-223	ENST00000533979	RPUSD1	Q9UJJ7	312 aa	Known RBP	2.91	□□□□□ -1.94
ATM-223	ENST00000533979	NCKAP5	O14513	1909 aa		2.91	□□□□□ -1.94
ATM-223	ENST00000533979	CSMD1	Q96PZ7	3565 aa		2.9	□□□□□ -1.94
ATM-223	ENST00000533979	TRDV1	A0A1B0GX56	115 aa		2.9	□□□□□ -1.95
ATM-223	ENST00000533979		G3V3Q6	166 aa		2.9	□□□□□ -1.95
ATM-223	ENST00000533979	CCDC179	H3BU77	68 aa		2.9	□□□□□ -1.95
ATM-223	ENST00000533979	CD7	P09564	240 aa		2.9	□□□□□ -1.95
ATM-223	ENST00000533979	CATR1	Q13166	79 aa		2.9	□□□□□ -1.95
ATM-223	ENST00000533979	EIF3I	Q13347	325 aa	Known RBP	2.9	□□□□□ -1.95
ATM-223	ENST00000533979	TMEM14EP	Q6UXP3	125 aa		2.9	□□□□□ -1.95
ATM-223	ENST00000533979	IZUMO2	Q6UXV1	221 aa		2.9	□□□□□ -1.95
ATM-223	ENST00000533979	ADM2	Q7Z4H4	148 aa		2.9	□□□□□ -1.95
ATM-223	ENST00000533979	SLC22A24	Q8N4F4	322 aa		2.9	□□□□□ -1.95
ATM-223	ENST00000533979	OR5D14	Q8NGL3	314 aa		2.9	□□□□□ -1.95
ATM-223	ENST00000533979	SGMS2	Q8NHU3	365 aa		2.9	□□□□□ -1.95
ATM-223	ENST00000533979	SLC25A40	Q8TBP6	338 aa		2.9	□□□□□ -1.95
ATM-223	ENST00000533979	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	2.9	□□□□□ -1.95
ATM-223	ENST00000533979	FRZB	Q92765	325 aa		2.9	□□□□□ -1.95
ATM-223	ENST00000533979	RMI2	Q96E14	147 aa		2.9	□□□□□ -1.95
ATM-223	ENST00000533979	IGF2BP2-AS1	Q96M15	143 aa		2.9	□□□□□ -1.95
ATM-223	ENST00000533979	SLC25A21	Q9BQT8	299 aa	Predicted RBP	2.9	□□□□□ -1.95
ATM-223	ENST00000533979	MRPL32	Q9BYC8	188 aa	Known RBP	2.9	□□□□□ -1.95
ATM-223	ENST00000533979	DPY30	Q9C005	99 aa		2.9	□□□□□ -1.95
ATM-223	ENST00000533979	COMMD5	Q9GZQ3	224 aa		2.9	□□□□□ -1.95
ATM-223	ENST00000533979	RPRM	Q9NS64	109 aa		2.9	□□□□□ -1.95
ATM-223	ENST00000533979	TVP23B	Q9NYZ1	205 aa		2.9	□□□□□ -1.95
ATM-223	ENST00000533979	PLXNA2	O75051	1894 aa		2.9	□□□□□ -1.95
ATM-223	ENST00000533979	RP1L1	Q8IWN7	2480 aa	Predicted RBP	2.9	□□□□□ -1.95
ATM-223	ENST00000533979	IGLV4-69	A0A075B6H9	119 aa		2.89	□□□□□ -1.95
ATM-223	ENST00000533979		A0A0D9SEW6	157 aa		2.89	□□□□□ -1.95
ATM-223	ENST00000533979		A8MUN3	132 aa		2.89	□□□□□ -1.95
ATM-223	ENST00000533979	COL6A5	A8TX70	2615 aa		2.89	□□□□□ -1.95
ATM-223	ENST00000533979	LST1	O00453	97 aa		2.89	□□□□□ -1.95
ATM-223	ENST00000533979	COX7A2L	O14548	114 aa		2.89	□□□□□ -1.95
ATM-223	ENST00000533979	LYZL6	O75951	148 aa		2.89	□□□□□ -1.95
ATM-223	ENST00000533979		P0DMU3	169 aa		2.89	□□□□□ -1.95
ATM-223	ENST00000533979	FAM231A	P0DMU4	169 aa		2.89	□□□□□ -1.95
ATM-223	ENST00000533979	FAM231C	P0DMU5	169 aa		2.89	□□□□□ -1.95
ATM-223	ENST00000533979	GZMB	P10144	247 aa		2.89	□□□□□ -1.95
ATM-223	ENST00000533979	ZNF32	P17041	273 aa		2.89	□□□□□ -1.95
ATM-223	ENST00000533979	ZNF93	P35789	620 aa	Predicted RBP	2.89	□□□□□ -1.95
ATM-223	ENST00000533979	TMBIM6	P55061	237 aa		2.89	□□□□□ -1.95
ATM-223	ENST00000533979	FOXA1	P55317	472 aa		2.89	□□□□□ -1.95
ATM-223	ENST00000533979	RP1	P56715	2156 aa		2.89	□□□□□ -1.95
ATM-223	ENST00000533979	HES1	Q14469	280 aa		2.89	□□□□□ -1.95
ATM-223	ENST00000533979	CST6	Q15828	149 aa		2.89	□□□□□ -1.95
ATM-223	ENST00000533979	ZNF141	Q15928	474 aa		2.89	□□□□□ -1.95

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms